Guide to the Human Genome
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Name: HES6 Sequence: fasta or formatted (222aa) NCBI GI: 218751874
Description:

hairy and enhancer of split 6 isoform b

Referenced in:

Notch Pathway
Helix-Loop-Helix Transcription Factors

Other entries for this name:
alt prot [224aa] hairy and enhancer of split 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         31           2
 C cysteine            1.4          3           1
 D aspartate           5.0         11           2
 E glutamate          10.4         23           2
 F phenylalanine       1.4          3           1
 G glycine             9.0         20           2
 H histidine           1.4          3           1
 I isoleucine          2.3          5           1
 K lysine              2.3          5           2
 L leucine            11.3         25           3
 M methionine          1.4          3           1
 N asparagine          1.4          3           1
 P proline             9.0         20           2
 Q glutamine           4.1          9           1
 R arginine            9.9         22           2
 S serine              5.9         13           2
 T threonine           3.2          7           2
 V valine              5.0         11           1
 W tryptophan          1.8          4           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hairy and enhancer of split 6 isoform b 
HES6                  0.988   hairy and enhancer of split 6 isoform a 
HES1                  0.175   hairy and enhancer of split 1 
HES4                  0.152   hairy and enhancer of split 4 isoform 1 
HES4                  0.152   hairy and enhancer of split 4 isoform 2 
HES2                  0.123   hairy and enhancer of split homolog 2 
HEY1                  0.095   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY1                  0.090   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY2                  0.090   hairy/enhancer-of-split related with YRPW motif 2 [Ho...
HES7                  0.073   hairy and enhancer of split 7 
HEYL                  0.064   hairy/enhancer-of-split related with YRPW motif-like ...
HES5                  0.064   hairy and enhancer of split 5 
HELT                  0.064   HES/HEY-like transcription factor 
HES3                  0.055   hairy and enhancer of split 3 
BHLHE40               0.052   basic helix-loop-helix family, member e40 
BHLHE41               0.040   basic helix-loop-helix domain containing, class B, 3...
SREBF1                0.036   sterol regulatory element binding transcription fact...
SREBF1                0.036   sterol regulatory element binding transcription fact...
TNKS1BP1              0.028   tankyrase 1-binding protein 1 
COL15A1               0.026   alpha 1 type XV collagen precursor 
COL5A1                0.026   alpha 1 type V collagen preproprotein 
MAPK8IP2              0.026   mitogen-activated protein kinase 8 interacting protei...
MAPK8IP2              0.026   mitogen-activated protein kinase 8 interacting protei...
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein LOC80164 
KHSRP                 0.024   KH-type splicing regulatory protein 
SREBF2                0.024   sterol regulatory element-binding transcription fact...
ZFPM1                 0.024   zinc finger protein, multitype 1 
LOC645602             0.024   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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