Guide to the Human Genome
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Name: ZNF670 Sequence: fasta or formatted (389aa) NCBI GI: 15082252
Description:

zinc finger protein 670

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         14           1
 C cysteine            6.4         25           1
 D aspartate           2.8         11           2
 E glutamate           9.3         36           2
 F phenylalanine       5.1         20           1
 G glycine             6.4         25           1
 H histidine           5.7         22           1
 I isoleucine          2.3          9           1
 K lysine             10.3         40           2
 L leucine             5.1         20           2
 M methionine          1.3          5           1
 N asparagine          3.3         13           1
 P proline             3.9         15           1
 Q glutamine           3.1         12           1
 R arginine            5.4         21           1
 S serine             10.5         41           3
 T threonine           5.7         22           1
 V valine              4.6         18           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 670 
ZNF709                0.574   zinc finger protein 709 isoform a 
ZNF627                0.558   zinc finger protein 627 
ZNF669                0.552   zinc finger protein 669 isoform 2 
ZNF669                0.549   zinc finger protein 669 isoform 1 
ZNF14                 0.546   zinc finger protein 14 
ZNF791                0.544   zinc finger protein 791 
ZNF564                0.540   zinc finger protein 564 
LOC100292533          0.536   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.533   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.533   PREDICTED: hypothetical protein XP_002343682 
ZNF433                0.531   zinc finger protein 433 
ZNF136                0.527   zinc finger protein 136 
ZNF490                0.525   zinc finger protein 490 
ZNF20                 0.519   zinc finger protein 20 
LOC729747             0.515   similar to zinc finger protein 709 
LOC100290283          0.510   PREDICTED: hypothetical protein XP_002347961 
ZNF709                0.509   zinc finger protein 709 isoform b 
ZNF101                0.498   zinc finger protein 101 
ZNF443                0.493   zinc finger protein 443 
ZNF700                0.486   zinc finger protein 700 
ZNF44                 0.480   zinc finger protein 44 
ZNF442                0.478   zinc finger protein 442 
ZNF799                0.477   zinc finger protein 799 
ZNF563                0.470   zinc finger protein 563 
ZNF439                0.469   zinc finger protein 439 
ZNF823                0.469   ZFP-36 for a zinc finger protein 
ZNF440                0.467   zinc finger protein 440 
ZNF844                0.459   zinc finger protein 844 
ZNF555                0.459   zinc finger protein 555 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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