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Search of human proteins with 21735492
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21735492 protein phosphatase 1, regulatory (inhibitor)
subunit 1B isoform 1 [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 418 e-117
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 345 1e-95
gi|122937386 protein phosphatase 1, regulatory (inhibitor) subun... 77 1e-14
gi|155030238 protein phosphatase 1, regulatory (inhibitor) subun... 63 2e-10
gi|17975763 myelin transcription factor 1 [Homo sapiens] 51 6e-07
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 49 2e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 49 3e-06
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 49 4e-06
gi|118600967 shroom family member 4 [Homo sapiens] 48 7e-06
gi|4504487 histidine rich calcium binding protein precursor [Hom... 47 9e-06
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 47 1e-05
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 47 1e-05
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 46 3e-05
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 3e-05
gi|21735415 centromere protein B [Homo sapiens] 45 3e-05
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 45 3e-05
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 45 3e-05
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 45 4e-05
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 45 6e-05
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 45 6e-05
gi|115529449 upstream binding transcription factor, RNA polymera... 45 6e-05
gi|115529451 upstream binding transcription factor, RNA polymera... 45 6e-05
gi|7657671 upstream binding transcription factor, RNA polymerase... 45 6e-05
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 44 7e-05
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 44 7e-05
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 418 bits (1075), Expect = e-117
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGE 60
MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGE
Sbjct: 1 MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGE 60
Query: 61 GHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREE 120
GHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREE
Sbjct: 61 GHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREE 120
Query: 121 DEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSED 180
DEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSED
Sbjct: 121 DEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSED 180
Query: 181 QVEDPALSEPGEEPQRPSPSEPGT 204
QVEDPALSEPGEEPQRPSPSEPGT
Sbjct: 181 QVEDPALSEPGEEPQRPSPSEPGT 204
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 345 bits (886), Expect = 1e-95
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 37 MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNL 96
MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNL
Sbjct: 1 MLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNL 60
Query: 97 NENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCG 156
NENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCG
Sbjct: 61 NENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCG 120
Query: 157 QGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT 204
QGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT
Sbjct: 121 QGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT 168
>gi|122937386 protein phosphatase 1, regulatory (inhibitor) subunit
1C [Homo sapiens]
Length = 109
Score = 76.6 bits (187), Expect = 1e-14
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 1 MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGE 60
M+P KKIQF+VP SQ+ P E IR+RRPTPA L L+EH+ PE + GE
Sbjct: 1 MEPNSPKKIQFAVPVFQSQIAPEAAEQIRKRRPTPASLVILNEHNPPEIDDKRGPNTQGE 60
Query: 61 GHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRE 113
+ K+ YTPP++K V+ + NE+ EEE+ E E
Sbjct: 61 LQNASPKQRKQSVYTPPTIKGVKH--------LKGQNESAFPEEEEGTNEREE 105
>gi|155030238 protein phosphatase 1, regulatory (inhibitor) subunit
1A [Homo sapiens]
Length = 171
Score = 62.8 bits (151), Expect = 2e-10
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 7 KKIQFSVPAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPE--EEASPHQRASGEGHHL 64
+KIQF+VP LDP E IRRRRPTPA L S+ SSPE E+ P+ HL
Sbjct: 8 RKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEIDEDRIPNP-------HL 60
Query: 65 KS------KRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPR 118
KS ++ P++K +Q + E HL E + + E E R G P
Sbjct: 61 KSTLAMSPRQRKKMTRITPTMKELQMMVEHHLGQQQQGEEPEGAAESTGTQESRPPGIPD 120
Query: 119 EEDE 122
E E
Sbjct: 121 TEVE 124
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 51.2 bits (121), Expect = 6e-07
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
SH + E + EEEDE E E EE+EEEEE++EEEEEEE+ +A + ++
Sbjct: 256 SHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQE 315
Query: 148 ----SAGQKTTCGQGLEGPWERP 166
++ QK +G E P +P
Sbjct: 316 DTSHTSAQKAPELRGPESPSPKP 338
Score = 47.0 bits (110), Expect = 1e-05
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 76 PPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEE 135
P SL+ S + I + E EEE+E E + EE+EEEEE++EEEEEEE
Sbjct: 237 PQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296
Query: 136 DSQAE 140
+ + E
Sbjct: 297 EEEEE 301
Score = 47.0 bits (110), Expect = 1e-05
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 93 ISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAE-----VLKVIRQ 147
+S+ E++ EEE+E E E EE+EEEEE++EEEEEEE+ + E VI Q
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 148 SAGQKTTCGQG--LEGPWERPPPLDE 171
T+ + L GP E P P E
Sbjct: 315 EDTSHTSAQKAPELRGP-ESPSPKPE 339
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 49.3 bits (116), Expect = 2e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 79 LKAVQRIAESHL------------QSISNLNENQASEEEDELGELRELGYPREEDEEEEE 126
L V+R+ SH+ Q +N E + EEEDE E + EE+EEEEE
Sbjct: 702 LNRVRRVGFSHMLLTTPQVPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEE 761
Query: 127 DDEEEEEEEDSQAEV 141
++EEEEEEE++ A V
Sbjct: 762 EEEEEEEEEEAAAAV 776
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 48.9 bits (115), Expect = 3e-06
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 76 PPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEE--EE 133
PP+L E L I+ + ++ EEE+E E E EED EEEE+DEEE EE
Sbjct: 871 PPAL-------EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEE 923
Query: 134 EEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESE--RDGGSEDQVEDPALSEPG 191
EE+ + E + + G+ + E E L+E E G + +VE+ A P
Sbjct: 924 EEEEEEEFEEEFEEEEGELEE--EEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPT 981
Query: 192 EEPQRPSPSEP 202
P P P P
Sbjct: 982 LPPALPPPESP 992
Score = 43.1 bits (100), Expect = 2e-04
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 87 ESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIR 146
E + + E E E+E GEL E EE+E+EEE++E EE E+ +
Sbjct: 918 EEYFEEEEEEEEEFEEEFEEEEGELEE----EEEEEDEEEEEELEEVEDLEFGTAGGEVE 973
Query: 147 QSAGQKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEP 202
+ A T L P P E E + G +VE EPG E +R + + P
Sbjct: 974 EGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVE-----EPGTEEERGADTAP 1024
Score = 41.2 bits (95), Expect = 6e-04
Identities = 43/149 (28%), Positives = 56/149 (37%), Gaps = 42/149 (28%)
Query: 97 NENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKV--------IRQS 148
+E + EEE+E E E + EE E EEE++EE+EEEE+ EV + + +
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEG 975
Query: 149 AGQKTTCGQGLEGPWERPP------------------PLDESER---------------D 175
A T L P E PP P E ER
Sbjct: 976 APPPPTLPPALPPP-ESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQ 1034
Query: 176 GGSEDQVEDPALSEPGEEPQRPSPSEPGT 204
G E + E PA P +E PS P T
Sbjct: 1035 GEVEREGESPAAGPPPQELVEEEPSAPPT 1063
Score = 28.9 bits (63), Expect = 3.2
Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 33/144 (22%)
Query: 14 PAPPSQLDPRQVEMIRRRRPTPAMLFRLSEHSSPEE-----------EASPHQRASGEGH 62
PA P P +V+ P P +L + E + EE EA P Q GE
Sbjct: 984 PALPPPESPPKVQP--EPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQ---GE-- 1036
Query: 63 HLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDE 122
++ + +P A PP Q + E + L EEE E G + P E
Sbjct: 1037 -VEREGESPAAGPPP-----QELVEEEPSAPPTL-----LEEETEDGSDKVQPPPETPAE 1085
Query: 123 EEEEDDEE----EEEEEDSQAEVL 142
EE E + E +E+E+D A +L
Sbjct: 1086 EEMETETEAEALQEKEQDDTAAML 1109
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 48.5 bits (114), Expect = 4e-06
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 40 RLSEHSS---PEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNL 96
RL E +S EE+ RA+ K + N ++P S L +S
Sbjct: 1010 RLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPESRPVTGE--RGQLLELSKE 1067
Query: 97 NENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQA 139
+ + EEEDE E E EEDEEEEE++EEEEEEE+ Q+
Sbjct: 1068 SSEEEEEEEDEEEEEEE--EEEEEDEEEEEEEEEEEEEENIQS 1108
Score = 46.6 bits (109), Expect = 1e-05
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 39 FRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNE 98
F+L+ ++ PE P ++ + E + K + +P ++ + + E+ +++ E
Sbjct: 1269 FKLNLYTPPETPMEPDEQVTVE----EQKETSEGKTSPSPIRIEEEVKETG-EALLPQEE 1323
Query: 99 NQASEE------EDELGELRE--LGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAG 150
N+ E GE E L P EE+EEEEE++EEEEEEE + E G
Sbjct: 1324 NRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEE-------GGG 1376
Query: 151 QKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSE 201
G + + P + + D D E E EE + PS +E
Sbjct: 1377 NVEKDPDGAKSQEKEEPEISTEKEDSARLDDHE-----EEEEEDEEPSHNE 1422
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 78 SLKAVQRIAESHLQSISN-LNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEED 136
S +A R + + +QS + L+ ++ E G+L EL E+EEEEED+EEEEEEE+
Sbjct: 1027 STRANSRQSPAKVQSKNKYLHSPESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEE 1086
Query: 137 SQAE 140
+ +
Sbjct: 1087 EEED 1090
Score = 32.0 bits (71), Expect = 0.37
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAE 140
+EE E+ +E ++ EEEEE+DEE ED A+
Sbjct: 1390 KEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDAD 1427
Score = 28.9 bits (63), Expect = 3.2
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 43 EHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQAS 102
E EEE + EG K P+ S + + + + + L++++
Sbjct: 1356 EEEEEEEEEEEEEGEEEEGGGNVEKDPDGAK----SQEKEEPEISTEKEDSARLDDHEEE 1411
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEE--EDSQAEVLK 143
EEEDE E +ED+ E E E+EE +S EVL+
Sbjct: 1412 EEEDEEPSHNEDHDADDEDDSHMESAEVEKEELPRESFKEVLE 1454
Score = 28.1 bits (61), Expect = 5.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 98 ENQASEEEDELGELRELGYPREEDEEE-EEDDEEEEEEEDSQAEVLKVIRQ 147
E + S E+++ L + EEDEE +D + ++E+DS E +V ++
Sbjct: 1392 EPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKE 1442
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 47.8 bits (112), Expect = 7e-06
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 76 PPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEE 135
PP+ + + + Q + Q EEE EE+EEEEE++EEEEEE
Sbjct: 1106 PPNWEKYRLFRAAQQQKQQQQQQKQQEEEE-------------EEEEEEEEEEEEEEEEA 1152
Query: 136 DSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSE 189
+ + E L S+ +C E E+P PL +G + PA E
Sbjct: 1153 EEEEEELPPQYFSSETSGSCALNPEEVLEQPQPLSFGHLEGSRQGSQSVPAEQE 1206
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 47.4 bits (111), Expect = 9e-06
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQ-----AEV-LKVIRQSAGQKTTCG 156
++EDE E G ++EEEEED EEEEEEED + AEV + + ++
Sbjct: 515 DQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEE 574
Query: 157 QGLEGPWER----PPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT 204
+GLE R P PLD E GG+ + E + P ++ Q +PG+
Sbjct: 575 EGLEEDEPRFTIIPNPLDRREEAGGASSEEESGEDTGP-QDAQEYGNYQPGS 625
Score = 42.0 bits (97), Expect = 4e-04
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 29/146 (19%)
Query: 44 HSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASE 103
H S + E S R HHL S R SH + +E +SE
Sbjct: 137 HGSEDTEDSAEHR-----HHLPSHR-------------------SHSHQDEDEDEVVSSE 172
Query: 104 EEDELGELRELGYPREEDEEEEEDDEEEEEEEDS-----QAEVLKVIRQSAGQKTTCGQG 158
+ G+ E+DE EEE++EEEEEEE S QA + + + G
Sbjct: 173 HHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGHH 232
Query: 159 LEGPWERPPPLDESERDGGSEDQVED 184
GP R +E + D +D +D
Sbjct: 233 HHGPSHRHQGHEEDDDDDDDDDDDDD 258
Score = 30.8 bits (68), Expect = 0.83
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 97 NENQASEEEDELGELRELGYP------REEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAG 150
+ SEE++++ + P EED+++++DD+++++++D E + G
Sbjct: 216 HRGHGSEEDEDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQG 275
Query: 151 QKTTCGQGL-EGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQR 196
+ + +G R P R +D +D +E G + R
Sbjct: 276 HGIEEDEDVSDGHHHRDP--SHRHRSHEEDDNDDDDVSTEYGHQAHR 320
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 47.0 bits (110), Expect = 1e-05
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 101 ASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQS-------AGQKT 153
A EEE++ E R E+E+E+E++EEEEEEE+ + EV +V+ S GQ
Sbjct: 332 AYEEENKAVEKMPRELSRIEEEKEDEEEEEEEEEEEEEEEVTEVLLDSCVVSQVGVGQSE 391
Query: 154 TCGQGLEGP-----WERPPPLDESERDGGSEDQVEDPALSEPGEEPQ 195
G + WE + E + ++++ E+ A E +EPQ
Sbjct: 392 EDGTRPQSTSDQKLWEEVGEEAKKEAEEKAKEEAEEVAEEEAEKEPQ 438
Score = 30.4 bits (67), Expect = 1.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 75 TPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEE 134
T P + Q++ E + E +A EE +E+ E EE E+E +D E +EE
Sbjct: 395 TRPQSTSDQKLWEEVGEEAKKEAEEKAKEEAEEVAE--------EEAEKEPQDWAETKEE 446
Query: 135 EDSQAE 140
+++AE
Sbjct: 447 PEAEAE 452
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 29/112 (25%)
Query: 93 ISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQK 152
+++L++++ EEE+E E E EE++EEEE++EEEEEEE+ Q
Sbjct: 354 LASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQR------------ 401
Query: 153 TTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEPGT 204
GQG E+ ++ DP EP P P++ T
Sbjct: 402 ---GQG--------------EKSATPSRKILDPNTGEPAPVLSSPPPADVST 436
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 45.8 bits (107), Expect = 3e-05
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 98 ENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQ 138
E EEEDE E++E G EE+EEEEE++EEEEEEE+ +
Sbjct: 109 EETEREEEDE--EIQEEGGEEEEEEEEEEEEEEEEEEEEEE 147
Score = 44.7 bits (104), Expect = 6e-05
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 98 ENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQ 138
E + EE++E+ E E G EE+EEEEE++EEEEEEE+ Q
Sbjct: 110 ETEREEEDEEIQE--EGGEEEEEEEEEEEEEEEEEEEEEEQ 148
Score = 29.3 bits (64), Expect = 2.4
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 92 SISNLNENQASEEED-ELGELRELG-----------YPR--EEDEEEEEDD--------E 129
S N + +Q S ED EL L + YP EE+ E EE+D E
Sbjct: 67 STENRSSDQESASEDIELESLEDFEHFLMSGESLFHYPLVGEEETEREEEDEEIQEEGGE 126
Query: 130 EEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWER 165
EEEEEE+ + E + + Q QG G E+
Sbjct: 127 EEEEEEEEEEEEEEEEEEEEEQPRAGPQGSGGNHEQ 162
Score = 27.3 bits (59), Expect = 9.2
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 112 RELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGL-------EGPWE 164
R+ G+P + E D +E ED + E L+ G+ L E E
Sbjct: 58 RDGGFPNDASTENRSSD-QESASEDIELESLEDFEHF----LMSGESLFHYPLVGEEETE 112
Query: 165 RPPPLDESERDGGSEDQVEDPALSEPGEEPQ 195
R +E + +GG E++ E+ E EE +
Sbjct: 113 REEEDEEIQEEGGEEEEEEEEEEEEEEEEEE 143
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 266 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 323
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 324 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 383
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 384 PDSPALS 390
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 199 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 257
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 258 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 317
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 318 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 357
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 275 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 332
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 333 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 392
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 393 PDSPALS 399
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 208 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 266
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 267 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 326
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 327 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 366
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 243 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 300
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 301 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 360
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 361 PDSPALS 367
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 176 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 234
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 235 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 294
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 295 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 334
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 232 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 289
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 290 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 349
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 350 PDSPALS 356
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 165 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 223
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 224 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 283
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 284 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 323
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 21 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 78
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 79 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 138
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 139 PDSPALS 145
Score = 33.9 bits (76), Expect = 0.098
Identities = 26/106 (24%), Positives = 42/106 (39%)
Query: 93 ISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQK 152
+S+L + SE + E +EEEEE++EEEEE S+ + + ++
Sbjct: 7 LSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 66
Query: 153 TTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
T E + + E E E + E+ L P R S
Sbjct: 67 ETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 112
Score = 33.9 bits (76), Expect = 0.098
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDD---------EEEEEEEDSQ 138
S LQ IS+ +E + S E E EE+EEEEE++ EEEEEEE+ +
Sbjct: 8 SDLQDISD-SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 66
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 277 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 334
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED---------PALSEPGEE 193
SA + + + E P +RD G ++ E+ AL+E
Sbjct: 335 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYV 394
Query: 194 PQRPSPS 200
P P+ S
Sbjct: 395 PDSPALS 401
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 210 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 268
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 269 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 328
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 329 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 368
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 98 ENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEE-EDSQAEVLKVIRQSAGQKTTCG 156
E + EEE+E GE ELG E +EE + D +EEEEE E+S +E L+ + G G
Sbjct: 426 EEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGG 485
Query: 157 Q-GLEGPWERP--PPL------DESERDGGSEDQVEDPALSEPGEEPQRPSPSEP 202
G G E P L ++S+ D ED E+ E ++ + P
Sbjct: 486 SFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVP 540
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 94 SNLNENQASEEEDELGELRELGYPREEDEEEEEDDEE--------EEEEEDSQAEVLKVI 145
++L EEE+E E E G EE+EE EE++EE EEEE + + +V
Sbjct: 399 TSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDE 458
Query: 146 RQSAGQKTTCGQGLEGPWERPPPLDESERDG--GSEDQVEDPALS--EPGEEPQRPSPSE 201
+ ++++ +GLE ++ G G++++ + P L E GE+ S E
Sbjct: 459 EEEEDEESS-SEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEE 517
Score = 30.0 bits (66), Expect = 1.4
Identities = 9/26 (34%), Positives = 21/26 (80%)
Query: 119 EEDEEEEEDDEEEEEEEDSQAEVLKV 144
EED+EEE+D++E++++++ + + V
Sbjct: 516 EEDDEEEDDEDEDDDDDEEDGDEVPV 541
Score = 29.3 bits (64), Expect = 2.4
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 120 EDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQ 151
E+E++EE+D+E+E+++D + + +V S G+
Sbjct: 515 EEEDDEEEDDEDEDDDDDEEDGDEVPVPSFGE 546
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 45.4 bits (106), Expect = 3e-05
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 265 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 322
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED 184
SA + + + E P +RD G ++ E+
Sbjct: 323 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEE 364
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 198 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 256
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 257 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 316
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 317 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 356
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/90 (23%), Positives = 33/90 (36%)
Query: 45 SSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEE 104
S EEE + EG + + E+ QS ++E + SE+
Sbjct: 276 SGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSED 335
Query: 105 EDELGELRELGYPREEDEEEEEDDEEEEEE 134
E+ E L P + + + EE EEE
Sbjct: 336 EERENENHLLVVPESRFDRDSGESEEAEEE 365
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 45.4 bits (106), Expect = 3e-05
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 88 SHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQ 147
S +S S + + + EEE+E E E G EE EEEEE++EEEEEE S +E + Q
Sbjct: 275 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE--EASEQ 332
Query: 148 SAGQKTTCGQGLEGPWERP-----PPLDESERDGGSEDQVED 184
SA + + + E P +RD G ++ E+
Sbjct: 333 SAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEE 374
Score = 34.3 bits (77), Expect = 0.075
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Query: 50 EASPHQRASGEGHHLKSKRPNPCAYTPP-----------SLKAVQRIAESHLQSISNLNE 98
E S H R E + K K + + +PP K V+ +S+L +
Sbjct: 208 EVSAHHRTMREDYSDKVKASH-WSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 266
Query: 99 NQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQG 158
SE + E +EEEEE++EEEEE S+ + + ++ T
Sbjct: 267 ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 326
Query: 159 LEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
E + + E E E + E+ L P R S
Sbjct: 327 EEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDS 366
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/90 (23%), Positives = 33/90 (36%)
Query: 45 SSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEE 104
S EEE + EG + + E+ QS ++E + SE+
Sbjct: 286 SGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSED 345
Query: 105 EDELGELRELGYPREEDEEEEEDDEEEEEE 134
E+ E L P + + + EE EEE
Sbjct: 346 EERENENHLLVVPESRFDRDSGESEEAEEE 375
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 45.1 bits (105), Expect = 4e-05
Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 6/156 (3%)
Query: 43 EHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQAS 102
E S EE S + H L SK + E + E +
Sbjct: 336 EESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE 395
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGP 162
EEE+E+ + E R ++EEE E +EE+E+ED + +Q G + T G+ E
Sbjct: 396 EEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGTEETYGEVEE-- 453
Query: 163 WERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPS 198
PLDE++ D E +P + P+
Sbjct: 454 ----EPLDEAQDDDLDELMEMEPTFVHASSQTSGPT 485
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 43 EHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQAS 102
E S E+E P R++ + +++R S K ++ +Q S+ S
Sbjct: 1354 EVSESEDEQRPRTRSAKKAELEENQR---------SYKQKKKRRRIKVQEDSSSENKSNS 1404
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQA-----EVLKVIRQSAGQKTTCGQ 157
EEE+E E EE+EEEEE++EEE+E +DS++ + ++ I + +T
Sbjct: 1405 EEEEEEKE-------EEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQN 1457
Query: 158 GLEGPWERPPPLDESERD 175
L+ ER + E ER+
Sbjct: 1458 ALKEEEERRKRIAERERE 1475
Score = 35.4 bits (80), Expect = 0.034
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 77 PSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEED 136
P + +++ +++ + +E+ +S++E E G+ R G EE+ +EE + E D
Sbjct: 1229 PENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRT-GKQNEENPGDEEAKNQVNSESD 1287
Query: 137 SQAEVLKVIR---QSAGQKTTCGQGLEGPWERPPPLDESERDGG-----SEDQVEDPALS 188
S +E K R + K T G G ++ P + E G S + ED
Sbjct: 1288 SDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQ 1347
Query: 189 EPG--------EEPQRP 197
E G E+ QRP
Sbjct: 1348 ESGVSEEVSESEDEQRP 1364
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 43 EHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQAS 102
E S E+E P R++ + +++R S K ++ +Q S+ S
Sbjct: 1392 EVSESEDEQRPRTRSAKKAELEENQR---------SYKQKKKRRRIKVQEDSSSENKSNS 1442
Query: 103 EEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQA-----EVLKVIRQSAGQKTTCGQ 157
EEE+E E EE+EEEEE++EEE+E +DS++ + ++ I + +T
Sbjct: 1443 EEEEEEKE-------EEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQN 1495
Query: 158 GLEGPWERPPPLDESERD 175
L+ ER + E ER+
Sbjct: 1496 ALKEEEERRKRIAERERE 1513
Score = 35.4 bits (80), Expect = 0.034
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 77 PSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEED 136
P + +++ +++ + +E+ +S++E E G+ R G EE+ +EE + E D
Sbjct: 1267 PENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRT-GKQNEENPGDEEAKNQVNSESD 1325
Query: 137 SQAEVLKVIR---QSAGQKTTCGQGLEGPWERPPPLDESERDGG-----SEDQVEDPALS 188
S +E K R + K T G G ++ P + E G S + ED
Sbjct: 1326 SDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQ 1385
Query: 189 EPG--------EEPQRP 197
E G E+ QRP
Sbjct: 1386 ESGVSEEVSESEDEQRP 1402
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 44.7 bits (104), Expect = 6e-05
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
Query: 52 SPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGE- 110
SP RA+ + ++ +KR + P+ K+ + +S +S + E++ E+EDE E
Sbjct: 601 SPQDRAAYK-EYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 659
Query: 111 --------------------LRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAG 150
E G EED+E+E+DDE+++E+ED+++E S+G
Sbjct: 660 DENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Query: 151 QKT 153
+
Sbjct: 720 DSS 722
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 44.7 bits (104), Expect = 6e-05
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
Query: 52 SPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGE- 110
SP RA+ + ++ +KR + P+ K+ + +S +S + E++ E+EDE E
Sbjct: 601 SPQDRAAYK-EYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 659
Query: 111 --------------------LRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAG 150
E G EED+E+E+DDE+++E+ED+++E S+G
Sbjct: 660 DENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Query: 151 QKT 153
+
Sbjct: 720 DSS 722
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 44.7 bits (104), Expect = 6e-05
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
Query: 52 SPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGE- 110
SP RA+ + ++ +KR + P+ K+ + +S +S + E++ E+EDE E
Sbjct: 638 SPQDRAAYK-EYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 696
Query: 111 --------------------LRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAG 150
E G EED+E+E+DDE+++E+ED+++E S+G
Sbjct: 697 DENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 756
Query: 151 QKT 153
+
Sbjct: 757 DSS 759
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 44.3 bits (103), Expect = 7e-05
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 95 NLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTT 154
+++E S+ + E+ L E EE+EEEEE++EEEEEEE+ + E + QS ++
Sbjct: 278 SVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSS 337
Query: 155 CGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEP 190
+ + W + P + R + E P EP
Sbjct: 338 GRRKAKKKWRKDSPWVKPSR---KRRKREPPRAKEP 370
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 83 QRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVL 142
+R+ + L E + EEE+E E EE+EEEEE++EEEEE+E+S +
Sbjct: 281 ERVDSDSKSEVEALTEQLSEEEEEEEEE--------EEEEEEEEEEEEEEEDEESGNQSD 332
Query: 143 KVIRQSAGQKTTCGQGLEGPWERP 166
+ S +K + PW +P
Sbjct: 333 R-SGSSGRRKAKKKWRKDSPWVKP 355
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 44.3 bits (103), Expect = 7e-05
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 95 NLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTT 154
+++E S+ + E+ L E EE+EEEEE++EEEEEEE+ + E + QS ++
Sbjct: 278 SVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSS 337
Query: 155 CGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEP 190
+ + W + P + R + E P EP
Sbjct: 338 GRRKAKKKWRKDSPWVKPSR---KRRKREPPRAKEP 370
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 83 QRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVL 142
+R+ + L E + EEE+E E EE+EEEEE++EEEEE+E+S +
Sbjct: 281 ERVDSDSKSEVEALTEQLSEEEEEEEEE--------EEEEEEEEEEEEEEEDEESGNQSD 332
Query: 143 KVIRQSAGQKTTCGQGLEGPWERP 166
+ S +K + PW +P
Sbjct: 333 R-SGSSGRRKAKKKWRKDSPWVKP 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.303 0.126 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,432,036
Number of Sequences: 37866
Number of extensions: 715023
Number of successful extensions: 24155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 533
Number of HSP's that attempted gapping in prelim test: 6180
Number of HSP's gapped (non-prelim): 6938
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.