Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21614538
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21614538 HtrA serine peptidase 2 isoform 2 [Homo sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21614538 HtrA serine peptidase 2 isoform 2 [Homo sapiens] 711 0.0
gi|7019477 HtrA serine peptidase 2 isoform 1 preproprotein [Homo... 589 e-168
gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens] 115 5e-26
gi|22129776 HtrA serine peptidase 3 [Homo sapiens] 114 2e-25
gi|24308541 HtrA serine peptidase 4 precursor [Homo sapiens] 93 3e-19
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 37 0.021
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens] 35 0.10
gi|57529222 basic helix-loop-helix domain containing, class B, 4... 34 0.23
gi|222537750 ankyrin repeat domain 30B [Homo sapiens] 33 0.40
gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens] 33 0.52
gi|115495445 ankyrin repeat domain 30A [Homo sapiens] 32 0.68
gi|18375507 apurinic/apyrimidinic endonuclease 2 [Homo sapiens] 32 0.68
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 32 0.88
gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens] 32 0.88
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 32 0.88
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 32 1.2
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 31 1.5
gi|154800453 tastin isoform 1 [Homo sapiens] 31 1.5
gi|169211260 PREDICTED: similar to hCG2042422 [Homo sapiens] 31 2.0
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens] 31 2.0
gi|169211653 PREDICTED: hypothetical protein [Homo sapiens] 31 2.0
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens] 31 2.0
gi|169210872 PREDICTED: similar to hCG2042422 [Homo sapiens] 31 2.0
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens] 31 2.0
gi|223972612 Crm, cramped-like [Homo sapiens] 30 2.6
gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens] 30 2.6
gi|48526509 translocase of inner mitochondrial membrane 50 homol... 30 2.6
gi|164698502 septin 9 isoform d [Homo sapiens] 30 4.4
>gi|21614538 HtrA serine peptidase 2 isoform 2 [Homo sapiens]
Length = 361
Score = 711 bits (1834), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR 60
MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR
Sbjct: 1 MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR 60
Query: 61 LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL 120
LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL
Sbjct: 61 LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL 120
Query: 121 LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS 180
LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS
Sbjct: 121 LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS 180
Query: 181 NGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKFGN 240
NGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKFGN
Sbjct: 181 NGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKFGN 240
Query: 241 SGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVM 300
SGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVM
Sbjct: 241 SGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVM 300
Query: 301 MLTLSPRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVT 360
MLTLSPRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVT
Sbjct: 301 MLTLSPRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVT 360
Query: 361 E 361
E
Sbjct: 361 E 361
>gi|7019477 HtrA serine peptidase 2 isoform 1 preproprotein [Homo
sapiens]
Length = 458
Score = 589 bits (1518), Expect = e-168
Identities = 332/458 (72%), Positives = 339/458 (74%), Gaps = 97/458 (21%)
Query: 1 MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR 60
MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR
Sbjct: 1 MAAPRAGRGAGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWAR 60
Query: 61 LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL 120
LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL
Sbjct: 61 LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLL 120
Query: 121 LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS 180
LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS
Sbjct: 121 LWGGGRGPPAVLAAVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPIS 180
Query: 181 NGSGFVVAADGLI--------------------------VTNAHVVADRRRVRVR----- 209
NGSGFVVAADGLI VT VAD +R++
Sbjct: 181 NGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKEPL 240
Query: 210 -------------------------LLSGDTYEAVVTAVDPVADIATLR-----IQTK-- 237
L + T V +A P D+ + IQT
Sbjct: 241 PTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAA 300
Query: 238 --FGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRR 295
FGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRR
Sbjct: 301 IDFGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRR 360
Query: 296 YIGVMMLTLSP--------------------------------RAGLRPGDVILAIGEQM 323
YIGVMMLTLSP RAGLRPGDVILAIGEQM
Sbjct: 361 YIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQM 420
Query: 324 VQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE 361
VQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE
Sbjct: 421 VQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE 458
>gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens]
Length = 480
Score = 115 bits (289), Expect = 5e-26
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 140 PASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHV 199
P S R +YNFIADVVEK APAVV+IE+ + PF REVP+++GSGF+V+ DGLIVTNAHV
Sbjct: 162 PNSLRHKYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHV 221
Query: 200 VADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRI 234
V ++ RV+V L +G TYEA + VD ADIA ++I
Sbjct: 222 VTNKHRVKVELKNGATYEAKIKDVDEKADIALIKI 256
Score = 106 bits (264), Expect = 4e-23
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 33/153 (21%)
Query: 238 FGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYI 297
+GNSGGPLVNLDGEVIG+NT+KVTAGISFAIPSD++++FL + + G + ++++YI
Sbjct: 325 YGNSGGPLVNLDGEVIGINTLKVTAGISFAIPSDKIKKFLTESHDR-QAKGKAITKKKYI 383
Query: 298 GVMMLTL--------------------------------SPRAGLRPGDVILAIGEQMVQ 325
G+ M++L + GL+ DVI++I Q V
Sbjct: 384 GIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVV 443
Query: 326 NAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPE 358
+A DV + ++ +S L + +RRG E + + V PE
Sbjct: 444 SANDVSDVIKRESTLNMVVRRGNEDIMITVIPE 476
>gi|22129776 HtrA serine peptidase 3 [Homo sapiens]
Length = 453
Score = 114 bits (284), Expect = 2e-25
Identities = 55/103 (53%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Query: 141 ASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVV 200
+SPR ++NFIADVVEK APAVV+IE+ RHP GR VP+S+GSGF+++ GLI+TNAHVV
Sbjct: 134 SSPRYKFNFIADVVEKIAPAVVHIELFLRHPLFGRNVPLSSGSGFIMSEAGLIITNAHVV 193
Query: 201 AD------RRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTK 237
+ R++++V+L +GD+YEA + +D +DIAT++I K
Sbjct: 194 SSNSAAPGRQQLKVQLQNGDSYEATIKDIDKKSDIATIKIHPK 236
Score = 107 bits (268), Expect = 1e-23
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 36/154 (23%)
Query: 238 FGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYI 297
+GNSGGPLVNLDGEVIG+NT+KVTAGISFAIPSDR+ FL + K I ++R+I
Sbjct: 302 YGNSGGPLVNLDGEVIGINTLKVTAGISFAIPSDRITRFLTEFQDKQ----IKDWKKRFI 357
Query: 298 GVMMLTLSP--------------------------------RAGLRPGDVILAIGEQMVQ 325
G+ M T++P R G++ GD+I+ + + +
Sbjct: 358 GIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLV 417
Query: 326 NAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEV 359
++ ++ EAV T+S L +++RRG + L + PEV
Sbjct: 418 DSSELQEAVLTESPLLLEVRRGNDDLLFSIAPEV 451
>gi|24308541 HtrA serine peptidase 4 precursor [Homo sapiens]
Length = 476
Score = 93.2 bits (230), Expect = 3e-19
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 34/167 (20%)
Query: 224 DPVADIATLRIQTKFGNSGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKK 283
D D + +GNSGGPLVNLDG+VIGVN+++VT GISFAIPSDR+R+FL +
Sbjct: 309 DSDMDYVQIDATINYGNSGGPLVNLDGDVIGVNSLRVTDGISFAIPSDRVRQFLAE-YHE 367
Query: 284 NSSSGISGSQRRYIGVMMLTL--------------------------------SPRAGLR 311
+ G + S ++Y+G+ ML+L + +GLR
Sbjct: 368 HQMKGKAFSNKKYLGLQMLSLTVPLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLR 427
Query: 312 PGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPE 358
DVI+ I + + DV +A+ + S L++ + RG++ L L V PE
Sbjct: 428 DHDVIVNINGKPITTTTDVVKALDSDS-LSMAVLRGKDNLLLTVIPE 473
Score = 90.9 bits (224), Expect = 2e-18
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 144 RSQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVVADR 203
R YNFIA VVEK AP+VV++++ R R VP+ +GSGF+V+ DGLI+TNAHVV ++
Sbjct: 164 RRNYNFIAAVVEKVAPSVVHVQLWGRLLHGSRLVPVYSGSGFIVSEDGLIITNAHVVRNQ 223
Query: 204 RRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKFGNSGGPLVNLD-GEVIGVNTMKVTA 262
+ + V L +G YEAVV +D D+A ++I++ N+ P++ L + V
Sbjct: 224 QWIEVVLQNGARYEAVVKDIDLKLDLAVIKIES---NAELPVLMLGRSSDLRAGEFVVAL 280
Query: 263 GISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGV 299
G F++ + + ++ G+ S Y+ +
Sbjct: 281 GSPFSLQNTATAGIVSTKQRGGKELGMKDSDMDYVQI 317
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 37.4 bits (85), Expect = 0.021
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 55 PSLWARLSVGVTEPRACLTSGTPGPRAQL-TAVTPDTRTREASENSGTRSRAWLAVALGA 113
P W RL+VG P T PR T+ PD R + GTR+R A G
Sbjct: 4 PPTWLRLAVG-PGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGE 62
Query: 114 GGAVLLLLWGGGRGPPAVLAAVPSPPPASPR 144
GG G PPA A P P +PR
Sbjct: 63 GGL-------SGPAPPARRRAYPLQPRPTPR 86
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 37.4 bits (85), Expect = 0.021
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 55 PSLWARLSVGVTEPRACLTSGTPGPRAQL-TAVTPDTRTREASENSGTRSRAWLAVALGA 113
P W RL+VG P T PR T+ PD R + GTR+R A G
Sbjct: 4 PPTWLRLAVG-PGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGE 62
Query: 114 GGAVLLLLWGGGRGPPAVLAAVPSPPPASPR 144
GG G PPA A P P +PR
Sbjct: 63 GGL-------SGPAPPARRRAYPLQPRPTPR 86
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 35.0 bits (79), Expect = 0.10
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 77 PGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAG----GAVLLLLWGG---GRGPP 129
PGP A + TR+R W A AG GA LL L G GR P
Sbjct: 31 PGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPL 90
Query: 130 AVLAAVPSPPPASPRSQ 146
A P P P +PR++
Sbjct: 91 TFREASPGPAPGAPRAR 107
>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
Length = 951
Score = 35.0 bits (79), Expect = 0.10
Identities = 42/134 (31%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 26 GRRPRLTPDLRALLTSGT----SDPRARVTYGTPSLWARLSV-GVTEPRACLTSGTPGPR 80
G+ P TP T S P RVT PS A S G+ +P+ +PGP
Sbjct: 198 GKGPASTPTYSPAPTQPAPRIASAPEPRVTLEGPSATAPASSPGLAKPQMPPGPCSPGPL 257
Query: 81 AQLTAVTPDTRTR--EASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSP 138
AQL + D + A + T + A + AVL L RG P L+ +P P
Sbjct: 258 AQLQSRQRDYKLAALHAKQQGDTTAAARHFRVAKSFDAVLEAL---SRGEPVDLSCLPPP 314
Query: 139 P------PASPRSQ 146
P P SP SQ
Sbjct: 315 PDQLPPDPPSPPSQ 328
>gi|57529222 basic helix-loop-helix domain containing, class B, 4
[Homo sapiens]
Length = 225
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 37 ALLTSGTSDPRARVTYGTPSLWARLSVGVT-EPRACLTSGTPGPRAQLTAVTPDTRTREA 95
A L S + D +++G + A L+ G EP A GTPGP L A +A
Sbjct: 2 AELKSLSGDAYLALSHGYAAAAAGLAYGAAREPEAARGYGTPGPGGDLPAAPAPRAPAQA 61
Query: 96 SENSGTRS 103
+E+SG +S
Sbjct: 62 AESSGEQS 69
>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
Length = 1392
Score = 33.1 bits (74), Expect = 0.40
Identities = 24/68 (35%), Positives = 26/68 (38%)
Query: 32 TPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPGPRAQLTAVTPDTR 91
TPD A L T D + TP ARL G + CL T G Q T TP
Sbjct: 280 TPDEAAPLAERTPDTAESLLEKTPDEAARLVEGTSAKIQCLGKATSGKFEQSTEETPRKI 339
Query: 92 TREASENS 99
R E S
Sbjct: 340 LRPTKETS 347
>gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens]
Length = 422
Score = 32.7 bits (73), Expect = 0.52
Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 33 PDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPGPRAQLTAVTPDTRT 92
P L LL GT+ G + A SV + P + G+ AQ AV + +
Sbjct: 31 PLLPLLLLLGTAALAPGAAAGNEAAPAGASVCYSSPPSV---GSVQELAQRAAVVIEGKV 87
Query: 93 REASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSPPPASP 143
G R A A G GA WGG R PPA PP P
Sbjct: 88 HPQRRQQGALDRK-AAAAAGEAGA-----WGGDREPPAAGPRALGPPAEEP 132
>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
Length = 1341
Score = 32.3 bits (72), Expect = 0.68
Identities = 23/68 (33%), Positives = 26/68 (38%)
Query: 32 TPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPGPRAQLTAVTPDTR 91
TPD A L T D + TP A L G ++ CL T G Q TP
Sbjct: 246 TPDEAAPLVERTPDTAESLVEKTPDEAASLVEGTSDKIQCLEKATSGKFEQSAEETPREI 305
Query: 92 TREASENS 99
T A E S
Sbjct: 306 TSPAKETS 313
>gi|18375507 apurinic/apyrimidinic endonuclease 2 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.68
Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 20/96 (20%)
Query: 70 ACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPP 129
A +T TP +A V +T EA + R+ W +V G L GG P
Sbjct: 420 ALMTPKTPEEKAVAKVVKGQAKTSEAKDEKELRTSFWKSVLAGPLRTPLC----GGHREP 475
Query: 130 AVLAAVPSP----------------PPASPRSQYNF 149
V+ V P PP P S+ NF
Sbjct: 476 CVMRTVKKPGPNLGRRFYMCARPRGPPTDPSSRCNF 511
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 32.0 bits (71), Expect = 0.88
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 74 SGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLA 133
SG P A+ T+ PD R + GTR+R A G GG G PPA
Sbjct: 3 SGRPRGTAR-TSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGL-------SGPAPPARRR 54
Query: 134 AVPSPPPASPR 144
A P P +PR
Sbjct: 55 AYPLQPRPTPR 65
>gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]
Length = 812
Score = 32.0 bits (71), Expect = 0.88
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 10 AGWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPR 69
A W + W+ + RRP + L +SG P A V GTP A L G T P+
Sbjct: 629 APWVFQPWKL---VSCPRRPAV---LTQTGSSGLLGPSAAVHAGTPPQ-AALFQG-TPPQ 680
Query: 70 ACLTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPP 129
A L GTP P+A L P + GT +A L A+L +G P
Sbjct: 681 AALFQGTP-PQAALVQGIPPQAAVLCALLQGTPPQAALLQGTPPQAALL-------QGTP 732
Query: 130 AVLAAVPSPPP 140
A + PP
Sbjct: 733 PQAALLQGTPP 743
Score = 29.6 bits (65), Expect = 4.4
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 32 TPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPGPRAQLTAVTP 88
TP ALL + P+A + GTP A L T P+A L GTP P+A L TP
Sbjct: 711 TPPQAALLQG--TPPQAALLQGTPPQAALLQG--TPPQAALLQGTP-PQAALLQGTP 762
>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
sapiens]
Length = 410
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 10/40 (25%)
Query: 110 ALGAGGAVLLLLWGGGRGPPAVLA----AVPSPPPASPRS 145
ALGAGG W G RGP V+ VP PPP P S
Sbjct: 81 ALGAGG------WAGWRGPREVVGREPPPVPPPPPLPPSS 114
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 78 GPRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPS 137
G A L A TP+ R + +G R ALGA A + G RG P+V P
Sbjct: 367 GAAASLWAKTPNQGRRPPTATAGLRGDT----ALGAPSAPEAF-YAGSRGGPSV----PD 417
Query: 138 PPPASPRS 145
P PASP S
Sbjct: 418 PGPASPYS 425
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 31.2 bits (69), Expect = 1.5
Identities = 46/150 (30%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 4 PRAGRGA--GWSLRAWRALGGIRWGRRPRLTPDLRALLTSGTS-DPRARVTYGTPSLWAR 60
P G GA G LR RA R PR P G + DP + SL
Sbjct: 113 PYEGPGAPGGQQLRKSRA-------RLPRTRPGREDAAVRGRNRDPAEPGSLRPTSLGFP 165
Query: 61 LSVGVTEPRACLTSGTPGPRAQLTAVTPDTRTREASE-NSGTRSRAWLAV-ALGAGGAVL 118
G + + PG R + TP R+ + SG RA A LGAG +V
Sbjct: 166 ARAGQGQ----VQGAAPGRRLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVR 221
Query: 119 LLLWGGGRGPPAVLAAVPSPPPASPRSQYN 148
G GPPA L P PP P +N
Sbjct: 222 -----NGPGPPARLPPAPPGPPLRPARPHN 246
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 31.2 bits (69), Expect = 1.5
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 24 RWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPGPRAQL 83
RW ++P L R L+ S P+AR T ++ VG+++PR L P PR Q
Sbjct: 49 RWVQKPPLNIQ-RPLVDSAGPRPKARHQAET----SQRLVGISQPRNPLEELRPSPRGQN 103
Query: 84 TAVTPDTRTREASENSGTRSRAWLAVALGAGG 115
P +T A LA L G
Sbjct: 104 VGPGPPAQTEAPGTIEFVADPAALATILSGEG 135
>gi|169211260 PREDICTED: similar to hCG2042422 [Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 25 WGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPG 78
WG P+ +P R L P R G P RL G +P A L G G
Sbjct: 34 WGPDPQESPGSRGLARQSRDSPPPRWPEGAPRAGQRLRRGRVDPAALLGKGHLG 87
>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 30.8 bits (68), Expect = 2.0
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 83 LTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSPPPA 141
L A+ P ++ R S G R V GA G L W G P L A SPPPA
Sbjct: 88 LIALFPSSQNRHRSAGRGLAGRLQ-QVRPGAAGPRGRLPWVTGPRPAGSLPAAQSPPPA 145
>gi|169211653 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 25 WGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPG 78
WG P+ +P R L P R G P RL G +P A L G G
Sbjct: 34 WGPDPQESPGSRGLARQSRDSPPPRWPEGAPRAGQRLRRGRVDPAALLGKGHLG 87
>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 30.8 bits (68), Expect = 2.0
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 83 LTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSPPPA 141
L A+ P ++ R S G R V GA G L W G P L A SPPPA
Sbjct: 88 LIALFPSSQNRHRSAGRGLAGRLQ-QVRPGAAGPRGRLPWVTGPRPAGSLPAAQSPPPA 145
>gi|169210872 PREDICTED: similar to hCG2042422 [Homo sapiens]
Length = 242
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 25 WGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTPG 78
WG P+ +P R L P R G P RL G +P A L G G
Sbjct: 34 WGPDPQESPGSRGLARQSRDSPPPRWPEGAPRAGQRLRRGRVDPAALLGKGHLG 87
>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 30.8 bits (68), Expect = 2.0
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 83 LTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSPPPA 141
L A+ P ++ R S G R V GA G L W G P L A SPPPA
Sbjct: 88 LIALFPSSQNRHRSAGRGLAGRLQ-QVRPGAAGPRGRLPWVTGPRPAGSLPAAQSPPPA 145
>gi|223972612 Crm, cramped-like [Homo sapiens]
Length = 1269
Score = 30.4 bits (67), Expect = 2.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 124 GGRGPPAVLAA--VPSPPPASPRSQYNFIADVV 154
G GPPA A PSPP SP+ Q++F+ V
Sbjct: 55 GADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSV 87
>gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]
Length = 407
Score = 30.4 bits (67), Expect = 2.6
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 9/39 (23%)
Query: 114 GGAVLLLL---------WGGGRGPPAVLAAVPSPPPASP 143
G A LLLL WG PP A P PPP SP
Sbjct: 10 GAACLLLLAAGWLGPEAWGSPTPPPTPAAPPPPPPPGSP 48
>gi|48526509 translocase of inner mitochondrial membrane 50 homolog
[Homo sapiens]
Length = 456
Score = 30.4 bits (67), Expect = 2.6
Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 20/154 (12%)
Query: 20 LGGIRWGRRPRLTPDLRALLTSGTSDPRARVTYGTPSLWARLSVGVTEPRACLTSGTP-G 78
+GG W +R A + S R+ + G+ L RL+ T PR G
Sbjct: 94 VGGAAWRQRKM------AASAAVFSRLRSGLRLGSRGLCTRLA---TPPRRAPDQAAEIG 144
Query: 79 PRAQLTAVTPDTRTREASENSGTRSRAWLAVALGAGGAVLLLLWGGGRGPPAVLAAVPSP 138
R A P + + + WLA LGAGG V ++ G A +P
Sbjct: 145 SRGSTKAQGPQQQPGSEGPSYAKKVALWLAGLLGAGGTVSVVYIFGNNPVDENGAKIPDE 204
Query: 139 PPASP------RSQYNFIAD----VVEKTAPAVV 162
P R Y + D ++E T+P ++
Sbjct: 205 FDNDPILVQQLRRTYKYFKDYRQMIIEPTSPCLL 238
>gi|164698502 septin 9 isoform d [Homo sapiens]
Length = 474
Score = 29.6 bits (65), Expect = 4.4
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 56 SLWARLSVGVTEPRAC----LTSGTPGPRAQLTAVTPDTRTREASENSGTRSRAWLAVAL 111
S W L V V P+ C L SG P QL A TR++ E +G L
Sbjct: 4 SFWEGLQVAVGLPQGCWPQGLDSGEPAEGGQLEAAPVCIVTRQSKETAGP--------TL 55
Query: 112 GAGG 115
G GG
Sbjct: 56 GRGG 59
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,627,854
Number of Sequences: 37866
Number of extensions: 708219
Number of successful extensions: 3509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 3412
Number of HSP's gapped (non-prelim): 144
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.