Guide to the Human Genome
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Name: PPP1R1C Sequence: fasta or formatted (109aa) NCBI GI: 122937386
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 1C

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4          7           2
 C cysteine            0.0          0           0
 D aspartate           2.8          3           2
 E glutamate          12.8         14           4
 F phenylalanine       2.8          3           1
 G glycine             4.6          5           1
 H histidine           2.8          3           1
 I isoleucine          5.5          6           1
 K lysine              8.3          9           2
 L leucine             3.7          4           1
 M methionine          0.9          1           1
 N asparagine          6.4          7           1
 P proline            11.9         13           2
 Q glutamine           9.2         10           1
 R arginine            6.4          7           2
 S serine              5.5          6           1
 T threonine           4.6          5           1
 V valine              4.6          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subun... 
PPP1R1A               0.312   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R1B               0.261   protein phosphatase 1, regulatory (inhibitor) subuni...
LOC729159             0.065   PREDICTED: UPF0607 protein ENSP00000381418-like [Ho...
LOC729159             0.065   PREDICTED: UPF0607 protein ENSP00000381418-like [Ho...
LOC729159             0.065   PREDICTED: UPF0607 protein ENSP00000381418-like [Ho...
PPP1R1B               0.050   protein phosphatase 1, regulatory (inhibitor) subuni...
SLC24A1               0.050   solute carrier family 24 (sodium/potassium/calcium ex...
LOC100129307          0.050   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
LOC100129307          0.050   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
LOC100129307          0.050   PREDICTED: UPF0607 protein ENSP00000383144-like [Ho...
IFIT1                 0.045   interferon-induced protein with tetratricopeptide r...
LOC100128610          0.040   PREDICTED: similar to Putative UPF0607 protein ENSP...
LOC100131107          0.040   PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...
LOC100131107          0.040   PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...
LOC100131107          0.040   PREDICTED: UPF0607 protein ENSP00000383783-like [Ho...
LOC100132229          0.035   PREDICTED: UPF0607 protein ENSP00000382826-like [Ho...
NCL                   0.030   nucleolin 
NAP5                  0.030   Nck-associated protein 5 isoform 1 
LOC100132229          0.030   PREDICTED: hypothetical protein 
LOC100132229          0.030   PREDICTED: UPF0607 protein ENSP00000382826-like [Ho...
FAM160A1              0.030   hypothetical protein LOC729830 
TTN                   0.030   titin isoform N2-A 
LOC100128610          0.030   PREDICTED: similar to Putative UPF0607 protein ENSP...
CREB3L2               0.025   cAMP responsive element binding protein 3-like 2 [Ho...
MAPT                  0.025   microtubule-associated protein tau isoform 6 
LOC100128610          0.025   PREDICTED: similar to Putative UPF0607 protein ENSP...
ZFP91                 0.020   zinc finger protein 91 
LOC100128362          0.015   PREDICTED: similar to protein phosphatase 2, cataly...
KIAA1529              0.015   hypothetical protein LOC57653 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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