Guide to the Human Genome
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Name: HTRA2 Sequence: fasta or formatted (361aa) NCBI GI: 21614538
Description:

HtrA serine peptidase 2 isoform 2

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [458aa] HtrA serine peptidase 2 isoform 1 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         40           2
 C cysteine            0.3          1           1
 D aspartate           3.9         14           1
 E glutamate           4.4         16           1
 F phenylalanine       1.7          6           1
 G glycine            10.5         38           3
 H histidine           0.8          3           1
 I isoleucine          4.4         16           1
 K lysine              1.4          5           2
 L leucine             9.4         34           4
 M methionine          1.4          5           2
 N asparagine          2.5          9           1
 P proline             6.9         25           3
 Q glutamine           2.5          9           1
 R arginine           10.8         39           3
 S serine              6.9         25           3
 T threonine           7.5         27           1
 V valine             10.0         36           2
 W tryptophan          1.7          6           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HtrA serine peptidase 2 isoform 2 
HTRA2                 0.822   HtrA serine peptidase 2 isoform 1 preproprotein [Homo...
HTRA1                 0.131   HtrA serine peptidase 1 precursor 
HTRA3                 0.130   HtrA serine peptidase 3 
HTRA4                 0.099   HtrA serine peptidase 4 precursor 
LOC100289054          0.017   PREDICTED: hypothetical protein 
LOC100289054          0.017   PREDICTED: hypothetical protein XP_002343716 
LOC643355             0.015   PREDICTED: hypothetical protein 
CC2D1A                0.015   coiled-coil and C2 domain containing 1A 
BHLHE23               0.013   basic helix-loop-helix domain containing, class B, 4...
ANKRD30B              0.012   ankyrin repeat domain 30B 
NRG1                  0.012   neuregulin 1 isoform GGF2 
ANKRD30A              0.010   ankyrin repeat domain 30A 
APEX2                 0.010   apurinic/apyrimidinic endonuclease 2 
LOC100293176          0.010   PREDICTED: hypothetical protein 
LOC100294067          0.010   PREDICTED: similar to rCG47812 
MARCH4                0.010   membrane-associated ring finger (C3HC4) 4 
MEX3D                 0.010   ring finger and KH domain containing 1 
LOC100292184          0.009   PREDICTED: hypothetical protein 
TROAP                 0.009   tastin isoform 1 
LOC100130387          0.009   PREDICTED: similar to hCG2042422 
LOC100129036          0.009   PREDICTED: hypothetical protein 
LOC100130387          0.009   PREDICTED: hypothetical protein 
LOC100129036          0.009   PREDICTED: hypothetical protein 
LOC100130387          0.009   PREDICTED: similar to hCG2042422 
LOC100129036          0.009   PREDICTED: hypothetical protein 
CRAMP1L               0.007   Crm, cramped-like 
INHBB                 0.007   inhibin beta B subunit preproprotein 
TIMM50                0.007   translocase of inner mitochondrial membrane 50 homol...
SEPT9                 0.007   septin 9 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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