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Search of human proteins with 215490134
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo
sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo sapi... 380 e-106
gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens] 368 e-102
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 39 0.002
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 39 0.002
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 39 0.003
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 39 0.003
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 37 0.012
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 37 0.012
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 36 0.016
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 36 0.016
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 36 0.016
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 35 0.028
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 35 0.028
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 35 0.028
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 35 0.028
gi|195963410 MEF2 activating motif and SAP domain containing tra... 35 0.028
gi|212286156 zinc finger and BTB domain containing 42 [Homo sapi... 35 0.028
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 35 0.028
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 35 0.047
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.047
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.047
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 35 0.047
gi|110624768 hypothetical protein LOC283777 [Homo sapiens] 35 0.047
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 34 0.061
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.061
gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 34 0.061
gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens] 34 0.061
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens] 34 0.061
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi... 34 0.061
gi|116805330 small conductance calcium-activated potassium chann... 34 0.080
>gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo
sapiens]
Length = 183
Score = 380 bits (975), Expect = e-106
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD 60
MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD
Sbjct: 1 MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD 60
Query: 61 EDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRH 120
EDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRH
Sbjct: 61 EDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRH 120
Query: 121 RRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLELNTWMKVERLFVEKFHQSFS 180
RRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLELNTWMKVERLFVEKFHQSFS
Sbjct: 121 RRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLELNTWMKVERLFVEKFHQSFS 180
Query: 181 LDN 183
LDN
Sbjct: 181 LDN 183
>gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]
Length = 202
Score = 368 bits (945), Expect = e-102
Identities = 183/202 (90%), Positives = 183/202 (90%), Gaps = 19/202 (9%)
Query: 1 MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD 60
MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD
Sbjct: 1 MVRIWTTIMIVLILLLRIGPNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPD 60
Query: 61 EDK-------------------RPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAE 101
EDK RPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAE
Sbjct: 61 EDKVWRPAWEQGPKGEPDPRGLRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAE 120
Query: 102 TAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLEL 161
TAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLEL
Sbjct: 121 TAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLEL 180
Query: 162 NTWMKVERLFVEKFHQSFSLDN 183
NTWMKVERLFVEKFHQSFSLDN
Sbjct: 181 NTWMKVERLFVEKFHQSFSLDN 202
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 51 PGFCTWS----SPDEDKRPRKPVPGTGNRDSGTR------RRLQDATEQDPRP------- 93
P CT+S SP RP PVPG+ R S R ++ E PRP
Sbjct: 286 PRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPH 345
Query: 94 ------GNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEP 140
D S+ ++ P G R+ D RR P+R P++ P
Sbjct: 346 PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRP 398
Score = 28.5 bits (62), Expect = 3.4
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 29/138 (21%)
Query: 41 PSLFPLGLWAPGFCTWSSPDEDKRPRKPVPG-------TGNRDS----------GTRRRL 83
P + P+ L + T P+ RPR +P +G+ DS GTR
Sbjct: 318 PEMTPVSLRS----TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDD 373
Query: 84 QDATEQDPRPGNDVASAETAGPPSPSGIRAQDR----APRHRRAPPAR----MPVAPAPS 135
+ RP + + A P P +R+Q R R R AP R +PA
Sbjct: 374 TGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARR 433
Query: 136 ADGEPLQEQGGGLFHRTR 153
A + +EQ L R R
Sbjct: 434 ARSQSREEQAVLLVRRDR 451
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 51 PGFCTWS----SPDEDKRPRKPVPGTGNRDSGTR------RRLQDATEQDPRP------- 93
P CT+S SP RP PVPG+ R S R ++ E PRP
Sbjct: 286 PRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPH 345
Query: 94 ------GNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGEP 140
D S+ ++ P G R+ D RR P+R P++ P
Sbjct: 346 PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRP 398
Score = 28.5 bits (62), Expect = 3.4
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 29/138 (21%)
Query: 41 PSLFPLGLWAPGFCTWSSPDEDKRPRKPVPG-------TGNRDS----------GTRRRL 83
P + P+ L + T P+ RPR +P +G+ DS GTR
Sbjct: 318 PEMTPVSLRS----TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDD 373
Query: 84 QDATEQDPRPGNDVASAETAGPPSPSGIRAQDR----APRHRRAPPAR----MPVAPAPS 135
+ RP + + A P P +R+Q R R R AP R +PA
Sbjct: 374 TGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARR 433
Query: 136 ADGEPLQEQGGGLFHRTR 153
A + +EQ L R R
Sbjct: 434 ARSQSREEQAVLLVRRDR 451
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 57 SSPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGP-------PSPS 109
S+P D+ P P P + + + E + + VA + A P PSP+
Sbjct: 59 SAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELPPSPA 118
Query: 110 GIRAQDRAPRHRRAPPARMPVAPA--PSADGEPLQEQ 144
Q AP R PP PVAPA P A G+ Q
Sbjct: 119 SPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQ 155
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 57 SSPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGP-------PSPS 109
S+P D+ P P P + + + E + + VA + A P PSP+
Sbjct: 59 SAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELPPSPA 118
Query: 110 GIRAQDRAPRHRRAPPARMPVAPA--PSADGEPLQEQ 144
Q AP R PP PVAPA P A G+ Q
Sbjct: 119 SPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQ 155
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 36.6 bits (83), Expect = 0.012
Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Query: 56 WSSPDEDKRPRKPVPGTGNRDSGTRRRLQ-------DATEQDPRPGNDVASAETAGPPSP 108
W P + P PG R L+ D + ++ R G+ + AG +
Sbjct: 4 WLRPSQAVYPAAAAPGQEPTPQSHPRWLRRAPVSGPDLSSEEERVGSQGQAGPQAGRDAL 63
Query: 109 SGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGG 146
G R R PR R P R PV P A E L G
Sbjct: 64 LGFRDVPREPRRTRKPATRAPVLQVPPAGHEGLGAASG 101
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 36.6 bits (83), Expect = 0.012
Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Query: 56 WSSPDEDKRPRKPVPGTGNRDSGTRRRLQ-------DATEQDPRPGNDVASAETAGPPSP 108
W P + P PG R L+ D + ++ R G+ + AG +
Sbjct: 4 WLRPSQAVYPAAAAPGQEPTPQSHPRWLRRAPVSGPDLSSEEERVGSQGQAGPQAGRDAL 63
Query: 109 SGIRAQDRAPRHRRAPPARMPVAPAPSADGEPLQEQGG 146
G R R PR R P R PV P A E L G
Sbjct: 64 LGFRDVPREPRRTRKPATRAPVLQVPPAGHEGLGAASG 101
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 36.2 bits (82), Expect = 0.016
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 21 NKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGTR 80
N ++S R+ TS V +L P+ AP T + P P + ++
Sbjct: 135 NATTISSRE---NVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
Query: 81 RRLQDATEQDPRPGNDVASAETAGPPSPSGIR----AQDRAPRHRRAPPARMPVAPAPSA 136
AT Q P P + TA PP+P + P APP PAP +
Sbjct: 192 PPTPSATTQAP-PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 137 DGEP 140
P
Sbjct: 251 SSAP 254
Score = 32.7 bits (73), Expect = 0.18
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 50 APGFCTWSSPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPS 109
AP T + P + P + ++ AT P P + TA PP+PS
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP-PSSSAPPETTAAPPTPS 242
Query: 110 GIRAQDRAPRHRRAPPARMPVAPAPSA 136
A AP APP V P PSA
Sbjct: 243 ---ATTPAPLSSSAPPETTAVPPTPSA 266
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 36.2 bits (82), Expect = 0.016
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 21 NKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGTR 80
N ++S R+ TS V +L P+ AP T + P P + ++
Sbjct: 135 NATTISSRE---NVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
Query: 81 RRLQDATEQDPRPGNDVASAETAGPPSPSGIR----AQDRAPRHRRAPPARMPVAPAPSA 136
AT Q P P + TA PP+P + P APP PAP +
Sbjct: 192 PPTPSATTQAP-PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 137 DGEP 140
P
Sbjct: 251 SSAP 254
Score = 32.7 bits (73), Expect = 0.18
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 50 APGFCTWSSPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPS 109
AP T + P + P + ++ AT P P + TA PP+PS
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP-PSSSAPPETTAAPPTPS 242
Query: 110 GIRAQDRAPRHRRAPPARMPVAPAPSA 136
A AP APP V P PSA
Sbjct: 243 ---ATTPAPLSSSAPPETTAVPPTPSA 266
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 36.2 bits (82), Expect = 0.016
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 21 NKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGTR 80
N ++S R+ TS V +L P+ AP T + P P + ++
Sbjct: 135 NATTISSRE---NVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
Query: 81 RRLQDATEQDPRPGNDVASAETAGPPSPSGIR----AQDRAPRHRRAPPARMPVAPAPSA 136
AT Q P P + TA PP+P + P APP PAP +
Sbjct: 192 PPTPSATTQAP-PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLS 250
Query: 137 DGEP 140
P
Sbjct: 251 SSAP 254
Score = 32.7 bits (73), Expect = 0.18
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 50 APGFCTWSSPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPS 109
AP T + P + P + ++ AT P P + TA PP+PS
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP-PSSSAPPETTAAPPTPS 242
Query: 110 GIRAQDRAPRHRRAPPARMPVAPAPSA 136
A AP APP V P PSA
Sbjct: 243 ---ATTPAPLSSSAPPETTAVPPTPSA 266
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.4 bits (80), Expect = 0.028
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 58 SPDEDKRP-----RKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIR 112
+P K P ++P P T + T + T ++P P ++ T PSP+
Sbjct: 365 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT--T 422
Query: 113 AQDRAPRHRRAPPARMPVAPAPSADGEP 140
++ AP + P P PAP+ EP
Sbjct: 423 TKEPAPTTPKEPAPTTPKKPAPTTPKEP 450
Score = 34.3 bits (77), Expect = 0.061
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP-----RKPVPGTGNRD 76
+P+ + + PA T + P+ T S+P K P +KP P T
Sbjct: 269 EPAPTTPKEPAPTTTKEPAPTT-----------TKSAPTTPKEPAPTTPKKPAPTTPKEP 317
Query: 77 SGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSA 136
+ T T ++P P A T P+P+ ++ AP + P P PAP+
Sbjct: 318 APT-------TPKEPTPTTPKEPAPTTKEPAPT--TPKEPAPTAPKKPAPTTPKEPAPTT 368
Query: 137 DGEP 140
EP
Sbjct: 369 PKEP 372
Score = 31.6 bits (70), Expect = 0.40
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGT 79
P KP+ + + PA + P+ P T P P++ P T + + T
Sbjct: 439 PKKPAPTTPKEPAPTTPKEPAPTTTK----KPAPTTPKEP-APTTPKETAPTTPKKLTPT 493
Query: 80 R-RRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
+L T + P P A T P P+ ++ AP +A P PAP+
Sbjct: 494 TPEKLAPTTPEKPAPTTPEELAPTT-PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 552
Query: 139 EP 140
EP
Sbjct: 553 EP 554
Score = 30.4 bits (67), Expect = 0.89
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 18/130 (13%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPG----FCTWSSPDEDKRP-----RKPVP 70
P +P+ + + PA + P+ P T S+P K P ++P P
Sbjct: 213 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 272
Query: 71 GTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPV 130
T + T T ++P P ++ T P+P+ + AP + P P
Sbjct: 273 TTPKEPAPT-------TTKEPAPTTTKSAPTTPKEPAPT--TPKKPAPTTPKEPAPTTPK 323
Query: 131 APAPSADGEP 140
P P+ EP
Sbjct: 324 EPTPTTPKEP 333
Score = 29.6 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 65 PRKPVPGTGNRDSGTR-RRLQDATEQDPRPGNDVASAETAGPPS-----PSGIRAQDRAP 118
P++P P T + T + T + P P ++A T GP S P+ ++ AP
Sbjct: 636 PKEPAPTTPKGTAPTTLKEPAPTTPKKPAP-KELAPTTTKGPTSTTSDKPAPTTPKETAP 694
Query: 119 RHRRAPPARMPVAPAPSADGEP 140
+ P P PAP+ P
Sbjct: 695 TTPKEPAPTTPKKPAPTTPETP 716
Score = 29.3 bits (64), Expect = 2.0
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 25/121 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDE--DKRPRKPVPGTGNRDSGT 79
KP+ + + PA + P+ P T ++P++ P KP P T
Sbjct: 465 KPAPTTPKEPAPTTPKETAPT-------TPKKLTPTTPEKLAPTTPEKPAPTTPEE---- 513
Query: 80 RRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGE 139
L T ++P P P P+ + AP + P P PAP+ E
Sbjct: 514 ---LAPTTPEEPTPTT---------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 561
Query: 140 P 140
P
Sbjct: 562 P 562
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.028
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 58 SPDEDKRP-----RKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIR 112
+P K P ++P P T + T + T ++P P ++ T PSP+
Sbjct: 406 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT--T 463
Query: 113 AQDRAPRHRRAPPARMPVAPAPSADGEP 140
++ AP + P P PAP+ EP
Sbjct: 464 TKEPAPTTPKEPAPTTPKKPAPTTPKEP 491
Score = 34.3 bits (77), Expect = 0.061
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP-----RKPVPGTGNRD 76
+P+ + + PA T + P+ T S+P K P +KP P T
Sbjct: 310 EPAPTTPKEPAPTTTKEPAPTT-----------TKSAPTTPKEPAPTTPKKPAPTTPKEP 358
Query: 77 SGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSA 136
+ T T ++P P A T P+P+ ++ AP + P P PAP+
Sbjct: 359 APT-------TPKEPTPTTPKEPAPTTKEPAPT--TPKEPAPTAPKKPAPTTPKEPAPTT 409
Query: 137 DGEP 140
EP
Sbjct: 410 PKEP 413
Score = 31.6 bits (70), Expect = 0.40
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGT 79
P KP+ + + PA + P+ P T P P++ P T + + T
Sbjct: 480 PKKPAPTTPKEPAPTTPKEPAPTTTK----KPAPTTPKEP-APTTPKETAPTTPKKLTPT 534
Query: 80 R-RRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
+L T + P P A T P P+ ++ AP +A P PAP+
Sbjct: 535 TPEKLAPTTPEKPAPTTPEELAPTT-PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 593
Query: 139 EP 140
EP
Sbjct: 594 EP 595
Score = 30.4 bits (67), Expect = 0.89
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 18/130 (13%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPG----FCTWSSPDEDKRP-----RKPVP 70
P +P+ + + PA + P+ P T S+P K P ++P P
Sbjct: 254 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 313
Query: 71 GTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPV 130
T + T T ++P P ++ T P+P+ + AP + P P
Sbjct: 314 TTPKEPAPT-------TTKEPAPTTTKSAPTTPKEPAPT--TPKKPAPTTPKEPAPTTPK 364
Query: 131 APAPSADGEP 140
P P+ EP
Sbjct: 365 EPTPTTPKEP 374
Score = 29.6 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 65 PRKPVPGTGNRDSGTR-RRLQDATEQDPRPGNDVASAETAGPPS-----PSGIRAQDRAP 118
P++P P T + T + T + P P ++A T GP S P+ ++ AP
Sbjct: 677 PKEPAPTTPKGTAPTTLKEPAPTTPKKPAP-KELAPTTTKGPTSTTSDKPAPTTPKETAP 735
Query: 119 RHRRAPPARMPVAPAPSADGEP 140
+ P P PAP+ P
Sbjct: 736 TTPKEPAPTTPKKPAPTTPETP 757
Score = 29.3 bits (64), Expect = 2.0
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 25/121 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDE--DKRPRKPVPGTGNRDSGT 79
KP+ + + PA + P+ P T ++P++ P KP P T
Sbjct: 506 KPAPTTPKEPAPTTPKETAPT-------TPKKLTPTTPEKLAPTTPEKPAPTTPEE---- 554
Query: 80 RRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGE 139
L T ++P P P P+ + AP + P P PAP+ E
Sbjct: 555 ---LAPTTPEEPTPTT---------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 602
Query: 140 P 140
P
Sbjct: 603 P 603
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.4 bits (80), Expect = 0.028
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 58 SPDEDKRP-----RKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIR 112
+P K P ++P P T + T + T ++P P ++ T PSP+
Sbjct: 458 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT--T 515
Query: 113 AQDRAPRHRRAPPARMPVAPAPSADGEP 140
++ AP + P P PAP+ EP
Sbjct: 516 TKEPAPTTPKEPAPTTPKKPAPTTPKEP 543
Score = 34.3 bits (77), Expect = 0.061
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP-----RKPVPGTGNRD 76
+P+ + + PA T + P+ T S+P K P +KP P T
Sbjct: 362 EPAPTTPKEPAPTTTKEPAPTT-----------TKSAPTTPKEPAPTTPKKPAPTTPKEP 410
Query: 77 SGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSA 136
+ T T ++P P A T P+P+ ++ AP + P P PAP+
Sbjct: 411 APT-------TPKEPTPTTPKEPAPTTKEPAPT--TPKEPAPTAPKKPAPTTPKEPAPTT 461
Query: 137 DGEP 140
EP
Sbjct: 462 PKEP 465
Score = 31.6 bits (70), Expect = 0.40
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGT 79
P KP+ + + PA + P+ P T P P++ P T + + T
Sbjct: 532 PKKPAPTTPKEPAPTTPKEPAPTTTK----KPAPTTPKEP-APTTPKETAPTTPKKLTPT 586
Query: 80 R-RRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
+L T + P P A T P P+ ++ AP +A P PAP+
Sbjct: 587 TPEKLAPTTPEKPAPTTPEELAPTT-PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 645
Query: 139 EP 140
EP
Sbjct: 646 EP 647
Score = 30.4 bits (67), Expect = 0.89
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 18/130 (13%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPG----FCTWSSPDEDKRP-----RKPVP 70
P +P+ + + PA + P+ P T S+P K P ++P P
Sbjct: 306 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 365
Query: 71 GTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPV 130
T + T T ++P P ++ T P+P+ + AP + P P
Sbjct: 366 TTPKEPAPT-------TTKEPAPTTTKSAPTTPKEPAPT--TPKKPAPTTPKEPAPTTPK 416
Query: 131 APAPSADGEP 140
P P+ EP
Sbjct: 417 EPTPTTPKEP 426
Score = 29.6 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 65 PRKPVPGTGNRDSGTR-RRLQDATEQDPRPGNDVASAETAGPPS-----PSGIRAQDRAP 118
P++P P T + T + T + P P ++A T GP S P+ ++ AP
Sbjct: 729 PKEPAPTTPKGTAPTTLKEPAPTTPKKPAP-KELAPTTTKGPTSTTSDKPAPTTPKETAP 787
Query: 119 RHRRAPPARMPVAPAPSADGEP 140
+ P P PAP+ P
Sbjct: 788 TTPKEPAPTTPKKPAPTTPETP 809
Score = 29.3 bits (64), Expect = 2.0
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 25/121 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDE--DKRPRKPVPGTGNRDSGT 79
KP+ + + PA + P+ P T ++P++ P KP P T
Sbjct: 558 KPAPTTPKEPAPTTPKETAPT-------TPKKLTPTTPEKLAPTTPEKPAPTTPEE---- 606
Query: 80 RRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGE 139
L T ++P P P P+ + AP + P P PAP+ E
Sbjct: 607 ---LAPTTPEEPTPTT---------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 654
Query: 140 P 140
P
Sbjct: 655 P 655
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.4 bits (80), Expect = 0.028
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 58 SPDEDKRP-----RKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIR 112
+P K P ++P P T + T + T ++P P ++ T PSP+
Sbjct: 499 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT--T 556
Query: 113 AQDRAPRHRRAPPARMPVAPAPSADGEP 140
++ AP + P P PAP+ EP
Sbjct: 557 TKEPAPTTPKEPAPTTPKKPAPTTPKEP 584
Score = 34.3 bits (77), Expect = 0.061
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP-----RKPVPGTGNRD 76
+P+ + + PA T + P+ T S+P K P +KP P T
Sbjct: 403 EPAPTTPKEPAPTTTKEPAPTT-----------TKSAPTTPKEPAPTTPKKPAPTTPKEP 451
Query: 77 SGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSA 136
+ T T ++P P A T P+P+ ++ AP + P P PAP+
Sbjct: 452 APT-------TPKEPTPTTPKEPAPTTKEPAPT--TPKEPAPTAPKKPAPTTPKEPAPTT 502
Query: 137 DGEP 140
EP
Sbjct: 503 PKEP 506
Score = 31.6 bits (70), Expect = 0.40
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRPRKPVPGTGNRDSGT 79
P KP+ + + PA + P+ P T P P++ P T + + T
Sbjct: 573 PKKPAPTTPKEPAPTTPKEPAPTTTK----KPAPTTPKEP-APTTPKETAPTTPKKLTPT 627
Query: 80 R-RRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
+L T + P P A T P P+ ++ AP +A P PAP+
Sbjct: 628 TPEKLAPTTPEKPAPTTPEELAPTT-PEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 686
Query: 139 EP 140
EP
Sbjct: 687 EP 688
Score = 30.4 bits (67), Expect = 0.89
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 18/130 (13%)
Query: 20 PNKPSLSGRQAPAQAQTSDLVPSLFPLGLWAPG----FCTWSSPDEDKRP-----RKPVP 70
P +P+ + + PA + P+ P T S+P K P ++P P
Sbjct: 347 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 406
Query: 71 GTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPV 130
T + T T ++P P ++ T P+P+ + AP + P P
Sbjct: 407 TTPKEPAPT-------TTKEPAPTTTKSAPTTPKEPAPT--TPKKPAPTTPKEPAPTTPK 457
Query: 131 APAPSADGEP 140
P P+ EP
Sbjct: 458 EPTPTTPKEP 467
Score = 29.6 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 65 PRKPVPGTGNRDSGTR-RRLQDATEQDPRPGNDVASAETAGPPS-----PSGIRAQDRAP 118
P++P P T + T + T + P P ++A T GP S P+ ++ AP
Sbjct: 770 PKEPAPTTPKGTAPTTLKEPAPTTPKKPAP-KELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Query: 119 RHRRAPPARMPVAPAPSADGEP 140
+ P P PAP+ P
Sbjct: 829 TTPKEPAPTTPKKPAPTTPETP 850
Score = 29.3 bits (64), Expect = 2.0
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 25/121 (20%)
Query: 22 KPSLSGRQAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDE--DKRPRKPVPGTGNRDSGT 79
KP+ + + PA + P+ P T ++P++ P KP P T
Sbjct: 599 KPAPTTPKEPAPTTPKETAPT-------TPKKLTPTTPEKLAPTTPEKPAPTTPEE---- 647
Query: 80 RRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADGE 139
L T ++P P P P+ + AP + P P PAP+ E
Sbjct: 648 ---LAPTTPEEPTPTT---------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Query: 140 P 140
P
Sbjct: 696 P 696
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 35.4 bits (80), Expect = 0.028
Identities = 48/174 (27%), Positives = 61/174 (35%), Gaps = 28/174 (16%)
Query: 17 RIGPNKPSLSGRQAP-AQAQTSDLVPSLFPLG--LWAPGFCT-WSSPDEDKRPRKPVPGT 72
+I P +S P A A S P LF G L P +C W SP ++ P
Sbjct: 32 QISDPDPWISASDPPLAPALPSGTAPFLFSPGVLLPEPEYCPPWRSPKKES----PKISQ 87
Query: 73 GNRDSGTRRRLQDATEQDPRP-----GNDVASAETAGPPSPSGIRAQDRAPRHRRAPPAR 127
R+S R L P P + A GPP PS D H R P+
Sbjct: 88 RWRESKPRGNLTYHQYMPPEPRQGSRADPQAEGSALGPPGPSLWEGTDSQQPHPRMKPS- 146
Query: 128 MPVAPAPSADGEPLQEQGGGLFHRTRSVYNGLELNTWMKVERLFVEKFHQSFSL 181
P+ P P P + LEL T +K+E L V + Q L
Sbjct: 147 -PLTPCPPGVPSPSPPP------------HKLELQT-LKLEELTVSELRQQLRL 186
>gi|212286156 zinc finger and BTB domain containing 42 [Homo
sapiens]
Length = 422
Score = 35.4 bits (80), Expect = 0.028
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 82 RLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRA--PPARMPVAPAPSADGE 139
RLQ+ ++ PGN AE A PP P + D P R+A PP + A P A G
Sbjct: 117 RLQEK-DRSLDPGNPAPGAEPAQPPCPWPVWTADLCPAARKAKLPPFGVKAALPPRASGP 175
Query: 140 P 140
P
Sbjct: 176 P 176
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 35.4 bits (80), Expect = 0.028
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 57 SSPDEDKRPRKPVPGTGNRDSGTRRRLQD-------ATEQDPRPGNDVASAETAGPPSPS 109
S+P P +P P + G R Q + P VAS A PSP+
Sbjct: 669 STPTSAPAPTQPAPTPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPAPAPAPSPA 728
Query: 110 GIRAQDRAPRHRRAP-PARMPVA-PAP---SADGEPLQEQGGGL 148
RAQ AP R P PA PVA PAP SA G+ L++ GL
Sbjct: 729 PARAQ--APASARDPAPAPAPVAGPAPASTSAPGDSLEQHFTGL 770
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 34.7 bits (78), Expect = 0.047
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 22/126 (17%)
Query: 19 GPNKPSLSGR-QAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP----RKPVPGTG 73
GP PS + P++ Q + L PS P S+ D K P R P+P +
Sbjct: 956 GPLPPSADDNLKTPSERQLTPLPPSAPP-----------SADDNIKTPAERLRGPLPPSA 1004
Query: 74 NRDSGTRR-RLQDATEQDPRPGNDVASAETAGPPSPSGIRAQD----RAPRHRRAPPARM 128
+ + T Q+A + PR +AE PP P R D R P+ RRA
Sbjct: 1005 DDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKPKRRRAADVE- 1063
Query: 129 PVAPAP 134
P +P P
Sbjct: 1064 PSSPEP 1069
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.7 bits (78), Expect = 0.047
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 91 PRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
P+PG + G P+P+ A AP + P PVAPAPSADG
Sbjct: 285 PQPGPHLPPL---GLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.7 bits (78), Expect = 0.047
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 91 PRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAPSADG 138
P+PG + G P+P+ A AP + P PVAPAPSADG
Sbjct: 285 PQPGPHLPPL---GLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 34.7 bits (78), Expect = 0.047
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 22/126 (17%)
Query: 19 GPNKPSLSGR-QAPAQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDKRP----RKPVPGTG 73
GP PS + P++ Q + L PS P S+ D K P R P+P +
Sbjct: 501 GPLPPSADDNLKTPSERQLTPLPPSAPP-----------SADDNIKTPAERLRGPLPPSA 549
Query: 74 NRDSGTRR-RLQDATEQDPRPGNDVASAETAGPPSPSGIRAQD----RAPRHRRAPPARM 128
+ + T Q+A + PR +AE PP P R D R P+ RRA
Sbjct: 550 DDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKPKRRRAADVE- 608
Query: 129 PVAPAP 134
P +P P
Sbjct: 609 PSSPEP 614
>gi|110624768 hypothetical protein LOC283777 [Homo sapiens]
Length = 192
Score = 34.7 bits (78), Expect = 0.047
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 61 EDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPP 106
++ RPR+P PG G+++ L+D T+ DP G + A AG P
Sbjct: 139 QNDRPRQPAPGDGSKERMCGEELED-TKDDPECGVEEEDAGLAGQP 183
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 34.3 bits (77), Expect = 0.061
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 70 PGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMP 129
PG+ ++ S R R + +P + AS+ A P P+ + +P +PPA P
Sbjct: 1062 PGSSDKPSDPRVRKAPTDPRLQKPTDSTASSRAA-KPGPAEAPSPTASPSGDASPPATAP 1120
Query: 130 VAPAPSADGEPLQEQGGGLFHRTRSVYNGLEL 161
P A G Q GGG SV +G+ L
Sbjct: 1121 YDPRVLAAGGLGQGGGGG----QSSVLSGISL 1148
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 34.3 bits (77), Expect = 0.061
Identities = 26/99 (26%), Positives = 34/99 (34%), Gaps = 19/99 (19%)
Query: 59 PDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETA-----GPPSPSGIRA 113
P +P +P P GN+ G P+ GN SA + GPP G +
Sbjct: 135 PPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKP 194
Query: 114 QDRAP--------------RHRRAPPARMPVAPAPSADG 138
Q P + +APPA P P P G
Sbjct: 195 QGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQG 233
Score = 27.7 bits (60), Expect = 5.7
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 22/81 (27%)
Query: 59 PDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRAP 118
P +P +P P GN+ GT P PG + PP G ++
Sbjct: 93 PPHPGKPERPPPQGGNQSQGT----------PPPPG------KPERPPPQGGNQS----- 131
Query: 119 RHRRAPPARMPVAPAPSADGE 139
HR PP P P P +
Sbjct: 132 -HRPPPPPGKPERPPPQGGNQ 151
>gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]
Length = 410
Score = 34.3 bits (77), Expect = 0.061
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 60 DEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGP-PSPSGIRAQDRAP 118
D D+ P + GNRD R + E+DP G + AGP G+ + R
Sbjct: 54 DGDRDPERDQERDGNRDRNRDRERERERERDPDRGPRRDTHRDAGPRAGEHGVWEKPRQS 113
Query: 119 RHRRAP-----PARMPVAPAPSADGEPLQEQGGG 147
R R A P PAP EP Q Q G
Sbjct: 114 RTRDGARGLTWDAAAPPGPAPWEAPEPPQPQRKG 147
>gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens]
Length = 401
Score = 34.3 bits (77), Expect = 0.061
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 60 DEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGP-PSPSGIRAQDRAP 118
D D+ P + GNRD R + E+DP G + AGP G+ + R
Sbjct: 54 DGDRDPERDQERDGNRDRNRDRERERERERDPDRGPRRDTHRDAGPRAGEHGVWEKPRQS 113
Query: 119 RHRRAP-----PARMPVAPAPSADGEPLQEQGGG 147
R R A P PAP EP Q Q G
Sbjct: 114 RTRDGARGLTWDAAAPPGPAPWEAPEPPQPQRKG 147
>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
Length = 1484
Score = 34.3 bits (77), Expect = 0.061
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 58 SPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRA 117
SP + R+ PG DS RL E DP +D + ++ P P G+ QD
Sbjct: 641 SPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEP-GVEPQDSR 699
Query: 118 PRHRRAPPARMPVAPAPSADGEP 140
R + P +P A GEP
Sbjct: 700 RRSPQEGPTWSRGRRSPRAPGEP 722
>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo
sapiens]
Length = 1554
Score = 34.3 bits (77), Expect = 0.061
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 58 SPDEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDRA 117
SP + R+ PG DS RL E DP +D + ++ P P G+ QD
Sbjct: 711 SPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEP-GVEPQDSR 769
Query: 118 PRHRRAPPARMPVAPAPSADGEP 140
R + P +P A GEP
Sbjct: 770 RRSPQEGPTWSRGRRSPRAPGEP 792
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 33.9 bits (76), Expect = 0.080
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 60 DEDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGP---PSPSGIRAQDR 116
D D+ P+ P P +G D +++ Q +Q P P A + GP P P ++ Q +
Sbjct: 14 DLDEDPKCPCPSSG--DEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQ 71
Query: 117 APRHRRAPPARMPVAPAPSADGEPLQEQGGGLFHRTRSVY 156
+ ++ P++ +P+ GL H + + +
Sbjct: 72 QQQQQQQQQPPHPLSQLAQLQSQPVHP---GLLHSSPTAF 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,420,900
Number of Sequences: 37866
Number of extensions: 606877
Number of successful extensions: 4293
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 373
Number of HSP's that attempted gapping in prelim test: 3661
Number of HSP's gapped (non-prelim): 930
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.