Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NOC4L Sequence: fasta or formatted (516aa) NCBI GI: 13129068
Description:

nucleolar complex associated 4 homolog

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         51           2
 C cysteine            1.4          7           2
 D aspartate           3.7         19           2
 E glutamate           7.8         40           2
 F phenylalanine       4.8         25           2
 G glycine             4.8         25           2
 H histidine           4.1         21           1
 I isoleucine          2.3         12           1
 K lysine              4.3         22           3
 L leucine            16.3         84           3
 M methionine          1.7          9           1
 N asparagine          1.7          9           2
 P proline             6.6         34           2
 Q glutamine           3.9         20           1
 R arginine            7.0         36           2
 S serine              6.2         32           3
 T threonine           2.7         14           1
 V valine              6.4         33           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar complex associated 4 homolog 
NOC3L                 0.025   nucleolar complex associated 3 homolog 
CEBPZ                 0.015   CCAAT/enhancer binding protein zeta 
ADAMTSL4              0.007   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.007   thrombospondin repeat containing 1 isoform 2 
KCTD4                 0.006   potassium channel tetramerisation domain containing...
MMS19                 0.006   MMS19 nucleotide excision repair homolog 
COPB1                 0.005   coatomer protein complex, subunit beta 1 
COPB1                 0.005   coatomer protein complex, subunit beta 1 
COPB1                 0.005   coatomer protein complex, subunit beta 1 
SPTBN4                0.005   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
HDAC11                0.004   histone deacetylase 11 isoform 1 
MUPCDH                0.004   mucin and cadherin-like isoform 3 
MUPCDH                0.004   mucin and cadherin-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press