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Search of human proteins with 214010175
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|214010175 CLIP-associating protein 1 isoform 3 [Homo
sapiens]
(1471 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens] 2865 0.0
gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] 2858 0.0
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens] 2806 0.0
gi|57863301 CLIP-associating protein 2 [Homo sapiens] 1923 0.0
gi|93102424 hypothetical protein LOC23116 [Homo sapiens] 62 4e-09
gi|161016767 mucin 21 [Homo sapiens] 55 5e-07
gi|57222563 colonic and hepatic tumor over-expressed protein iso... 54 9e-07
gi|57164942 colonic and hepatic tumor over-expressed protein iso... 54 9e-07
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 52 6e-06
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 50 1e-05
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 49 4e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 49 4e-05
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 49 5e-05
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 49 5e-05
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 48 6e-05
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 47 1e-04
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 46 2e-04
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 46 2e-04
gi|28559039 mediator complex subunit 1 [Homo sapiens] 46 2e-04
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 46 2e-04
gi|161019170 mucin 5AC [Homo sapiens] 46 3e-04
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 46 3e-04
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 45 7e-04
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 45 7e-04
gi|91982772 mucin 17 [Homo sapiens] 45 7e-04
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 45 7e-04
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 43 0.002
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 43 0.002
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 43 0.003
gi|236459851 ubinuclein 2 [Homo sapiens] 43 0.003
>gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens]
Length = 1471
Score = 2865 bits (7428), Expect = 0.0
Identities = 1471/1471 (100%), Positives = 1471/1471 (100%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI
Sbjct: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
Query: 721 PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSK 780
PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSK
Sbjct: 721 PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSK 780
Query: 781 KKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSN 840
KKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSN
Sbjct: 781 KKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSN 840
Query: 841 WSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIH 900
WSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIH
Sbjct: 841 WSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIH 900
Query: 901 KDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQ 960
KDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQ
Sbjct: 901 KDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQ 960
Query: 961 TPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLI 1020
TPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLI
Sbjct: 961 TPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLI 1020
Query: 1021 SLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRT 1080
SLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRT
Sbjct: 1021 SLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRT 1080
Query: 1081 SPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRD 1140
SPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRD
Sbjct: 1081 SPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRD 1140
Query: 1141 GKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPY 1200
GKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPY
Sbjct: 1141 GKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPY 1200
Query: 1201 PYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLE 1260
PYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLE
Sbjct: 1201 PYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLE 1260
Query: 1261 LLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAEL 1320
LLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAEL
Sbjct: 1261 LLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAEL 1320
Query: 1321 TIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQT 1380
TIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQT
Sbjct: 1321 TIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQT 1380
Query: 1381 KVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLT 1440
KVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLT
Sbjct: 1381 KVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLT 1440
Query: 1441 GSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
GSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1441 GSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
>gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens]
Length = 1479
Score = 2858 bits (7409), Expect = 0.0
Identities = 1471/1479 (99%), Positives = 1471/1479 (99%), Gaps = 8/1479 (0%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--------GRIRTRRQSSGSATN 652
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL GRIRTRRQSSGSATN
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLDGTTTKAEGRIRTRRQSSGSATN 660
Query: 653 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 712
VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP
Sbjct: 661 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTP 720
Query: 713 SSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADAL 772
SSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADAL
Sbjct: 721 SSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADAL 780
Query: 773 LLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEV 832
LLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEV
Sbjct: 781 LLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEV 840
Query: 833 LNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLET 892
LNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLET
Sbjct: 841 LNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLET 900
Query: 893 LVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILM 952
LVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILM
Sbjct: 901 LVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILM 960
Query: 953 RFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVR 1012
RFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVR
Sbjct: 961 RFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVR 1020
Query: 1013 KAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTP 1072
KAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTP
Sbjct: 1021 KAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTP 1080
Query: 1073 SRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQED 1132
SRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQED
Sbjct: 1081 SRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQED 1140
Query: 1133 LNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGP 1192
LNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGP
Sbjct: 1141 LNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGP 1200
Query: 1193 RARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVE 1252
RARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVE
Sbjct: 1201 RARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVE 1260
Query: 1253 ERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPA 1312
ERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPA
Sbjct: 1261 ERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPA 1320
Query: 1313 RFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPIN 1372
RFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPIN
Sbjct: 1321 RFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPIN 1380
Query: 1373 LAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDL 1432
LAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDL
Sbjct: 1381 LAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDL 1440
Query: 1433 KPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
KPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1441 KPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1479
>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
Length = 1538
Score = 2806 bits (7274), Expect = 0.0
Identities = 1463/1546 (94%), Positives = 1463/1546 (94%), Gaps = 83/1546 (5%)
Query: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
Sbjct: 1 MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN 60
Query: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
Sbjct: 61 SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD 120
Query: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
Sbjct: 121 QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN 180
Query: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
Sbjct: 181 SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
Sbjct: 241 FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE 300
Query: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
Sbjct: 301 DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD 360
Query: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
Sbjct: 361 NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN 420
Query: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
Sbjct: 421 SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 480
Query: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
Sbjct: 481 ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL 540
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
Sbjct: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR
Sbjct: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI
Sbjct: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
Query: 721 PRSQGCSRETSPNRIGL------------------------------------DRFGLGQ 744
PRSQGCSRETSPNRIGL DRFGLGQ
Sbjct: 721 PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQ 780
Query: 745 PGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDAS 804
PGRIPGSVNAMRVLSTSTDLEAAVADAL KKPVRRRYEPYGMYSDDDANSDAS
Sbjct: 781 PGRIPGSVNAMRVLSTSTDLEAAVADAL--------KKPVRRRYEPYGMYSDDDANSDAS 832
Query: 805 SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV 864
SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV
Sbjct: 833 SVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRV 892
Query: 865 ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL 924
ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL
Sbjct: 893 ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL 952
Query: 925 GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT 984
GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT
Sbjct: 953 GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT 1012
Query: 985 DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG 1044
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG
Sbjct: 1013 DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG 1072
Query: 1045 ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPS------- 1097
ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPS
Sbjct: 1073 ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSRLWGWSA 1132
Query: 1098 --------------------------------MLDYDTENLNSEEIYSSLRGVTEAIEKF 1125
MLDYDTENLNSEEIYSSLRGVTEAIEKF
Sbjct: 1133 DGLAKHPPPFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKF 1192
Query: 1126 SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP 1185
SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP
Sbjct: 1193 SFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQP 1252
Query: 1186 PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS 1245
PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS
Sbjct: 1253 PRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELS 1312
Query: 1246 NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE 1305
NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE
Sbjct: 1313 NHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLRE 1372
Query: 1306 ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ 1365
ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ
Sbjct: 1373 ILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQ 1432
Query: 1366 TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY 1425
TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY
Sbjct: 1433 TADYPINLAAIKMQTKVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIY 1492
Query: 1426 SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
Sbjct: 1493 SVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1538
>gi|57863301 CLIP-associating protein 2 [Homo sapiens]
Length = 1506
Score = 1923 bits (4981), Expect = 0.0
Identities = 1029/1531 (67%), Positives = 1200/1531 (78%), Gaps = 85/1531 (5%)
Query: 1 MEPR-MESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWV 59
MEPR ME AQV QKDVG RLQVGQEL+ Y +DLE D L K VD L T WV
Sbjct: 1 MEPRSMEYFCAQVQQKDVGGRLQVGQELLLYLGAPGAISDLEEDLGRLGKTVDAL-TGWV 59
Query: 60 NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIM 119
SSNY+V L+G++ILSA V RL RFK+ + V+ +LIDR+GDAKD VR++ QTL+LK+M
Sbjct: 60 GSSNYRVSLMGLEILSAFVDRLSTRFKSYVAMVIVALIDRMGDAKDKVRDEAQTLILKLM 119
Query: 120 DQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDP 179
DQ A P Y+W+++ GFKHKNFR+REG+CLCLI TLN GAQ L +SK++PH+C L GD
Sbjct: 120 DQVAPPMYIWEQLASGFKHKNFRSREGVCLCLIETLNIFGAQPLVISKLIPHLCILFGDS 179
Query: 180 NSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSA-ND 238
NSQVRDAAI ++VEIYRHVGE+VR DL K+G+P +RL +IF KFDEVQ SG MI S D
Sbjct: 180 NSQVRDAAILAIVEIYRHVGEKVRMDLYKRGIPPARLEMIFAKFDEVQSSGGMILSVCKD 239
Query: 239 KNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEG-AGAV 297
K+FDDE+SVDGNRPSSA+S P + N + R+ GS+ A+KEG AGAV
Sbjct: 240 KSFDDEESVDGNRPSSAASAFKVPAPKTSGNPA-NSARKPGSAGGPKVGGASKEGGAGAV 298
Query: 298 DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAA 357
DE+DFIKAF DVP +QIYSSR+LEE++NKIREILSDDKHDW+QR NALKKIRSLL+AGAA
Sbjct: 299 DEDDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAA 358
Query: 358 EYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNL 417
+YD FFQHLRLLDGA KLSAKDLRSQVVREACIT+ HLS+VLGNKFDHGAEAI+PT+FNL
Sbjct: 359 QYDCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNL 418
Query: 418 IPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQT 477
+PNSAK+MATSG A+R IIRHTH+PRLIP+ITSNCTSKSV VRRR FEFLDLLLQEWQT
Sbjct: 419 VPNSAKVMATSGCAAIRFIIRHTHVPRLIPLITSNCTSKSVPVRRRSFEFLDLLLQEWQT 478
Query: 478 HSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQ 537
HSLERH +VL ETIKKGIHDAD+EAR+EARK Y G +HF EAE LY++LE SYQK+LQ
Sbjct: 479 HSLERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQ 538
Query: 538 SHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTT--SRASTVSTKSVSTTGSL 595
++LK+S S+ SLPQSDRSSSSSQESLNRP S+K S +T R S S+K+ S GSL
Sbjct: 539 TYLKSSGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVSAGSSKASSLPGSL 598
Query: 596 QRSRSDIDVNAAASAKSK-VSSSSGTTPFSSAAALPPGSYASL--------------GRI 640
QRSRSDIDVNAAA AK+ + S + A AL GSYASL GR+
Sbjct: 599 QRSRSDIDVNAAAGAKAHHAAGQSVRSGRLGAGALNAGSYASLEDTSDKLDGTASEDGRV 658
Query: 641 RTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGS-GYGG 699
R + + + A D+RGRSR K+VSQSQ GSRS SPG++L +
Sbjct: 659 RAKLSAPLAGMGNAKA-DSRGRSRTKMVSQSQ---------PGSRSGSPGRVLTTTALST 708
Query: 700 LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDR-------------------- 739
++ G R + S++KRSKIPRSQGCSRE SP+R+ + R
Sbjct: 709 VSSGVQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCSREASRE 768
Query: 740 -----------------FGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKK 782
+G+ Q R+ SV+AMRVL+T +D+E AVADAL KK
Sbjct: 769 SSRDTSPVRSFQPLGPGYGISQSSRLSSSVSAMRVLNTGSDVEEAVADAL--------KK 820
Query: 783 PVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWS 842
P RRRYE YGM+SDDDANSDASS CSERSY SRNG IP Y+RQTEDVAEVLN CASSNWS
Sbjct: 821 PARRRYESYGMHSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASSNWS 880
Query: 843 ERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKD 902
ERKEGLLGLQNLLK+QRTLSRVELKRLCEIFTRMFADPH KRVFSMFLETLVDFI +HKD
Sbjct: 881 ERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHGKRVFSMFLETLVDFIQVHKD 940
Query: 903 DLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTP 962
DLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTR+SFP D QFNILMRF VDQTQTP
Sbjct: 941 DLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFNILMRFTVDQTQTP 1000
Query: 963 NLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISL 1022
+LKVKVAILKYIE+LA+QMDP DF+NSSETRLAVSR+ITWTTEPKSSDVRKAAQ VLISL
Sbjct: 1001 SLKVKVAILKYIETLAKQMDPGDFINSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISL 1060
Query: 1023 FELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSP 1082
FELNTPEFTMLLGALPKTFQDGATKLLHNHL+N+ N + S + + R R ++ +SP
Sbjct: 1061 FELNTPEFTMLLGALPKTFQDGATKLLHNHLRNTGNGTQSSMGSPLTRPTPRSPANWSSP 1120
Query: 1083 LTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGK 1142
LTSPTN S LSPS DYDTEN+NSE+IYSSLRGVTEAI+ FSFRSQED+NEP+KRD K
Sbjct: 1121 LTSPTNTSQNTLSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSFRSQEDMNEPLKRDSK 1180
Query: 1143 K-ECDIVSRDGGAASPATEGRGGSEVEGGRTALDNKTSLLNTQPPRAFPGPRARDYNPYP 1201
K + D + G + P GG + +TALDNK SLL++ P + PR+RDYNPY
Sbjct: 1181 KDDGDSMCGGPGMSDPRA---GGDATDSSQTALDNKASLLHSMPTHS--SPRSRDYNPYN 1235
Query: 1202 YSDAINTYDKTALKEAVFDDDMEQL-RDVPIDHSDLVADLLKELSNHNERVEERKGALLE 1260
YSD+I+ ++K+ALKEA+FDDD +Q D+ +DHSDLVA+LLKELSNHNERVEERK AL E
Sbjct: 1236 YSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVAELLKELSNHNERVEERKIALYE 1295
Query: 1261 LLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAEL 1320
L+K+T+E+S VW+EHFKTILLLLLETLGDK+ +IRALAL+VLREILR+QPARFKNYAEL
Sbjct: 1296 LMKLTQEESFSVWDEHFKTILLLLLETLGDKEPTIRALALKVLREILRHQPARFKNYAEL 1355
Query: 1321 TIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQT 1380
T+MKTLEAHKD HKEVVR+AEEAAS LA+SI PEQCIKVLCPIIQTADYPINLAAIKMQT
Sbjct: 1356 TVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIKVLCPIIQTADYPINLAAIKMQT 1415
Query: 1381 KVVERIAKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLT 1440
KV+ER++KE+L LL +I+PGL+QGYDN+ESSVRKA VFCLVA+++VIG++LKPHL+QLT
Sbjct: 1416 KVIERVSKETLNLLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVIGDELKPHLSQLT 1475
Query: 1441 GSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS 1471
GSKMKLLNLYIKRAQT + + ++DVS S
Sbjct: 1476 GSKMKLLNLYIKRAQTGSGGADPTTDVSGQS 1506
>gi|93102424 hypothetical protein LOC23116 [Homo sapiens]
Length = 1720
Score = 62.0 bits (149), Expect = 4e-09
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 14 QKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVD--GLATSWVNSSNYKVVLLGM 71
Q+D R Q +EL KQ T LV L + ++ SN+KVV +
Sbjct: 362 QEDYKNRTQAVEEL------KQVLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTL 415
Query: 72 DILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDR 131
++L LV RL ++ + +G V+ + + L D K ++++ + LK+M + PQ V
Sbjct: 416 EVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKE-VGPQQVLCL 474
Query: 132 MLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSL 191
+L KHK+ R RE + I +L ++ L K+ + L D +VR AA+ +
Sbjct: 475 LLEHLKHKHSRVREEVVNICICSLLTYPSEDFDLPKLSFDLAPALVDSKRRVRQAALEAF 534
Query: 192 VEIYRHVGERVRADLSKKGLPQSRLNVIFTKFD--EVQKSGNMIQSA 236
+ +G + +++F D E+Q +G+ + +A
Sbjct: 535 AVLASSMG-------------SGKTSILFKAVDTVELQDNGDGVMNA 568
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 55.1 bits (131), Expect = 5e-07
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + S NS+S + +++S + + S + STTS ++ +T S
Sbjct: 109 ESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNS 168
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+T S S + ++ S+++ +++S ++ SS A S A+ RT +G
Sbjct: 169 ESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGA-----STATNSESRTTSNGAG 223
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANP-AGAGSRSSSPGKLLGSGYGGLTGGSS 705
+ATN S+ + G S A S S+ P +GAG+ ++S SG G T S
Sbjct: 224 TATNSESSTTSSGASTA------TNSESSTPSSGAGTATNSESSTTSSGAGTATNSES 275
Score = 52.8 bits (125), Expect = 2e-06
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAK---RSPTGSTTSRASTVS 585
ESS + S + NS+S S P S +++++ ES A S + +T+S AST +
Sbjct: 274 ESSTVSSGISTVTNSES--STPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTAT 331
Query: 586 TKSVSTT--GSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTR 643
STT G+ + S+ ++ ++ + S SS T+ +S A S S G
Sbjct: 332 NSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTAT 391
Query: 644 RQSSGSATNVASTPDNRGRSR----AKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG 699
S + ++ AST N S A + S+ S +++ A + S S GSG
Sbjct: 392 TSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGSGTAA 451
Query: 700 LTG 702
LTG
Sbjct: 452 LTG 454
Score = 51.6 bits (122), Expect = 6e-06
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + S NSDS + + +++S + + S + STTS ++ +T S
Sbjct: 124 ESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNS 183
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+T S + S + ++ S+ + +++S + S+ A S +S T +
Sbjct: 184 ESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESS-----TTSSGAS 238
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGP 708
+ATN S+ + G A + S +GAG+ ++S + SG +T S P
Sbjct: 239 TATNSESSTPSSGAGTA-----TNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTP 293
Score = 49.3 bits (116), Expect = 3e-05
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 7/210 (3%)
Query: 529 ESSYQKALQSHLKNSDS-IVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTK 587
ESS + S NS+S S S ++S S+ + N +A S + +T+S AST +
Sbjct: 184 ESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNS 243
Query: 588 SVST----TGSLQRSRSDIDVNAAASAKSKVSS--SSGTTPFSSAAALPPGSYASLGRIR 641
ST G+ S S + A +A + SS SSG + +++ + P S A+
Sbjct: 244 ESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNS 303
Query: 642 TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLT 701
+S A ++ + S A + S+ S +++ A + S S G+ +
Sbjct: 304 ESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNS 363
Query: 702 GGSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
G S+ + ++ S S + TS
Sbjct: 364 GSSTTSSGTSTATNSESSTVSSGASTATTS 393
Score = 46.6 bits (109), Expect = 2e-04
Identities = 54/253 (21%), Positives = 98/253 (38%), Gaps = 22/253 (8%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + S NS+S S P S ++++ ES S S G+ T+ S+ +
Sbjct: 229 ESSTTSSGASTATNSES--STPSSGAGTATNSES-----STTSSGAGTATNSESSTVSSG 281
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSS----------SGTTPFSSAAALPPGSYASLG 638
+ST + + S N A +++S +SS S T+ +S A S S G
Sbjct: 282 ISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSG 341
Query: 639 RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
S + ++ AST N G S + + + ++ +G+ +++ + + G
Sbjct: 342 ASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSG 401
Query: 699 GLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVL 758
T +S V+ + + S S + G G G+ +
Sbjct: 402 ASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGS-----GTAALTGMH 456
Query: 759 STSTDLEAAVADA 771
+TS AV++A
Sbjct: 457 TTSHSASTAVSEA 469
Score = 46.2 bits (108), Expect = 2e-04
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)
Query: 538 SHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTT---GS 594
S + NS+ + +++S +++ +S + STTS ++ +T S S+T G+
Sbjct: 73 SIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGA 132
Query: 595 LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVA 654
+ SD ++ ++ + S SS T+ +S A S S G S + ++ A
Sbjct: 133 STATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRA 192
Query: 655 STPDNRGRSR----AKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGP 708
ST N S A + S+ ++N GAG+ ++S SG T S P
Sbjct: 193 STATNSESSTTSSGASTATNSESRTTSN--GAGTATNSESSTTSSGASTATNSESSTP 248
Score = 45.8 bits (107), Expect = 3e-04
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
N SIV+ + +SS + N S S T+ S+ ++ ST + + S
Sbjct: 70 NGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPS 129
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRG 661
+ A ++ S +SS +T +S ++ ++ + SSG++T ++ +
Sbjct: 130 SGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGAST-ATNSESSTV 188
Query: 662 RSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
SRA + S+ S +++ A + S S G+G + S+ + ++ S P
Sbjct: 189 SSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTP 248
Query: 722 RS 723
S
Sbjct: 249 SS 250
Score = 43.1 bits (100), Expect = 0.002
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 9/210 (4%)
Query: 527 TLESSYQKALQSHLKNSDSIVSLPQSDRSS--SSSQESLNRPLSAKRSPTGSTTSRASTV 584
T S A S + S S + SS SS + S+ S ST + + +
Sbjct: 142 TTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESS 201
Query: 585 STKSVSTTGSLQRSRSDID-VNAAASAKSKVSSSSGTTPFSSAAALPP--GSYASLGRIR 641
+T S ++T + SR+ + A +++S +SS +T +S ++ P A+
Sbjct: 202 TTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESS 261
Query: 642 TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLT 701
T +G+ATN S+ + G S S S AN A S SS+ + +
Sbjct: 262 TTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTA-TNSESSTTSSGANTATNSDS 320
Query: 702 GGSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
+S G +SE + S G S T+
Sbjct: 321 STTSSGASTATNSESST---TSSGASTATN 347
>gi|57222563 colonic and hepatic tumor over-expressed protein
isoform b [Homo sapiens]
Length = 1972
Score = 54.3 bits (129), Expect = 9e-07
Identities = 99/541 (18%), Positives = 197/541 (36%), Gaps = 58/541 (10%)
Query: 53 GLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQ 112
GL +V SN V L G++ V K G V+ ++ ++ + + ++
Sbjct: 51 GLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTT-GEVVSGVVSKVFNQPKAKAKELG 109
Query: 113 TLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHI 172
+ + + + V + +L G +KN + L L+ G++ + L I+ +
Sbjct: 110 IEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVL 169
Query: 173 CNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNM 232
L VRD A VEIYR + + +R L
Sbjct: 170 PKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQN------------------------ 205
Query: 233 IQSANDKNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKE 292
I S K ++E K P S+ R +++ + L + SA +
Sbjct: 206 INSVQLKELEEE--------------WVKLPTSAPRPTRFLRSQQELEAKLEQQQSAGGD 251
Query: 293 GAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSD--DKHDWEQRVNALKKIRS 350
G D+ D +VP + Y + E ++K+ + D + W++R AL+ +
Sbjct: 252 AEGGGDDGD------EVPQIDAYELLEAVEILSKLPKDFYDKIEAKKWQERKEALESVEV 305
Query: 351 LLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAI 410
L+ E ++ ++ L K+ KD +V A L L+ L KF A +
Sbjct: 306 LIKNPKLEAGDYADLVKALK---KVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHV 362
Query: 411 MPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDL 470
+PTI + + A+ I T + + + + +K+ ++++ F+
Sbjct: 363 VPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIAR 422
Query: 471 LLQEWQTHSLERH-ISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLE 529
+ +L + + + K I+D+ E R A + + E +
Sbjct: 423 SFRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAA---FEALGTALKVVGEKAVNPFL 479
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
+ K +K V L ++ ++ + +PL + + +G+ A TK +
Sbjct: 480 ADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFKPLPGRTAASGA----AGDKDTKDI 535
Query: 590 S 590
S
Sbjct: 536 S 536
Score = 50.4 bits (119), Expect = 1e-05
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 20 RLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATS-------------WVN----SS 62
+ Q+ + + D+ +D +H L +VD L + W+ +
Sbjct: 1197 KTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDT 1256
Query: 63 NYKVVLLGMDILSALVTRLQDR----FKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
N V++ ++ L L T L + + + + +P L+ ++G+ KD +R+ D +L
Sbjct: 1257 NTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRK-DVRAILNR 1315
Query: 119 MDQAANPQYVWDRMLGGFKHKNFRTREGICL----CLIATLNASGAQTLTLSKIVPHICN 174
M ++ ++ G K KN + R CL CL+ + + Q T K + I
Sbjct: 1316 MCLVYPASKMFPFIMEGTKSKNSKQRAE-CLEELGCLVESYGMNVCQP-TPGKALKEIAV 1373
Query: 175 LLGDPNSQVRDAAINSLVEIYRHVGERV 202
+GD ++ VR+AA+N++V +Y G++V
Sbjct: 1374 HIGDRDNAVRNAALNTIVTVYNVHGDQV 1401
Score = 43.1 bits (100), Expect = 0.002
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%)
Query: 62 SNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQ 121
+N++V+ + + I+ AL+ + + K VL L+D++GD K ++ + I +
Sbjct: 653 TNFQVMQMKLHIV-ALIAQKGNFSKTSAQVVLDGLVDKIGDVKCGNNAKEA--MTAIAEA 709
Query: 122 AANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNS 181
P + F KN + + L + G L + + ++ L N
Sbjct: 710 CMLPWTAEQVVSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNP 769
Query: 182 QVRDAAINSLVEIYRHVGERVRADL-SKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
VR AAI L +Y +VG +R +K S+++ F K +
Sbjct: 770 AVRTAAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGISKHST 829
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSR--RNVGMGTTRRLGSSTLGSKSSAAKEGAGAVD 298
++ DG+ P S+ P + + ++G + E AG ++
Sbjct: 830 SGTDEGEDGDEPDDGSNDVVDLLPRTEISDKITSELVSKIGDKNWKIRKEGLDEVAGIIN 889
Query: 299 EEDFIK 304
+ FI+
Sbjct: 890 DAKFIQ 895
Score = 42.7 bits (99), Expect = 0.003
Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 34/284 (11%)
Query: 50 LVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVRE 109
LV L +N +V L L+ L L+ +F G V+P+++++ + K V +
Sbjct: 320 LVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVVPTILEKFKEKKPQVVQ 379
Query: 110 QDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIV 169
Q + I Q + + +L +KN ++ L + + A TL S +
Sbjct: 380 ALQEAIDAIF-LTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFRHCTASTLPKSLLK 438
Query: 170 PHICNLL---GDPNSQVRDAAINSLVEIYRHVGERV----RADLSKKGLPQSRLNVIFTK 222
P LL D +VRDAA +L + VGE+ AD+ K L + + +
Sbjct: 439 PFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDKIKECSEKVE 498
Query: 223 FDEVQKSGNMIQSANDKNF-------------DDEDSVDGNRP-----SSASSTSSKAPP 264
+K+G +A+ K F D+D+ D + P A + + PP
Sbjct: 499 LIHGKKAG---LAADKKEFKPLPGRTAASGAAGDKDTKDISAPKPGPLKKAPAAKAGGPP 555
Query: 265 SSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDD 308
+ G G+ G+K+ E V+ E I+ ++
Sbjct: 556 KKGKPAAPG-----GAGNTGTKNKKGLETKEIVEPELSIEVCEE 594
Score = 42.0 bits (97), Expect = 0.004
Identities = 105/566 (18%), Positives = 196/566 (34%), Gaps = 39/566 (6%)
Query: 59 VNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
+N SN +V ++IL L + K + + +I LGD+K++VR +
Sbjct: 909 LNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAW 968
Query: 119 MDQAANPQYVWDRMLGG-FKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLG 177
+Q +++ L K +N R+ + L L + L VPH+ + L
Sbjct: 969 AEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLE 1028
Query: 178 DPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIF----------------T 221
D N VR A ++L H+G A + K P S+ V+ T
Sbjct: 1029 DRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPTSKDQVLAMLEKAKVNMPAKPAPPT 1088
Query: 222 KFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSTSSKAPP-SSRRNVGMGTTRRLGS 280
K G+ + ED + + +KAP SS+ G +++ S
Sbjct: 1089 KATSKPMGGSAPAKFQPASAPAEDCISSSTEPKPDPKKAKAPGLSSKAKSAQG--KKMPS 1146
Query: 281 STLGSKSSAAKEGAGAV----DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKH 336
T K K G + +E +K + V++ + +E I +++ +S
Sbjct: 1147 KT-SLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVA 1205
Query: 337 DWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAK-------DLRSQVVREAC 389
W Q + A A D+ + G L K D + V+ +A
Sbjct: 1206 KWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKAL 1265
Query: 390 ITLGHLSSVLGNKFDH----GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRL 445
L L ++L + H A + +P + + ++ + + ++
Sbjct: 1266 EYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRKDVRAILNRMCLVYPASKM 1325
Query: 446 IPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIE 505
P I SK+ R C E L L++ + + + + I I D D+ R
Sbjct: 1326 FPFIMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAVHIGDRDNAVRNA 1385
Query: 506 ARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNS---DSIVSLPQSDRSSSSSQES 562
A ++ + L L L+ +K S S + Q + +Q
Sbjct: 1386 ALNTIVTVYNVHGDQVFKLIGNLSEKDMSMLEERIKRSAKRPSAAPIKQVEEKPQRAQNI 1445
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKS 588
+ ++ P +S+ + + S
Sbjct: 1446 SSNANMLRKGPAEDMSSKLNQARSMS 1471
Score = 33.5 bits (75), Expect = 1.6
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 21/246 (8%)
Query: 1204 DAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLK 1263
D + D L EAV E L +P D D + ++ +ERK AL +
Sbjct: 260 DEVPQIDAYELLEAV-----EILSKLPKDFYDKI---------EAKKWQERKEALESVEV 305
Query: 1264 ITREDSLGVWEEHFKTILLLLLETLG-DKDHSIRALALRVLREILRNQPARFKNYAELTI 1322
+ + L + + ++ L + +G D + + ALA + L + +F YA +
Sbjct: 306 LIKNPKLEAGD--YADLVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVV 363
Query: 1323 MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKV 1382
LE K+ +VV+A +EA + + + + + ++ + I +
Sbjct: 364 PTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARS 423
Query: 1383 VERIAKESL-LQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGED-LKPHLAQLT 1440
+L LL LL+ +++ VR A+ L V+GE + P LA +
Sbjct: 424 FRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADV- 482
Query: 1441 GSKMKL 1446
K+KL
Sbjct: 483 -DKLKL 487
>gi|57164942 colonic and hepatic tumor over-expressed protein
isoform a [Homo sapiens]
Length = 2032
Score = 54.3 bits (129), Expect = 9e-07
Identities = 99/541 (18%), Positives = 197/541 (36%), Gaps = 58/541 (10%)
Query: 53 GLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQ 112
GL +V SN V L G++ V K G V+ ++ ++ + + ++
Sbjct: 51 GLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTT-GEVVSGVVSKVFNQPKAKAKELG 109
Query: 113 TLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHI 172
+ + + + V + +L G +KN + L L+ G++ + L I+ +
Sbjct: 110 IEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVL 169
Query: 173 CNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNM 232
L VRD A VEIYR + + +R L
Sbjct: 170 PKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQN------------------------ 205
Query: 233 IQSANDKNFDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKE 292
I S K ++E K P S+ R +++ + L + SA +
Sbjct: 206 INSVQLKELEEE--------------WVKLPTSAPRPTRFLRSQQELEAKLEQQQSAGGD 251
Query: 293 GAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSD--DKHDWEQRVNALKKIRS 350
G D+ D +VP + Y + E ++K+ + D + W++R AL+ +
Sbjct: 252 AEGGGDDGD------EVPQIDAYELLEAVEILSKLPKDFYDKIEAKKWQERKEALESVEV 305
Query: 351 LLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAI 410
L+ E ++ ++ L K+ KD +V A L L+ L KF A +
Sbjct: 306 LIKNPKLEAGDYADLVKALK---KVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHV 362
Query: 411 MPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDL 470
+PTI + + A+ I T + + + + +K+ ++++ F+
Sbjct: 363 VPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIAR 422
Query: 471 LLQEWQTHSLERH-ISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLE 529
+ +L + + + K I+D+ E R A + + E +
Sbjct: 423 SFRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAA---FEALGTALKVVGEKAVNPFL 479
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
+ K +K V L ++ ++ + +PL + + +G+ A TK +
Sbjct: 480 ADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFKPLPGRTAASGA----AGDKDTKDI 535
Query: 590 S 590
S
Sbjct: 536 S 536
Score = 50.4 bits (119), Expect = 1e-05
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 20 RLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATS-------------WVN----SS 62
+ Q+ + + D+ +D +H L +VD L + W+ +
Sbjct: 1197 KTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDT 1256
Query: 63 NYKVVLLGMDILSALVTRLQDR----FKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
N V++ ++ L L T L + + + + +P L+ ++G+ KD +R+ D +L
Sbjct: 1257 NTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRK-DVRAILNR 1315
Query: 119 MDQAANPQYVWDRMLGGFKHKNFRTREGICL----CLIATLNASGAQTLTLSKIVPHICN 174
M ++ ++ G K KN + R CL CL+ + + Q T K + I
Sbjct: 1316 MCLVYPASKMFPFIMEGTKSKNSKQRAE-CLEELGCLVESYGMNVCQP-TPGKALKEIAV 1373
Query: 175 LLGDPNSQVRDAAINSLVEIYRHVGERV 202
+GD ++ VR+AA+N++V +Y G++V
Sbjct: 1374 HIGDRDNAVRNAALNTIVTVYNVHGDQV 1401
Score = 43.1 bits (100), Expect = 0.002
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%)
Query: 62 SNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQ 121
+N++V+ + + I+ AL+ + + K VL L+D++GD K ++ + I +
Sbjct: 653 TNFQVMQMKLHIV-ALIAQKGNFSKTSAQVVLDGLVDKIGDVKCGNNAKEA--MTAIAEA 709
Query: 122 AANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNS 181
P + F KN + + L + G L + + ++ L N
Sbjct: 710 CMLPWTAEQVVSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNP 769
Query: 182 QVRDAAINSLVEIYRHVGERVRADL-SKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN 240
VR AAI L +Y +VG +R +K S+++ F K +
Sbjct: 770 AVRTAAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGISKHST 829
Query: 241 FDDEDSVDGNRPSSASSTSSKAPPSSR--RNVGMGTTRRLGSSTLGSKSSAAKEGAGAVD 298
++ DG+ P S+ P + + ++G + E AG ++
Sbjct: 830 SGTDEGEDGDEPDDGSNDVVDLLPRTEISDKITSELVSKIGDKNWKIRKEGLDEVAGIIN 889
Query: 299 EEDFIK 304
+ FI+
Sbjct: 890 DAKFIQ 895
Score = 42.7 bits (99), Expect = 0.003
Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 34/284 (11%)
Query: 50 LVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVRE 109
LV L +N +V L L+ L L+ +F G V+P+++++ + K V +
Sbjct: 320 LVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVVPTILEKFKEKKPQVVQ 379
Query: 110 QDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIV 169
Q + I Q + + +L +KN ++ L + + A TL S +
Sbjct: 380 ALQEAIDAIF-LTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFRHCTASTLPKSLLK 438
Query: 170 PHICNLL---GDPNSQVRDAAINSLVEIYRHVGERV----RADLSKKGLPQSRLNVIFTK 222
P LL D +VRDAA +L + VGE+ AD+ K L + + +
Sbjct: 439 PFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDKIKECSEKVE 498
Query: 223 FDEVQKSGNMIQSANDKNF-------------DDEDSVDGNRP-----SSASSTSSKAPP 264
+K+G +A+ K F D+D+ D + P A + + PP
Sbjct: 499 LIHGKKAG---LAADKKEFKPLPGRTAASGAAGDKDTKDISAPKPGPLKKAPAAKAGGPP 555
Query: 265 SSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEEDFIKAFDD 308
+ G G+ G+K+ E V+ E I+ ++
Sbjct: 556 KKGKPAAPG-----GAGNTGTKNKKGLETKEIVEPELSIEVCEE 594
Score = 42.0 bits (97), Expect = 0.004
Identities = 105/566 (18%), Positives = 196/566 (34%), Gaps = 39/566 (6%)
Query: 59 VNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKI 118
+N SN +V ++IL L + K + + +I LGD+K++VR +
Sbjct: 909 LNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAW 968
Query: 119 MDQAANPQYVWDRMLGG-FKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLG 177
+Q +++ L K +N R+ + L L + L VPH+ + L
Sbjct: 969 AEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLE 1028
Query: 178 DPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIF----------------T 221
D N VR A ++L H+G A + K P S+ V+ T
Sbjct: 1029 DRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPTSKDQVLAMLEKAKVNMPAKPAPPT 1088
Query: 222 KFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSTSSKAPP-SSRRNVGMGTTRRLGS 280
K G+ + ED + + +KAP SS+ G +++ S
Sbjct: 1089 KATSKPMGGSAPAKFQPASAPAEDCISSSTEPKPDPKKAKAPGLSSKAKSAQG--KKMPS 1146
Query: 281 STLGSKSSAAKEGAGAV----DEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKH 336
T K K G + +E +K + V++ + +E I +++ +S
Sbjct: 1147 KT-SLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVA 1205
Query: 337 DWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAK-------DLRSQVVREAC 389
W Q + A A D+ + G L K D + V+ +A
Sbjct: 1206 KWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKAL 1265
Query: 390 ITLGHLSSVLGNKFDH----GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRL 445
L L ++L + H A + +P + + ++ + + ++
Sbjct: 1266 EYLKLLFTLLSEEEYHLTENEASSFIPYLVVKVGEPKDVIRKDVRAILNRMCLVYPASKM 1325
Query: 446 IPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIE 505
P I SK+ R C E L L++ + + + + I I D D+ R
Sbjct: 1326 FPFIMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAVHIGDRDNAVRNA 1385
Query: 506 ARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNS---DSIVSLPQSDRSSSSSQES 562
A ++ + L L L+ +K S S + Q + +Q
Sbjct: 1386 ALNTIVTVYNVHGDQVFKLIGNLSEKDMSMLEERIKRSAKRPSAAPIKQVEEKPQRAQNI 1445
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKS 588
+ ++ P +S+ + + S
Sbjct: 1446 SSNANMLRKGPAEDMSSKLNQARSMS 1471
Score = 33.5 bits (75), Expect = 1.6
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 21/246 (8%)
Query: 1204 DAINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLK 1263
D + D L EAV E L +P D D + ++ +ERK AL +
Sbjct: 260 DEVPQIDAYELLEAV-----EILSKLPKDFYDKI---------EAKKWQERKEALESVEV 305
Query: 1264 ITREDSLGVWEEHFKTILLLLLETLG-DKDHSIRALALRVLREILRNQPARFKNYAELTI 1322
+ + L + + ++ L + +G D + + ALA + L + +F YA +
Sbjct: 306 LIKNPKLEAGD--YADLVKALKKVVGKDTNVMLVALAAKCLTGLAVGLRKKFGQYAGHVV 363
Query: 1323 MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKV 1382
LE K+ +VV+A +EA + + + + + ++ + I +
Sbjct: 364 PTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARS 423
Query: 1383 VERIAKESL-LQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGED-LKPHLAQLT 1440
+L LL LL+ +++ VR A+ L V+GE + P LA +
Sbjct: 424 FRHCTASTLPKSLLKPFCAALLKHINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADV- 482
Query: 1441 GSKMKL 1446
K+KL
Sbjct: 483 -DKLKL 487
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 51.6 bits (122), Expect = 6e-06
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 537 QSHLKNSDSIVSLPQSDRSSS---SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTG 593
+S +S +LPQ+ R S SS E N+ L+ +R +GS +S V K+V+ T
Sbjct: 1477 RSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESS----VDQKTVARTP 1532
Query: 594 SLQRSRS----DIDVNAAASAKSKVSSSSGTTPFSSAAALPP-------GS---YASLGR 639
QRSRS ++DV +AS + + S S ++P S A P GS S R
Sbjct: 1533 LGQRSRSGSSQELDVKPSASPQER--SESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR 1590
Query: 640 IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSAN-----PAGAGSRSSSPGKLLG 694
+ RR SGS+ V P R RA+ S S A P + S SSS G+
Sbjct: 1591 LSPRRSRSGSSPEVKDKP--RAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPS 1648
Query: 695 SGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNR 734
T S PP + ++ + S+ T P R
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688
Score = 49.7 bits (117), Expect = 2e-05
Identities = 61/230 (26%), Positives = 89/230 (38%), Gaps = 36/230 (15%)
Query: 538 SHLKNSDSIVSLPQSD---RSSSSSQESLNRPLSAKRSPT----GSTTSRASTVSTKSVS 590
SH + S S S +S + S + +R + RSP G + SR T S S
Sbjct: 449 SHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRS 508
Query: 591 TTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSA 650
+ +RSRS A +S+ G S + P S + + R R +S+
Sbjct: 509 RSPQWRRSRS-----AQRWGRSRSPQRRGR---SRSPQRPGWSRSRNTQRRGRSRSARRG 560
Query: 651 TNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRG--- 707
+ + +P RGRSR++ ++ RSRS PA SRS +P + G SR
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620
Query: 708 ------------------PPVTPSSEKRSKIPRSQGCSRETSPNRIGLDR 739
P S RS+ P +G SR +P R G R
Sbjct: 621 ARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSR 670
Score = 48.5 bits (114), Expect = 5e-05
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 562 SLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT 621
S R S RSP SR+ T + + S + + R RS ++S+ + G +
Sbjct: 556 SARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS 615
Query: 622 PFSSAAALPPGSYASLGR-IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA 680
+ A + + + R R+R + S + + TP RGRSR++ ++ RSRS PA
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Query: 681 --GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNR 734
SRS +P + S G SR + S+ P+ +G S +S +
Sbjct: 676 RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERK 731
Score = 47.4 bits (111), Expect = 1e-04
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS------TKSVSTTGSLQRSRSDID 603
P RSS SS E + ++RS + S++ + + + SVS+ ++SRS
Sbjct: 1685 PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRR 1744
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIR------TRRQSSGSATNVASTP 657
+A+S ++K +S G +P + P G S R R TRR+ ++ S
Sbjct: 1745 RRSASSPRTKTTSRRGRSP----SPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRR 1800
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG-LTGGSSRGPPVTPSSEK 716
R RSR++V + + G+G S SP + S G SR P P+S K
Sbjct: 1801 RQRSRSRSRVTRRRR-------GGSGYHSRSPARQESSRTSSRRRRGRSRTP---PTSRK 1850
Query: 717 RSK 719
RS+
Sbjct: 1851 RSR 1853
Score = 44.7 bits (104), Expect = 7e-04
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSK 613
RSSSSS S + S++S +S+ S+ S S + S S + V + K +
Sbjct: 2531 RSSSSSSSS-----------SSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK-R 2578
Query: 614 VSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR 673
V S + + PP + R RR SS S+++ +S+ + S + S S
Sbjct: 2579 VPSPTPAPKEAVREGRPPEPTPAK---RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635
Query: 674 SRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR 722
S S++ + + S S SP K G L +S P P E+RS+ PR
Sbjct: 2636 SSSSSSSSSSSSSPSPAK---PGPQALPKPAS--PKKPPPGERRSRSPR 2679
Score = 43.5 bits (101), Expect = 0.002
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
+SS +K H S+S +S + S ++S ++ RS T + SR + ST +
Sbjct: 211 KSSKKK---KHRSESESKKRKHRSP-TPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSA 266
Query: 589 VSTTGS-LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQ 645
S + S RSRS +A+AK+ ++ +G +P ++ G ++ G T+R
Sbjct: 267 DSASSSDTSRSRS-----RSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Query: 646 SS-GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
SS +AT S+P K S ++ S S + G +P LL + GGS
Sbjct: 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERH----GGS 377
Query: 705 SRGPPVTPSSEKRSKIPRSQGCSRETSP 732
+ TP S++ P +R+ SP
Sbjct: 378 PQPLATTPLSQEPVNPPSEASPTRDRSP 405
Score = 43.5 bits (101), Expect = 0.002
Identities = 71/280 (25%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
DS L S SS E ++P +A R+ +GS +S K+ + +RSRS
Sbjct: 1586 DSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSP----EPKAPAPRALPRRSRS--- 1638
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRS 663
+S+K + S G++ S+ PP S + R +SS + TP R S
Sbjct: 1639 ---GSSSKGRGPSPEGSSSTESSPEHPPKSRTA----RRGSRSSPEPKTKSRTPPRRRSS 1691
Query: 664 RA-----KVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRS 718
R+ + S+RSRSA+ + +RS +P + S S P + S
Sbjct: 1692 RSSPELTRKARLSRRSRSAS-SSPETRSRTPPRHRRS--------PSVSSPEPAEKSRSS 1742
Query: 719 KIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLE-----AAVADALL 773
+ RS R + +R G R +P + S + R T T ++ + +
Sbjct: 1743 RRRRSASSPRTKTTSRRG--RSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRR 1800
Query: 774 LGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYG 813
SRS+ + RRR G +S A ++S S R G
Sbjct: 1801 RQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRG 1840
Score = 42.7 bits (99), Expect = 0.003
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 551 QSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASA 610
+S R+SS + +R R + S TS A ++S ++ + +RSRS + + +
Sbjct: 1829 ESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888
Query: 611 KSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQ 670
+S+ S S S + S + + RR S + P R RSR++ +
Sbjct: 1889 RSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRS------RTPPVTRRRSRSRTPTT 1942
Query: 671 SQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVT--PSSEKRSKIPRSQGCSR 728
+RSRS P RS SR PPVT S + S I R + SR
Sbjct: 1943 RRRSRSRTPPVTRRRS-----------------RSRTPPVTRRRSRSRTSPITRRRSRSR 1985
Query: 729 ETSP 732
TSP
Sbjct: 1986 -TSP 1988
Score = 42.0 bits (97), Expect = 0.004
Identities = 52/199 (26%), Positives = 76/199 (38%), Gaps = 44/199 (22%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTT----SRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
RS SSS+ S +RS + S+ SR S+ ++S+S+ S +SR + + + S
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSR--LSLRRSLS 780
Query: 610 AKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVAS--TPDNRGRSRAKV 667
S TP RR SGS+ A TP R RS +
Sbjct: 781 GSSPCPKQKSQTP-------------------PRRSRSGSSQPKAKSRTPPRRSRSSS-- 819
Query: 668 VSQSQRSRSANPAGAGSRSSSPGKLLGSG----YGGLTGGSSRGPPVT----------PS 713
S + +S P+ SSSP + SG G +T + VT P
Sbjct: 820 -SPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPD 878
Query: 714 SEKRSKIPRSQGCSRETSP 732
E +S+ P CS + P
Sbjct: 879 PELKSRTPSRHSCSGSSPP 897
Score = 42.0 bits (97), Expect = 0.004
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 35/217 (16%)
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAK------------------- 570
SS + S +S S S S SSSS E + P+ +
Sbjct: 2533 SSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE 2592
Query: 571 -RSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAAL 629
R P + R S+ S S++ S S S ++++S+ S SSSS ++ SS +
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Query: 630 PPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
PG A ++ G + R RS K + + SRS + + R SP
Sbjct: 2653 KPGPQALPKPASPKKPPPG---------ERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703
Query: 690 -----GKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP 721
+ S G G RG +PS ++R + P
Sbjct: 2704 QPSPRDQQSSSSERGSRRG-QRGDSRSPSHKRRRETP 2739
Score = 40.4 bits (93), Expect = 0.013
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 558 SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR-SRSDIDVNAAASAKSKVSS 616
S + R S R+P SR+ T + + T ++R SRS + ++S+ +
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPA 653
Query: 617 SSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRS 676
G S + P A GR R+R + S + + TP RGRSR++ + RSRS
Sbjct: 654 RRGR----SRSRTP----ARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRG-RSRS 704
Query: 677 ANPAGAG-SRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSK 719
+ G S S +P + G +G SS + +S++RS+
Sbjct: 705 RSLVRRGRSHSRTPQR------RGRSGSSSERKNKSRTSQRRSR 742
Score = 39.7 bits (91), Expect = 0.022
Identities = 51/187 (27%), Positives = 71/187 (37%), Gaps = 18/187 (9%)
Query: 548 SLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAA 607
S P+ +S SS+ S R LS+ RS S S +S+S + + +S +
Sbjct: 745 SSPEMKKSRISSRRS--RSLSSPRSKAKSRLSLR-----RSLSGSSPCPKQKSQTPPRRS 797
Query: 608 ASAKSKVSSSSGTTPFSS-AAALPPGSYASLGRIRTRRQSSGSATNVAS-TPDNRGRSRA 665
S S+ + S T P S +++ PP S R SS V S TP +G
Sbjct: 798 RSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQG---- 853
Query: 666 KVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQG 725
+ S +S P SSP L S S PP +S P Q
Sbjct: 854 SITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPP-----RVKSSTPPRQS 908
Query: 726 CSRETSP 732
SR +SP
Sbjct: 909 PSRSSSP 915
Score = 39.3 bits (90), Expect = 0.028
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 29/186 (15%)
Query: 553 DRSSSSSQESLNRPLSAKRSPT------GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNA 606
DRS SS S R S RS GS S +S T+ +R RS +
Sbjct: 1789 DRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTS 1848
Query: 607 AASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
++S+ S + S A+ S + +RR+S + V+ R RSR
Sbjct: 1849 RKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSR---RRSRSRTS 1905
Query: 667 VVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGC 726
V + RSR++ + SR SR PPVT RS+ P ++
Sbjct: 1906 VTRRRSRSRASPVSRRRSR-------------------SRTPPVT-RRRSRSRTPTTRRR 1945
Query: 727 SRETSP 732
SR +P
Sbjct: 1946 SRSRTP 1951
Score = 38.5 bits (88), Expect = 0.048
Identities = 50/177 (28%), Positives = 67/177 (37%), Gaps = 25/177 (14%)
Query: 550 PQSDRSSSSSQESLNRPLSAKR-SPTGSTTSRAST---VSTKSVSTTGSLQRSRSDIDVN 605
P + R S S + R S R SP SR+ T +S S T + R RS
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTP 2023
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRA 665
A +S+ S + P + + P + R RT R + G + S P R RS +
Sbjct: 2024 PAIRRRSR--SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 666 KVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR 722
S S RSRSA P + S SR PPV +S + S R
Sbjct: 2082 G--SSSDRSRSATPPATRNHS-----------------GSRTPPVALNSSRMSCFSR 2119
Score = 38.1 bits (87), Expect = 0.063
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 22/198 (11%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVS--TTGSLQRSRSDIDVNAA 607
P +RSS+ + PL A+R + +S + V+ + S R RS
Sbjct: 352 PSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSP----PK 407
Query: 608 ASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKV 667
+ K SSSS ++P S +S + GS ++S+P ++ RS +
Sbjct: 408 SPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGR- 466
Query: 668 VSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPR----- 722
++ +S S P+ RS SP G SR T RS+ P+
Sbjct: 467 -AKRDKSHSHTPSRRMGRSRSPAT--------AKRGRSRSRTPTKRGHSRSRSPQWRRSR 517
Query: 723 -SQGCSRETSPNRIGLDR 739
+Q R SP R G R
Sbjct: 518 SAQRWGRSRSPQRRGRSR 535
Score = 35.4 bits (80), Expect = 0.41
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAA 608
LP+ S SSS ++ +P + R + S V ++ SL S+S
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGP-SLSGSKSPCPQEK-- 1020
Query: 609 SAKSKVSSSSGTTPFSSA--AALPPG-SYASLGRIRTRRQSSGSATNVASTPDNRGRSRA 665
S S V S G+ + ++ PPG SY + ++ + QS S + + T R
Sbjct: 1021 SKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSH 1080
Query: 666 KVVSQSQRSRSANPAGAGSRSSSPGKLLGS 695
Q +P G SRSSSP L S
Sbjct: 1081 SESPSLQSKSQTSPKGGRSRSSSPVTELAS 1110
>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
Length = 1992
Score = 50.4 bits (119), Expect = 1e-05
Identities = 83/390 (21%), Positives = 158/390 (40%), Gaps = 52/390 (13%)
Query: 518 SREAEHLYHTLESS-----YQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRS 572
+++ + L HT S + K+ + HL + S S + +++S RS
Sbjct: 89 AKKPKALQHTESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS--GATGGSRS 146
Query: 573 PTGSTTSRASTVSTKSVSTTGSLQRS--------RSDIDVNAAASAKSKVSSSSGTTPFS 624
T + S +TG+ +RS +S A S + SS++ T+ S
Sbjct: 147 QKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSSAASTSSSS 206
Query: 625 SAAA-----LPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ------- 672
SA A +PPG+ G+ + + + S SA++ + +R + ++K S+
Sbjct: 207 SAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFDWAARF 266
Query: 673 -------RSRSANPAGAGSRSSSPGKL-LGSGYGGL---TGGSSRGPPVTPSSEKRSKIP 721
+++ + P + S +S PG L + L T S PP S +RS
Sbjct: 267 SPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQ 326
Query: 722 RSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKK 781
++ G TS GL + G + R ++ ++ EA + A +R+ +
Sbjct: 327 KTTGSCASTSRRGSGLGKRGAAEARR------QEKMADPESNQEAVNSSA-----ARTDE 375
Query: 782 KPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQT-EDVAEVLNHCASSN 840
P + GM + ++ SD S + ++ G PH ++++ + S
Sbjct: 376 AP-QGAAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG 434
Query: 841 WSERKEGLL-GLQNLLKSQRTLSRVELKRL 869
S + + LL GLQ +SQ+ + +E+ +L
Sbjct: 435 ASSKAQQLLQGLQASDESQQLQAVIEMCQL 464
>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
Length = 456
Score = 48.9 bits (115), Expect = 4e-05
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 35 PASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 92
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++P S+ AL PGS +L G+ T SS +T+ PD+
Sbjct: 93 STTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDS--T 150
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 151 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 208
Query: 720 IPRSQGCSRETSP 732
P + + SP
Sbjct: 209 APVEESTTYHRSP 221
Score = 34.3 bits (77), Expect = 0.91
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 9/158 (5%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S + L Q +S SSQ S L SP G TT+ VST S S +
Sbjct: 287 DSTTTSGLSQEPTTSHSSQGSTEATLDTTPSPPG-TTAAPVEVSTTYHSRPSSTPTTH-- 343
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVASTPDN 659
++ +S+ S++ ++P S+ PGS A L T SS + + +P +
Sbjct: 344 FSASSTTLGRSEESTTVHSSPGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPAS 403
Query: 660 RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY 697
S S + SR G+ ++ PG GY
Sbjct: 404 TTSSGVSEESTTSHSR----PGSTHTTAFPGSTTMPGY 437
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 48.9 bits (115), Expect = 4e-05
Identities = 89/365 (24%), Positives = 131/365 (35%), Gaps = 60/365 (16%)
Query: 526 HTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGST----TSRA 581
H+ SS+ +L SH +S S L R S S SP+G + R
Sbjct: 255 HSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRN 314
Query: 582 STVSTKSVSTTGSLQRSRSDIDVNAAAS--AKSKVSSSSGTTPFSSAAALPPGSYAS--- 636
+S + G + S D ++ S + K ++++ T P + P S S
Sbjct: 315 GGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQG 374
Query: 637 --------LGRIRTRRQSSGSATNVASTPDNRGRSRAKVV-----SQS-QRSRSANPAGA 682
GR R RR+ + + AS P RGR R + S+S R+RS++ +G+
Sbjct: 375 RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 683 GSRSSSPGKLLGS--GYGGL---------------------TGGSSRGPPVTPSSEKRSK 719
G + PG GS G+GG G GP SS
Sbjct: 435 GRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGP 494
Query: 720 IPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRS 779
PRS SR S +R R +P S + + LS D E S +
Sbjct: 495 HPRSWSSSRSPSKSR---SRSAEKRPHSPSRSPSPKKPLSRDKDGEGRAR------HSEA 545
Query: 780 KKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASS 839
+ RRR Y +S S + R +R IP+Y + C SS
Sbjct: 546 EATRARRRSRSYSPIRKRRRDS-PSFMEPRRITSARKRPIPYYRPSPSSSSS----CLSS 600
Query: 840 NWSER 844
++S R
Sbjct: 601 DYSTR 605
Score = 33.5 bits (75), Expect = 1.6
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 641 RTRRQSSGSATNVASTP---DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY 697
R+ R SSGS+ + + + D+R SR + + ++ + +GSRS SP GSG+
Sbjct: 251 RSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSG--GSGW 308
Query: 698 G---------------GLTGGSSRGPPVTPSS 714
G G GS+ PP PSS
Sbjct: 309 GSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSS 340
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 48.5 bits (114), Expect = 5e-05
Identities = 71/271 (26%), Positives = 102/271 (37%), Gaps = 46/271 (16%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
SH RE Y T++S +++ H K SDS + D S S + + LS RS T
Sbjct: 200 SHRKRETPKSYKTVDSPKRRSRSPHRKWSDS----SKQDDSPSGASYGQDYDLSPSRSHT 255
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY 634
S + GS R +S SA SS+ +P+S S
Sbjct: 256 SSNYDSYK-------KSPGSTSRRQSVSPPYKEPSAYQ--SSTRSPSPYSRRQR----SV 302
Query: 635 ASLGRIRTRR-QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLL 693
+ R R+ + SGS + + +P R RS + +S+ SRS P+ +S
Sbjct: 303 SPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKS------- 355
Query: 694 GSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVN 753
SR P + S SK RS SR +S + P R+P + +
Sbjct: 356 ----------RSRSPAYSRHSSSHSKKKRSSSRSRHSSIS-----------PVRLPLNSS 394
Query: 754 AMRVLSTSTDLEAAVADALLLGDSRSKKKPV 784
LS AA A A + SK PV
Sbjct: 395 LGAELSRKKKERAAAAAAAKMDGKESKGSPV 425
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 48.5 bits (114), Expect = 5e-05
Identities = 71/271 (26%), Positives = 102/271 (37%), Gaps = 46/271 (16%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
SH RE Y T++S +++ H K SDS + D S S + + LS RS T
Sbjct: 200 SHRKRETPKSYKTVDSPKRRSRSPHRKWSDS----SKQDDSPSGASYGQDYDLSPSRSHT 255
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY 634
S + GS R +S SA SS+ +P+S S
Sbjct: 256 SSNYDSYK-------KSPGSTSRRQSVSPPYKEPSAYQ--SSTRSPSPYSRRQR----SV 302
Query: 635 ASLGRIRTRR-QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLL 693
+ R R+ + SGS + + +P R RS + +S+ SRS P+ +S
Sbjct: 303 SPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKS------- 355
Query: 694 GSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVN 753
SR P + S SK RS SR +S + P R+P + +
Sbjct: 356 ----------RSRSPAYSRHSSSHSKKKRSSSRSRHSSIS-----------PVRLPLNSS 394
Query: 754 AMRVLSTSTDLEAAVADALLLGDSRSKKKPV 784
LS AA A A + SK PV
Sbjct: 395 LGAELSRKKKERAAAAAAAKMDGKESKGSPV 425
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 48.1 bits (113), Expect = 6e-05
Identities = 54/188 (28%), Positives = 76/188 (40%), Gaps = 24/188 (12%)
Query: 563 LNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTP 622
L R + +R S + + + G R +S + + AK SSSSGT P
Sbjct: 482 LRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQP 541
Query: 623 FSSAAALP------------PGSYASLG---RIRTRRQSSGSATNVASTPDNRG---RSR 664
A A P PGS+AS R R+R +S + ST RG RSR
Sbjct: 542 APPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSR 601
Query: 665 AKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQ 724
++ + +R RSA+P A S SSS + G GGS + RS+ +
Sbjct: 602 SR-EKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKK-----KKKRSRSRGEKRS 655
Query: 725 GCSRETSP 732
G E +P
Sbjct: 656 GDGSEKAP 663
Score = 36.6 bits (83), Expect = 0.18
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 15/234 (6%)
Query: 511 WGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAK 570
W H SR+ + H SS ++ +S ++ + +DR S+ S +R +
Sbjct: 550 WDSKKHRSRDRKPGSHA-SSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRR 608
Query: 571 RSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGT------TPFS 624
R + S S+ S++ +R R + K K S S G + +
Sbjct: 609 RRRSASPPPATSS------SSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKA 662
Query: 625 SAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGS 684
A A PP S G +RR+ + ++ D+ + + ++ + +S + +
Sbjct: 663 PAPAPPPSGSTSCGDRDSRRRGA-VPPSIQDLTDHDLFAIKRTITVGRLDKSDPRGPSPA 721
Query: 685 RSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLD 738
+SSP + + GL+G RG + +RS S SRE R LD
Sbjct: 722 PASSPKREVLYDSEGLSG-EERGGKSSQKDRRRSGAASSSSSSREKGSRRKALD 774
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 47.0 bits (110), Expect = 1e-04
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 20/144 (13%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTT-----SRASTVSTKSVSTTGSLQRSRSDIDVNAAA 608
RS S S+ S +R S SP+ S + SR+S+ S++S S + S +RSRS + ++
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS-SSQSRSRSSSRERSRSRGSKSRSS 259
Query: 609 SAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVV 668
S + SSS +SS+++ P + R R+R +SS S +R + R +
Sbjct: 260 SRSHRGSSSPRKRSYSSSSSSPERN-----RKRSRSRSSSSG--------DRKKRRTRSR 306
Query: 669 SQSQRSRSANPAG-AGSRSSSPGK 691
S +R RS++ + +GSRSSS K
Sbjct: 307 SPERRHRSSSGSSHSGSRSSSKKK 330
Score = 33.1 bits (74), Expect = 2.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 639 RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
R R++ +SS S ++ S+ + RSR+ RSRS + + + SRS S + G
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRS-------RSRSRSSSSSQSRSRSSSRERSRSRG 253
Query: 699 GLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNR 734
+ SSR + S KRS S R +R
Sbjct: 254 SKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 46.2 bits (108), Expect = 2e-04
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 558 SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVS-S 616
SS+ S++ S PT AS STKS + +RS + A S S +S S
Sbjct: 7 SSKPSMSLAPSGSSMPTADPKPPASLKSTKSATP------NRSLVPTKPATSRNSVMSPS 60
Query: 617 SSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR--- 673
SS +T +S P +S R+R++ + + + V++ S+A V QR
Sbjct: 61 SSKSTKSTSTKRAPSNRPSSRSRVRSKAR---TPSRVSTDTRTSKASKASDVRCHQRRGT 117
Query: 674 -SRSANPAGAGSRSS--SPGKLLGSG----YGGLTGGSSRGPPVTPSSEKRSKIPRSQGC 726
SR P GSRSS SP + G +G G +SR TP+S+++ +S G
Sbjct: 118 HSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASR--VRTPTSQQKGSRGKSYGR 175
Query: 727 SRETSPNR 734
R ++ R
Sbjct: 176 PRTSNRER 183
Score = 45.4 bits (106), Expect = 4e-04
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 541 KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
+NS S +S +S+S+ + NRP S R S+A T S S T S S
Sbjct: 53 RNSVMSPSSSKSTKSTSTKRAPSNRPSSRSR-----VRSKARTPSRVSTDTRTSKASKAS 107
Query: 601 DIDVNAAASAKSKVSSSSGTTP---FSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
D+ + + + + S G TP S ++ P ++ GRIRT G A+ V +
Sbjct: 108 DVRCH-----QRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPT 162
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEK 716
+ SR K R R++N + S+ + K GG G S VTPS+ K
Sbjct: 163 SQQKGSRGKSYG---RPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAK 218
Score = 44.7 bits (104), Expect = 7e-04
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 31/209 (14%)
Query: 558 SSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVS-S 616
SS + ++P S +P+GS+ A S+ +T S +RS + A S S +S S
Sbjct: 2 SSPKRSSKP-SMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPS 60
Query: 617 SSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQR--- 673
SS +T +S P +S R+R++ ++ + V++ S+A V QR
Sbjct: 61 SSKSTKSTSTKRAPSNRPSSRSRVRSKARTP---SRVSTDTRTSKASKASDVRCHQRRGT 117
Query: 674 -SRSANPAGAGSRSS--SPGKLLGSG----YGGLTG----------------GSSRGPPV 710
SR P GSRSS SP + G +G G G S G P
Sbjct: 118 HSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPR 177
Query: 711 TPSSEKRSKIPRSQGCSRETSPNRIGLDR 739
T + E+ PR+ P G+ R
Sbjct: 178 TSNRERSDSQPRNLSKKSYRPPGGSGIGR 206
Score = 41.6 bits (96), Expect = 0.006
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 9/179 (5%)
Query: 555 SSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKV 614
S+ S +S ++ S +RS +GS S V + S S RSR+ + + S+
Sbjct: 273 STRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQS 332
Query: 615 SSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRS 674
S S + + G + R ++ +S + + + D+RG S + S +S
Sbjct: 333 RSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQS 392
Query: 675 RSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIP-RSQGCSRETSP 732
S N SRS SP K S P RS+ P +++ CSR SP
Sbjct: 393 GSPNKQRDHSRSRSPNK--------ARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSP 443
Score = 38.9 bits (89), Expect = 0.037
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 38/235 (16%)
Query: 500 SEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSS 559
S AR RK G S R ++ H+ S ++ S + P +RS S S
Sbjct: 312 SRARSRTRK---GILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHS 368
Query: 560 QESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSG 619
+ S S +R GS++ R + ++S S SRS A ++S+
Sbjct: 369 RSS-----SKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSR------ 417
Query: 620 TTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
+P+ + R R+R +S A + + R RS K +S RSRS N
Sbjct: 418 -SPYKA-------------RDRSRSRSPNKARDCS-----RSRSPYKARDRS-RSRSPNK 457
Query: 680 AGAGSRSSSPGKLLGSGYGGLTG----GSSRGPPVTPSSEKRSKIPRSQGCSRET 730
A SRS SP K S G P +RS+ P + R++
Sbjct: 458 ARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQS 512
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 46.2 bits (108), Expect = 2e-04
Identities = 70/318 (22%), Positives = 123/318 (38%), Gaps = 10/318 (3%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
+SS K+ S SDS S +SD S S+S +S + S+ S S +S +S S S
Sbjct: 618 DSSDSKS-DSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSD-SSNSSNSSDSSDSSDSS 675
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S++ S + SD ++ +S S+ S SS ++ S+ + + S + S
Sbjct: 676 DSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSS 735
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGP 708
++N + + D+ S + S S S +++ + S SS S + SS
Sbjct: 736 DSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSS 795
Query: 709 PVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAV 768
+ SS+ + S S + D S N+ +S + +
Sbjct: 796 DSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSS---DSSNSSDSSDSSDSSDGSD 852
Query: 769 ADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTED 828
+D+ DS + S D ++S+ SS S+ S S + + D
Sbjct: 853 SDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSD-----SDSSD 907
Query: 829 VAEVLNHCASSNWSERKE 846
+ + SSN S+ E
Sbjct: 908 SSNSSDSSDSSNSSDSSE 925
Score = 40.8 bits (94), Expect = 0.010
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS + +SDS S SD S SS + ++ S S +S +S S S
Sbjct: 1083 ESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS 1142
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+ S SD ++ +S S S SS ++ S+++ S +S + S
Sbjct: 1143 DSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1202
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSS 687
+++ + + D+ S + S S S +N + S SS
Sbjct: 1203 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSS 1241
Score = 39.3 bits (90), Expect = 0.028
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 1/206 (0%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSP-TGSTTSRASTVSTK 587
ESS +SDS S + SS S S + S+ S + S+ S S+ S+
Sbjct: 887 ESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSD 946
Query: 588 SVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSS 647
S ++ S S S N++ S+ S S SS ++ S ++ S +S + S
Sbjct: 947 SSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDS 1006
Query: 648 GSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRG 707
+++ + + ++ S + S S S ++ + S SS S + SS
Sbjct: 1007 SDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDS 1066
Query: 708 PPVTPSSEKRSKIPRSQGCSRETSPN 733
+ SS+ S+ S N
Sbjct: 1067 SDSSDSSDSSDSSDSSESSDSSDSSN 1092
Score = 35.0 bits (79), Expect = 0.53
Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 19/162 (11%)
Query: 529 ESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKS 588
ESS +SDS S SD S SS+ + + S S +S +S S S
Sbjct: 1149 ESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1208
Query: 589 VSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSG 648
S+ S SD ++ +S ++ S SS ++ S ++ SS
Sbjct: 1209 DSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSS--------------NSSDSSD 1254
Query: 649 SATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPG 690
S+ + ST D+ S +S + N G+ S S S G
Sbjct: 1255 SSDSSDSTSDSNDES-----DSQSKSGNGNNNGSDSDSDSEG 1291
Score = 33.5 bits (75), Expect = 1.6
Identities = 57/289 (19%), Positives = 105/289 (36%), Gaps = 16/289 (5%)
Query: 542 NSDSIVSLPQSDRSSS---------------SSQESLNRPLSAKRSPTGSTTSRASTVST 586
+SDS S SSS S +S N S+ S + ++ + + +
Sbjct: 563 SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 622
Query: 587 KSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQS 646
KS S+ S SD +++ S S S +S ++ S+++ S +S +
Sbjct: 623 KSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSD 682
Query: 647 SGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSR 706
S ++++ + + D+ S + S S S S++ + + + +SS S + SS
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 742
Query: 707 GPPVTPSSEKRSKIPRSQGC-SRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLE 765
+ SS S S ++S + D S N+ +S +
Sbjct: 743 SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSD 802
Query: 766 AAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGS 814
++ + S S D +NS SS S+ S GS
Sbjct: 803 SSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGS 851
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 46.2 bits (108), Expect = 2e-04
Identities = 56/217 (25%), Positives = 81/217 (37%), Gaps = 23/217 (10%)
Query: 527 TLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVST 586
++ SS K+ SH +S S S +SS S S ++ S+ S GS+ S S S+
Sbjct: 1088 SVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSS 1147
Query: 587 KSVSTTGS-------LQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR 639
+S GS L S + S ++ S S + + PPG
Sbjct: 1148 QSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGG------ 1201
Query: 640 IRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG 699
S A+ + P S+AK S S + + SSS G SG G
Sbjct: 1202 ------SDKLASPMKPVPGTPPSSKAK----SPISSGSGGSHMSGTSSSSGMKSSSGLGS 1251
Query: 700 LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIG 736
S + PP + S S S G S +S N+ G
Sbjct: 1252 SGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHG 1288
Score = 43.5 bits (101), Expect = 0.002
Identities = 58/229 (25%), Positives = 88/229 (38%), Gaps = 15/229 (6%)
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY 634
G +S + S+ SVS++GS +++AS K+ SS + SS++ L Y
Sbjct: 1075 GKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSK--SEGSSSSKLSSSMY 1132
Query: 635 ASLGRIRT--RRQSSGSATNVASTPDNR-----GRSRAKVVSQSQRSRSANPAGAGSRSS 687
+S G + + SS S S+P + G S K+ Q + S NP+ + S
Sbjct: 1133 SSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNIS 1192
Query: 688 SPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSR--ETSPNRIGLDRFGLGQP 745
G L P PSS+ +S I G S TS + GLG
Sbjct: 1193 PSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSS 1252
Query: 746 G----RIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEP 790
G + P S N+ S+S + + SK K R +P
Sbjct: 1253 GSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKP 1301
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 46.2 bits (108), Expect = 2e-04
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS 612
DR SS S++ K+ SR + S K S++ S RS S AK
Sbjct: 739 DRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHS--------KAKH 790
Query: 613 KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQS- 671
+ S+ T S + + P A R +S +A V+ +P G SR + S+S
Sbjct: 791 SLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSP---GASRKRTRSRSP 847
Query: 672 ------QRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQG 725
+RSRS + A S+S SP K S+ V+P + S RS+G
Sbjct: 848 HEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRG 907
Query: 726 CSRE 729
S+E
Sbjct: 908 VSQE 911
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 45.8 bits (107), Expect = 3e-04
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 15/198 (7%)
Query: 573 PTGSTTSRASTVSTK-------SVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSS 625
PTGST + +ST +T S +TT ++ SR+ + + S+ TTP ++
Sbjct: 3759 PTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTAT 3818
Query: 626 AAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRS-RAKVVSQSQRSRSANPAGAGS 684
+ P S R + ++ +AT +TP + + V + + + +
Sbjct: 3819 SVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVAT 3878
Query: 685 RSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQ 744
SS+PG + T + G TPSS + + S T+P G
Sbjct: 3879 PSSTPGTAHTTKVPTTT---TTGFTATPSSSPGTALTPPVWISTTTTPTTRG----STVT 3931
Query: 745 PGRIPGSVNAMRVLSTST 762
P IPG+ + VL+T+T
Sbjct: 3932 PSSIPGTTHTATVLTTTT 3949
Score = 42.7 bits (99), Expect = 0.003
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 573 PTGSTTSRASTVST------KSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSA 626
PTGST + +ST +T + +TT ++ S++ + + S+ TTP +++
Sbjct: 3115 PTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATS 3174
Query: 627 AALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRS 686
P S R + ++ +AT +TP + + V + + + +A GA
Sbjct: 3175 FTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPET---VHTSTVLTTTATTTGATGSV 3231
Query: 687 SSPGKLLGSGYGG-LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQP 745
++P G+ + + ++ G TPSS + S T+P G P
Sbjct: 3232 ATPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRG----STVTP 3287
Query: 746 GRIPGSVNAMRVLSTST 762
IPG+ + VL+T+T
Sbjct: 3288 SSIPGTTHTPTVLTTTT 3304
Score = 37.7 bits (86), Expect = 0.082
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T + S T +L RS
Sbjct: 3107 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS-SPGTATALPALRS 3165
Query: 601 DIDVNAAASAKSKVSSSSG---------TTPFSSAAALPPGSYAS-------LGRIRTRR 644
A S + SSS G TTP ++ + P S L T
Sbjct: 3166 TATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTT 3225
Query: 645 QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPG--KLLGSGYGGLTG 702
++GS +STP KV++ + +A P SSSPG + L T
Sbjct: 3226 GATGSVATPSSTPGT--AHTTKVLTTTTTGFTATP------SSSPGTARTLPVWISTTTT 3277
Query: 703 GSSRGPPVTPSS 714
++RG VTPSS
Sbjct: 3278 PTTRGSTVTPSS 3289
Score = 37.4 bits (85), Expect = 0.11
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T + S T +L RS
Sbjct: 4254 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS-SPGTATALPALRS 4312
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
A S + SSS GTT + L + T + +AT +STP+
Sbjct: 4313 TATTPTATSFTAIPSSSLGTT------------WTRLSQTTTPTATMSTAT-PSSTPET- 4358
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
+ V + + + + SS+PG + T + G VTPSS +
Sbjct: 4359 --AHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTT---TTGFTVTPSSSPGTAR 4413
Query: 721 PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTST 762
S T+P G P +PG+ + VL+T+T
Sbjct: 4414 TPPVWISTTTTPTTSG----STVTPSSVPGTTHTPTVLTTTT 4451
Score = 36.6 bits (83), Expect = 0.18
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 35/228 (15%)
Query: 546 IVSLPQSDRSSSSSQESLNRPLSAKRSP--------TGSTTSRASTVSTKSVS--TTGSL 595
I++ P + ++++S S P S R+ T +T + S+ +T S S T +L
Sbjct: 2599 ILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATAL 2658
Query: 596 QRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVAS 655
RS A S SSS GTT + L + T + +AT +S
Sbjct: 2659 PALRSTATTPTATSVTPIPSSSLGTT------------WTRLSQTTTPTATMSTAT-PSS 2705
Query: 656 TPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY-GGLTGGSSRGPPVTPSS 714
TP+ S + + +A GA ++P G+ + + ++ G TPSS
Sbjct: 2706 TPETAHTS-------TVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSS 2758
Query: 715 EKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTST 762
+ + S T+P G P IPG+ + VL+T+T
Sbjct: 2759 SPGTALTPPVWISTTTTPTTRG----STVTPSSIPGTTHTATVLTTTT 2802
Score = 33.5 bits (75), Expect = 1.6
Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 574 TGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS 633
T + T+ A+T T + S+T +++ A +A + +++ +TP ++ P +
Sbjct: 4869 TTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPST 4928
Query: 634 YASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA------------- 680
A++ ++ S A TP + V+ S+ + S++P
Sbjct: 4929 TATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTAT 4988
Query: 681 --GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLD 738
A S ++ P LG+ + L+ + P T S+ S P + S +
Sbjct: 4989 TPTATSFTAIPSSSLGTTWTRLS--QTTTPTATMSTATPSSTPETVHTSTVLTATATTTG 5046
Query: 739 RFG-LGQPGRIPGSVNAMRVLSTST 762
G + P PG+ + +V +T+T
Sbjct: 5047 ATGSVATPSSTPGTAHTTKVPTTTT 5071
Score = 32.7 bits (73), Expect = 2.6
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 26/169 (15%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T S+ S T +L RS
Sbjct: 4927 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSS-SPGTATALPALRS 4985
Query: 601 DIDVNAAASAKSKVSSSSG---------TTPFSSAAALPPGSYAS-------LGRIRTRR 644
A S + SSS G TTP ++ + P S L T
Sbjct: 4986 TATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTT 5045
Query: 645 QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLL 693
++GS +STP KV + + +A P SSSPG L
Sbjct: 5046 GATGSVATPSSTPGT--AHTTKVPTTTTTGFTATP------SSSPGTAL 5086
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 45.8 bits (107), Expect = 3e-04
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 15/198 (7%)
Query: 573 PTGSTTSRASTVSTK-------SVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSS 625
PTGST + +ST +T S +TT ++ SR+ + + S+ TTP ++
Sbjct: 3179 PTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTAT 3238
Query: 626 AAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRS-RAKVVSQSQRSRSANPAGAGS 684
+ P S R + ++ +AT +TP + + V + + + +
Sbjct: 3239 SVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVAT 3298
Query: 685 RSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQ 744
SS+PG + T + G TPSS + + S T+P G
Sbjct: 3299 PSSTPGTAHTTKVPTTT---TTGFTATPSSSPGTALTPPVWISTTTTPTTRG----STVT 3351
Query: 745 PGRIPGSVNAMRVLSTST 762
P IPG+ + VL+T+T
Sbjct: 3352 PSSIPGTTHTATVLTTTT 3369
Score = 42.7 bits (99), Expect = 0.003
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 573 PTGSTTSRASTVST------KSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSA 626
PTGST + +ST +T + +TT ++ S++ + + S+ TTP +++
Sbjct: 2480 PTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATS 2539
Query: 627 AALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRS 686
P S R + ++ +AT +TP + + V + + + +A GA
Sbjct: 2540 FTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPET---VHTSTVLTTTATTTGATGSV 2596
Query: 687 SSPGKLLGSGYGG-LTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQP 745
++P G+ + + ++ G TPSS + S T+P G P
Sbjct: 2597 ATPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRG----STVTP 2652
Query: 746 GRIPGSVNAMRVLSTST 762
IPG+ + VL+T+T
Sbjct: 2653 SSIPGTTHTPTVLTTTT 2669
Score = 42.4 bits (98), Expect = 0.003
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T S+ S T +L RS
Sbjct: 4457 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSS-SPGTATALPALRS 4515
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
A S + SSS GTT + L + T + +AT +STP+
Sbjct: 4516 TATTPTATSFTAIPSSSLGTT------------WTRLSQTTTPTATMSTAT-PSSTPET- 4561
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY-GGLTGGSSRGPPVTPSSEKRSK 719
V + + + +A GA ++P G+ + + ++ G TPSS +
Sbjct: 4562 ------VHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTA 4615
Query: 720 IPRSQGCSRETSPNRIGLDRFG-LGQPGRIPGSVNAMRVLSTST 762
+ S T+P G P IPG+ + RVL+T+T
Sbjct: 4616 LTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTT 4659
Score = 37.7 bits (86), Expect = 0.082
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T + S T +L RS
Sbjct: 2472 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS-SPGTATALPALRS 2530
Query: 601 DIDVNAAASAKSKVSSSSG---------TTPFSSAAALPPGSYAS-------LGRIRTRR 644
A S + SSS G TTP ++ + P S L T
Sbjct: 2531 TATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTT 2590
Query: 645 QSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPG--KLLGSGYGGLTG 702
++GS +STP KV++ + +A P SSSPG + L T
Sbjct: 2591 GATGSVATPSSTPGT--AHTTKVLTTTTTGFTATP------SSSPGTARTLPVWISTTTT 2642
Query: 703 GSSRGPPVTPSS 714
++RG VTPSS
Sbjct: 2643 PTTRGSTVTPSS 2654
Score = 37.4 bits (85), Expect = 0.11
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Query: 542 NSDSIVSLPQ-SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS 600
++ + V++P S ++SS+Q + P + + T + TS +T + S T +L RS
Sbjct: 3729 STTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFS-SPGTATALPALRS 3787
Query: 601 DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR 660
A S + SSS GTT + L + T + +AT +STP+
Sbjct: 3788 TATTPTATSFTAIPSSSLGTT------------WTRLSQTTTPTATMSTAT-PSSTPET- 3833
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
+ V + + + + SS+PG + T + G VTPSS +
Sbjct: 3834 --AHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTT---TTGFTVTPSSSPGTAR 3888
Query: 721 PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTST 762
S T+P G P +PG+ + VL+T+T
Sbjct: 3889 TPPVWISTTTTPTTSG----STVTPSSVPGTTHTPTVLTTTT 3926
Score = 37.4 bits (85), Expect = 0.11
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 556 SSSSQESLNRP--LSAKRSPTGST-TSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS 612
SSS +L P +S +PT +T T+ STV+ S+ T R + A + +
Sbjct: 4609 SSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMA 4668
Query: 613 KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
SSS+ T+ G+ SL T ++GS TN +STP G + V S
Sbjct: 4669 TPSSSTQTS----------GTPPSLTTTATTITATGSTTNPSSTP---GTTPITPVLTST 4715
Query: 673 RSRSANPAGAGSRSSSP 689
+ A + + SSSP
Sbjct: 4716 ATTPAATSSKATSSSSP 4732
Score = 36.6 bits (83), Expect = 0.18
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 35/228 (15%)
Query: 546 IVSLPQSDRSSSSSQESLNRPLSAKRSP--------TGSTTSRASTVSTKSVS--TTGSL 595
I++ P + ++++S S P S R+ T +T + S+ +T S S T +L
Sbjct: 1909 ILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATAL 1968
Query: 596 QRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVAS 655
RS A S SSS GTT + L + T + +AT +S
Sbjct: 1969 PALRSTATTPTATSVTPIPSSSLGTT------------WTRLSQTTTPTATMSTAT-PSS 2015
Query: 656 TPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY-GGLTGGSSRGPPVTPSS 714
TP+ S + + +A GA ++P G+ + + ++ G TPSS
Sbjct: 2016 TPETAHTS-------TVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSS 2068
Query: 715 EKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTST 762
+ + S T+P G P IPG+ + VL+T+T
Sbjct: 2069 SPGTALTPPVWISTTTTPTTRG----STVTPSSIPGTTHTATVLTTTT 2112
Score = 35.0 bits (79), Expect = 0.53
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 547 VSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV----STTGSLQRSRSDI 602
++ P S +S + SL + + TGSTT+ +ST T + +TT + + S
Sbjct: 3377 MATPSSSTQTSGTPPSLTTTATTITA-TGSTTNPSSTPGTTPIPPVLTTTATTPAATSST 3435
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDN-RG 661
++A + TT + +LPP S ++ T S T + P
Sbjct: 3436 VTPSSALGTTHTPPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTS 3495
Query: 662 RSRAKVVSQSQRSRSA-NPAGAGSRSSSPGKLLGSGYGGLTGGSSR-GPPVTPSSEKRSK 719
+ A S +Q S A + SR++ G+ G T G+SR TPS + S
Sbjct: 3496 HTPAATTSTTQHSTPALSSPHPSSRTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTST 3555
Query: 720 I 720
+
Sbjct: 3556 L 3556
Score = 34.3 bits (77), Expect = 0.91
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 555 SSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKV 614
++ SS R L S T + T+R STV+ S+ T + A + +
Sbjct: 2621 ATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATP 2680
Query: 615 SSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRS 674
SSS+ T+ G+ SL T ++GS TN +STP G + V +
Sbjct: 2681 SSSTQTS----------GTPPSLTTTATTITATGSTTNPSSTP---GTTPIPPV----LT 2723
Query: 675 RSANPAGAGSRSSSPGKLLGSGYG---GLTGGSSRGPPVTPSS 714
+A A S + +P LG+ + T ++ G ++PSS
Sbjct: 2724 TTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSS 2766
Score = 33.5 bits (75), Expect = 1.6
Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 574 TGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS 633
T + T+ A+T T + S+T +++ A +A + +++ +TP ++ P +
Sbjct: 4399 TTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPST 4458
Query: 634 YASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA------------- 680
A++ ++ S A TP + V+ S+ + S++P
Sbjct: 4459 TATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTAT 4518
Query: 681 --GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLD 738
A S ++ P LG+ + L+ + P T S+ S P + S +
Sbjct: 4519 TPTATSFTAIPSSSLGTTWTRLS--QTTTPTATMSTATPSSTPETVHTSTVLTATATTTG 4576
Query: 739 RFG-LGQPGRIPGSVNAMRVLSTST 762
G + P PG+ + +V +T+T
Sbjct: 4577 ATGSVATPSSTPGTAHTTKVPTTTT 4601
Score = 32.0 bits (71), Expect = 4.5
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 556 SSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVS 615
SSS +L P+ S T + T+R STV+ S+ T + A + + S
Sbjct: 2067 SSSPGTALTPPVWI--STTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPS 2124
Query: 616 SSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
SS+ T+ G+ SL T ++GS TN +STP
Sbjct: 2125 SSTQTS----------GTPPSLTTTATTITATGSTTNPSSTP 2156
Score = 32.0 bits (71), Expect = 4.5
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 556 SSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVS 615
SSS +L P+ S T + T+R STV+ S+ T + A + + S
Sbjct: 3324 SSSPGTALTPPVWI--STTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPS 3381
Query: 616 SSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP 657
SS+ T+ G+ SL T ++GS TN +STP
Sbjct: 3382 SSTQTS----------GTPPSLTTTATTITATGSTTNPSSTP 3413
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 44.7 bits (104), Expect = 7e-04
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 982 PASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 1039
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++ S+ AL PGS +L G+ T S+ +T+ PD+
Sbjct: 1040 STTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDS--T 1097
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 1098 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 1155
Query: 720 IPRSQGCSRETSP 732
P + + SP
Sbjct: 1156 APVEESTTYHRSP 1168
Score = 42.4 bits (98), Expect = 0.003
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS+
Sbjct: 4312 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHT 4371
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 4372 TA--FPSSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 4429
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 4430 LPDNTTASGLLEASTPVHSSTGSP 4453
Score = 40.8 bits (94), Expect = 0.010
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS
Sbjct: 1672 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHT 1731
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 1732 TA--FPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 1789
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 1790 LPDNTTASGLLEASTPVHSSTGSP 1813
Score = 38.9 bits (89), Expect = 0.037
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + + S +S+ S SS T SS P
Sbjct: 1899 SPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISS----P 1954
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 1955 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 2014
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTG--GSSRGPPVTPSSEKRSKIPRS 723
G ++SP + SG T GS+ P ++ S PRS
Sbjct: 2015 SVLLGESTTSP---ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRS 2058
Score = 38.1 bits (87), Expect = 0.063
Identities = 44/151 (29%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 540 LKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSR 599
L S + L + + SS S +R LS R+ T S S ST S T ++
Sbjct: 267 LPGSTTTAGLSEKSTTFYSSPRSPDRTLSPART-TSSGVSEKSTTSHSRPGPTHTIAFPD 325
Query: 600 SDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTP 657
S S+ S++S + P S+ L PG+ +SLG T SS T P
Sbjct: 326 S-----TTMPGVSQESTASHSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLP 380
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSS 688
DN S S S + +P S SSS
Sbjct: 381 DNTTTSGLLEASTPVHSSTGSPHTTLSPSSS 411
Score = 38.1 bits (87), Expect = 0.063
Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 22/167 (13%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + D + +S S SS T SSA
Sbjct: 3456 SPARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSA---- 3511
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 3512 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 3571
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTG--GSSRGPPVTPSSEKRSKIPRS 723
G ++SP + SG T GS+ P ++ S PRS
Sbjct: 3572 SVLLGESTTSP---ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRS 3615
Score = 36.6 bits (83), Expect = 0.18
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQ 596
+S +LP S + S S++S R A SP +T+S S S+ S S GS
Sbjct: 2977 SSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH 3036
Query: 597 RSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVA 654
+ + S S+ ++S ++ S+ A L PGS +SLG+ T SS T
Sbjct: 3037 TTA--FPDSTTTSGLSQEPTASHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETT 3094
Query: 655 STPDN 659
PD+
Sbjct: 3095 LLPDD 3099
Score = 36.6 bits (83), Expect = 0.18
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQ 596
+S +LP S + S S++S R A SP +T+S S S+ S S GS
Sbjct: 4060 SSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH 4119
Query: 597 RSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS--YASLGRIRTRRQSSGSATNVA 654
+ + S S+ ++S ++ S+ A L PGS +SLG+ T SS T
Sbjct: 4120 TTA--FPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETT 4177
Query: 655 STPDN 659
PD+
Sbjct: 4178 LLPDD 4182
Score = 36.2 bits (82), Expect = 0.24
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 20/181 (11%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 3531 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 3590
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T S +T+ +
Sbjct: 3591 TA--LPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTA 3648
Query: 656 TPDNR---GRSRAKVVSQSQRS--------RSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
PD+ G SR S S S +G+ S++ GS L+ GS
Sbjct: 3649 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSSSGSTDTALSPGS 3708
Query: 705 S 705
+
Sbjct: 3709 T 3709
Score = 35.4 bits (80), Expect = 0.41
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 20/181 (11%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 891 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 950
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T +S +T+ +
Sbjct: 951 TA--LPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTA 1008
Query: 656 TPDNR---GRSRAKVVSQSQRS--------RSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
PD+ G SR S S S +G S++ GS L+ GS
Sbjct: 1009 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSPGS 1068
Query: 705 S 705
+
Sbjct: 1069 T 1069
Score = 35.0 bits (79), Expect = 0.53
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 20/181 (11%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 1974 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 2033
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T S +T+ +
Sbjct: 2034 TA--LPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTA 2091
Query: 656 TPDNR---GRSRAKVVSQSQRS--------RSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
PD+ G SR S S S +G S++ GS L+ GS
Sbjct: 2092 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGS 2151
Query: 705 S 705
+
Sbjct: 2152 T 2152
Score = 35.0 bits (79), Expect = 0.53
Identities = 63/263 (23%), Positives = 98/263 (37%), Gaps = 29/263 (11%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDS------IVSLPQSDRSSSSSQESLNRPLS 568
SH + H +S+ L H S S LP S +S SSQES S
Sbjct: 3637 SHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSS 3696
Query: 569 AKRSPT----GSTTSRA-STVSTKSVSTTGSLQRS--RSDIDVNAAASAKSKVSSSSGT- 620
+ + T GSTT+ + ST S+ GS + + A ++V SS+G+
Sbjct: 3697 SGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP 3756
Query: 621 -TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANP 679
T S A++ PG L T Q+ ++T+ +P + + + + RS + P
Sbjct: 3757 RTTLSPASSTSPG----LQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTP 3812
Query: 680 AGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDR 739
SS+ S + S TPSS + R + + SP
Sbjct: 3813 TTHFPASSTTSG--HSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISP------- 3863
Query: 740 FGLGQPGRIPGSVNAMRVLSTST 762
G + +PGS + ST
Sbjct: 3864 -GSTEITTLPGSTTTPGLSEAST 3885
Score = 34.7 bits (78), Expect = 0.70
Identities = 53/222 (23%), Positives = 85/222 (38%), Gaps = 22/222 (9%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS 585
T +++ SH +++ + LP +S ES P+S+ T + +T
Sbjct: 3542 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 3601
Query: 586 TKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT---PFSSAAALPPGSYAS--LGRI 640
STT ++ A++ S VS S T+ P S+ P S + L R
Sbjct: 3602 LSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRH 3661
Query: 641 RTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG-- 698
T SS +T+ P + S S + + S + +G+ + SPG +G
Sbjct: 3662 STTSHSSPGSTDTTLLPASTTTSG----SSQESTTSHSSSGSTDTALSPGSTTALSFGQE 3717
Query: 699 GLTGGSSRG-------PPVTPSS---EKRSKIPRSQGCSRET 730
T SS G P T SS E +++ S G R T
Sbjct: 3718 STTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTT 3759
Score = 34.7 bits (78), Expect = 0.70
Identities = 46/173 (26%), Positives = 65/173 (37%), Gaps = 22/173 (12%)
Query: 572 SPTGSTTSRASTVSTKSVSTTGSLQRSR-SDIDVNAAASAKSKVSSSSGTTPFSSAAALP 630
SP STTS ST S+ GS Q + + + +S S SS T SSA
Sbjct: 4539 SPARSTTSGLVEESTTYHSSPGSTQTMHFPESNTTSGRGEESTTSHSSTTHTISSA---- 4594
Query: 631 PGSYASLGRIRTRRQSSGSATNVASTPDN---RGRSRAKVVSQSQR---------SRSAN 678
P + ++L T SS +T PD+ GRS S S + +RS
Sbjct: 4595 PSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTT 4654
Query: 679 PAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
G ++SP G + + G TP ++S S S T+
Sbjct: 4655 SVLLGESTTSP-----ISSGSMETTALPGSTTTPGLSEKSTTFHSSPSSTPTT 4702
Score = 33.9 bits (76), Expect = 1.2
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 902 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 961
Query: 579 -------------SRASTVSTKSVSTTG-----SLQRSR------SDIDVNAAASAKSKV 614
S A+T+S S +++G + RSR + + S+
Sbjct: 962 LSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRH 1021
Query: 615 SSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
S++S ++P S+ L P S + G + T SS +T+ A +P G + A Q
Sbjct: 1022 STTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSP---GSTTALSFGQES 1078
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQG 725
+ +NP G+ + P SG SS G P T S S P QG
Sbjct: 1079 TTFHSNP-GSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQG 1132
Score = 33.9 bits (76), Expect = 1.2
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P+S +S S+ES S + P TTS ST + GS++ + +
Sbjct: 4814 PESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTFYISPGSMETTLASTAT 4873
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNRGR 662
SAKS + SS +P + L P S +S+ T S +T+ + P +
Sbjct: 4874 TPGLSAKSTILYSSSRSPDQT---LSPASMTSSSISGEPTSLYSQAESTHTTAFPASTTT 4930
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGG--LTGGSSRGPPVTPSSEKRSKI 720
S +SQ + + P G+ + SPG + S + T S G ++ S + +
Sbjct: 4931 SG---LSQESTTFHSKP-GSTETTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTTV 4986
Query: 721 PRSQGCSRETS 731
P G S E++
Sbjct: 4987 P---GLSEEST 4994
Score = 33.5 bits (75), Expect = 1.6
Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 14/165 (8%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 2734 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 2792
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 2793 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 2849
Query: 667 VVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVT 711
S+ S + SSSPG + + T S RG T
Sbjct: 2850 TPGLSEESTTV-------YSSSPGSTETTVFPRSTTTSVRGEEPT 2887
Score = 33.1 bits (74), Expect = 2.0
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 1177 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 1235
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 1236 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 1292
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 1293 TPGLSEESTTVYSSSRGSTETT 1314
Score = 33.1 bits (74), Expect = 2.0
Identities = 54/222 (24%), Positives = 85/222 (38%), Gaps = 22/222 (9%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS 585
T +++ SH +++ + LP +S ES P+S+ T + +T
Sbjct: 1985 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 2044
Query: 586 TKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT---PFSSAAALPPGSYAS--LGRI 640
STT ++ A++ S VS S T+ P S+ P S + L R
Sbjct: 2045 LSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRH 2104
Query: 641 RTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG-- 698
T SS +T+ P + S SQ + ++P G+ + SPG +G
Sbjct: 2105 STTSHSSPGSTDTTLLPASTTTSGP---SQESTTSHSSP-GSTDTALSPGSTTALSFGQE 2160
Query: 699 GLTGGSSRG-------PPVTPSS---EKRSKIPRSQGCSRET 730
T SS G P T SS E +++ S G R T
Sbjct: 2161 STTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTT 2202
Score = 33.1 bits (74), Expect = 2.0
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 2260 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 2318
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 2319 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 2375
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 2376 TPGLSEESTTVYSSSPGSTETT 2397
Score = 33.1 bits (74), Expect = 2.0
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 3817 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 3875
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 3876 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 3932
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 3933 TPGLSEESTTVYSSSPGSTETT 3954
Score = 32.7 bits (73), Expect = 2.6
Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 15/151 (9%)
Query: 548 SLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDI 602
+LP S S++S R P T+S S ST S S GS +
Sbjct: 622 ALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTTA--F 679
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNR 660
+ S+ S++S ++P + L PGS +SLG T S +T PDN
Sbjct: 680 PGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDNT 739
Query: 661 GRS----RAKVVSQSQRS--RSANPAGAGSR 685
S + V S RS + +PAG+ +R
Sbjct: 740 TASGLLEASMPVHSSTRSPHTTLSPAGSTTR 770
Score = 32.7 bits (73), Expect = 2.6
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 1371 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 1430
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 1431 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 1490
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
+ + S + G+ + SPG S G
Sbjct: 1491 DL----SQEPTTSHSSQGSTEATLSPGSTTASSLG 1521
Score = 32.7 bits (73), Expect = 2.6
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 2928 LPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 2987
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDN---R 660
+ S+ S++ T+P S A L P + S G + S +T+ + PD+
Sbjct: 2988 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 3047
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSS 688
G S+ S S + + GS ++S
Sbjct: 3048 GLSQEPTASHSSQGSTEATLSPGSTTAS 3075
Score = 32.7 bits (73), Expect = 2.6
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 4011 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 4070
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDN---R 660
+ S+ S++ T+P S A L P + S G + S +T+ + PD+
Sbjct: 4071 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 4130
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSS 688
G S+ S S + + GS ++S
Sbjct: 4131 GLSQEPTTSHSSQGSTEATLSPGSTTAS 4158
Score = 32.3 bits (72), Expect = 3.5
Identities = 50/226 (22%), Positives = 81/226 (35%), Gaps = 15/226 (6%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
+HFS + TL S + + P +S E P+S+ + T
Sbjct: 3177 THFSASST----TLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTET 3232
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTT---PFSSAAALPP 631
+ +T STT D ++ A++ S VS S T+ P S+ P
Sbjct: 3233 TALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFP 3292
Query: 632 GSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
GS G + T SS +T+ +P G + A + + + P G+ + P
Sbjct: 3293 GSTTMPGVSQESTASHSSPGSTDTTLSP---GSTTASSLGPESTTFHSGP-GSTETTLLP 3348
Query: 690 GKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPN 733
SG SS G P T S S + + + ++ PN
Sbjct: 3349 DNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPN 3394
Score = 31.6 bits (70), Expect = 5.9
Identities = 50/231 (21%), Positives = 81/231 (35%), Gaps = 25/231 (10%)
Query: 515 SHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT 574
+HFS + TL S + + P +S E P+S+ + T
Sbjct: 4260 THFSASST----TLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTET 4315
Query: 575 GSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSS----------GTTPFS 624
+ +T STT D ++ A++ S VS S TT F
Sbjct: 4316 TALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHTTAFP 4375
Query: 625 SAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGS 684
S+ +P S S T SS +T+ +P G + A + + ++P G+
Sbjct: 4376 SSTTMPGVSQES-----TASHSSPGSTDTTLSP---GSTTASSLGPESTTFHSSP-GSTE 4426
Query: 685 RSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPN 733
+ P SG SS G P T S S + + + ++ PN
Sbjct: 4427 TTLLPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPN 4477
Score = 31.6 bits (70), Expect = 5.9
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 41/280 (14%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 4625 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 4684
Query: 579 -SRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL 637
S ST S S+T + S S + +S+ S++ ++P ++A P +
Sbjct: 4685 LSEKSTTFHSSPSSTPTTHFSASSTTLG-----RSEESTTVHSSPVATATTPSPARSTTS 4739
Query: 638 GRIR--TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGS 695
G + T SS +T P++ S +S+ SR+++ + + SS P
Sbjct: 4740 GLVEESTAYHSSPGSTQTMHFPESSTAS-----GRSEESRTSHSSTTHTISSPPSTTSAL 4794
Query: 696 GYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGL-------GQPGRI 748
+ SS G T + S + G S E++ + D G+ GRI
Sbjct: 4795 VEEPTSYHSSPGSIATTHFPESS---TTSGRSEESTASHSSPDTNGITPLPAHFTTSGRI 4851
Query: 749 ---------PGSVNAMRVLSTSTDLEAAVADALLLGDSRS 779
PGS+ + ST+T + +L SRS
Sbjct: 4852 AESTTFYISPGSMET-TLASTATTPGLSAKSTILYSSSRS 4890
Score = 31.2 bits (69), Expect = 7.7
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 16/173 (9%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 2454 LPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 2513
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNR--- 660
+ S+ S++ T+P S A L P + S G + S +T+ + PD+
Sbjct: 2514 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTP 2573
Query: 661 GRSRAKVVSQSQRS--------RSANPAGAGSRSSSPGKLLGSGYGGLTGGSS 705
G SR S S S +G S++ GS L+ GS+
Sbjct: 2574 GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGST 2626
Score = 31.2 bits (69), Expect = 7.7
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 35/206 (16%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLS------AKRSPTGSTTSRASTVSTKSVSTTGSLQ 596
+ +V R S SS E+ P S +++S T T+ R+ + +TT S
Sbjct: 2488 TSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSS-- 2545
Query: 597 RSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVAST 656
V+ +S S+ TT F + P L R T SS +T+
Sbjct: 2546 ------GVSEESSTSHSQPGSTHTTAFPDSTTTP-----GLSRHSTTSHSSPGSTDTTLL 2594
Query: 657 PDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG--GLTGGSSRG------- 707
P + S SQ + ++P G+ + SPG +G T SS G
Sbjct: 2595 PASTTTSGP---SQESTTSHSSP-GSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLF 2650
Query: 708 PPVTPSS---EKRSKIPRSQGCSRET 730
P T SS E +++ S G R T
Sbjct: 2651 PDSTTSSGIVEASTRVHSSTGSPRTT 2676
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 44.7 bits (104), Expect = 7e-04
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 550 PQSDRSSSSSQESL---NRPLSAKRS--PTGSTTSRASTVSTKSVSTTGSLQRSRSDIDV 604
P S SS S+ES +RP S + P +TT S ST S S+ GS + +
Sbjct: 469 PASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTL--LPA 526
Query: 605 NAAASAKSKVSSSSGTTPFSSAAALPPGSYASL--GRIRTRRQSSGSATNVASTPDNRGR 662
+ S S+ S++S ++ S+ AL PGS +L G+ T S+ +T+ PD+
Sbjct: 527 STTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDS--T 584
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPP---VTPSSEKRSK 719
+ + +V S R S+ G+ + SP G G + P TPS +
Sbjct: 585 TSSGIVEASTRVHSS--TGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTAT 642
Query: 720 IPRSQGCSRETSP 732
P + + SP
Sbjct: 643 APVEESTTYHRSP 655
Score = 40.8 bits (94), Expect = 0.010
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 9/144 (6%)
Query: 543 SDSIVSLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQR 597
S +LP S ++ S++S R SP +T+S S ST S S GS
Sbjct: 1159 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHT 1218
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVAS 655
+ + S+ S++S ++P S+ L PGS +SLG T SS +T
Sbjct: 1219 TA--FPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTL 1276
Query: 656 TPDNRGRSRAKVVSQSQRSRSANP 679
PDN S S S + +P
Sbjct: 1277 LPDNTTASGLLEASTPVHSSTGSP 1300
Score = 35.4 bits (80), Expect = 0.41
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 20/181 (11%)
Query: 543 SDSIVSLPQSDRSSSSSQESLNRPLSAKRS-----PTGSTTSRASTVSTKSVSTTGSLQR 597
S + P S +S S+ES S + P STTS ST S ++GS++
Sbjct: 378 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 437
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVAS 655
+ + + S+ S++ ++P S A L P S S G T +S +T+ +
Sbjct: 438 TA--LPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTA 495
Query: 656 TPDNR---GRSRAKVVSQSQRS--------RSANPAGAGSRSSSPGKLLGSGYGGLTGGS 704
PD+ G SR S S S +G S++ GS L+ GS
Sbjct: 496 FPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSPGS 555
Query: 705 S 705
+
Sbjct: 556 T 556
Score = 33.9 bits (76), Expect = 1.2
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 527 TLESSYQKALQSHL-KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPT----GSTT--- 578
T +++ SH +++ + LP +S ES P+S+ T GSTT
Sbjct: 389 TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPG 448
Query: 579 -------------SRASTVSTKSVSTTG-----SLQRSR------SDIDVNAAASAKSKV 614
S A+T+S S +++G + RSR + + S+
Sbjct: 449 LSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRH 508
Query: 615 SSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
S++S ++P S+ L P S + G + T SS +T+ A +P G + A Q
Sbjct: 509 STTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSP---GSTTALSFGQES 565
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGY--GGLTGGSSRGPPVTPSSEKRSKIPRSQG 725
+ +NP G+ + P SG SS G P T S S P QG
Sbjct: 566 TTFHSNP-GSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQG 619
Score = 33.1 bits (74), Expect = 2.0
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P S +S S++S S S T + +S ST S + STT + ++I ++
Sbjct: 664 PASSTTSGHSEKSTIFHSSPDASGT-TPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 722
Query: 610 AKSKVSSSSGT---TPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAK 666
+S +S T +P S L P S SLG +S+ S + ST +
Sbjct: 723 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLG---VGEESTTSRSQPGSTHSTVSPASTT 779
Query: 667 VVSQSQRSRSANPAGAGSRSSS 688
S+ S + + GS ++
Sbjct: 780 TPGLSEESTTVYSSSRGSTETT 801
Score = 32.7 bits (73), Expect = 2.6
Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 15/151 (9%)
Query: 548 SLPQSDRSSSSSQESLN-----RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDI 602
+LP S S++S R P T+S S ST S S GS +
Sbjct: 109 ALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTTA--F 166
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSY--ASLGRIRTRRQSSGSATNVASTPDNR 660
+ S+ S++S ++P + L PGS +SLG T S +T PDN
Sbjct: 167 PGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDNT 226
Query: 661 GRS----RAKVVSQSQRS--RSANPAGAGSR 685
S + V S RS + +PAG+ +R
Sbjct: 227 TASGLLEASMPVHSSTRSPHTTLSPAGSTTR 257
Score = 32.7 bits (73), Expect = 2.6
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Query: 549 LPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD---IDVN 605
LP + ++ +ES P S+ + T + +R++T ST L S ++ + +
Sbjct: 858 LPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGS 917
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLG--RIRTRRQSSGSATNVASTPDNRGRS 663
+ S+ S++ T+P S A L P + S G + S +T+ + PD+ S
Sbjct: 918 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTS 977
Query: 664 RAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
+ + S + G+ + SPG S G
Sbjct: 978 DL----SQEPTTSHSSQGSTEATLSPGSTTASSLG 1008
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 44.7 bits (104), Expect = 7e-04
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 33/261 (12%)
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
SS L + +S+++V+ SS + E + P S + GST +ST V
Sbjct: 3413 SSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTST--TSEGSTPLSIMPLSTTPV 3470
Query: 590 STTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR-------IRT 642
+++ + S + +D + + S +SS T +S P S A G + T
Sbjct: 3471 ASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSM----PTSTAGEGSTPLTNMPVST 3526
Query: 643 RRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRS-ANPAGAGSRSSSPGK--------LL 693
+S A+ +++TP + S V S SQ S S A R S+P + LL
Sbjct: 3527 TPVASSEASTLSTTPVD---SNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLL 3583
Query: 694 GSGYGGLTGGSSRGPPVTPSSEKRSKIPRS-QGCSRETSPNRIGLDRFGLGQPGRIPGSV 752
S Y S P TPS ++ + + S Q S T P I L + P + +
Sbjct: 3584 SSTY---VTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLP---MSTPSEVSTPL 3637
Query: 753 NAMRVLSTSTDL-EAAVADAL 772
M V +TS + EA A L
Sbjct: 3638 TIMPVSTTSVTISEAGTASTL 3658
Score = 42.7 bits (99), Expect = 0.003
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
DS + S +SSS + + GST + +VST V+++ + S + +D
Sbjct: 478 DSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVD 537
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG----RIRTRRQSSGSATNVASTPDN 659
+ + S+ SSSS TTP ++ S S + TR S A+ ++TP +
Sbjct: 538 TSTPVTTSSEASSSS-TTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPAD 596
Query: 660 RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSK 719
S V + S+ S S+ A S +S S RG +T S +
Sbjct: 597 ---SNTFVTTSSEASSSSTTAEGTSMPTST-------------YSERGTTITSMSVSTTL 640
Query: 720 IPRSQGCSRETSP 732
+ S+ + T+P
Sbjct: 641 VASSEASTLSTTP 653
Score = 41.6 bits (96), Expect = 0.006
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S+S V SS++S E + P S GST R+ VSTK ++++ + S +
Sbjct: 2541 DSNSPVVTSTEISSSATSAEGTSMPTSTYSE--GSTPLRSMPVSTKPLASSEASTLSTTP 2598
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYA-SLGRI--RTRRQSSGSATNVASTPD 658
+D + + ++ SSS T +S P + SL I T +S A+ +++TP
Sbjct: 2599 VDTSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPV 2658
Query: 659 NRGRSRAKVVSQSQRSRSANPA-GAGSRSSSPGK-------------LLGSGYGGL--TG 702
+ +R V + + S S A G+ +S+PG+ LL + T
Sbjct: 2659 D---TRTLVTTSTGTSSSPTTAEGSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTT 2715
Query: 703 GSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
PVT S+E S ++G S S
Sbjct: 2716 PVDTSTPVTTSAEASSSPTTAEGTSMRIS 2744
Score = 39.3 bits (90), Expect = 0.028
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 29/215 (13%)
Query: 540 LKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSP--TGSTTSRASTVSTKSVSTTGSLQR 597
L + ++ S P + S +SS + S + S GST + VST V ++ +
Sbjct: 1534 LSTTPAVTSTPVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTL 1593
Query: 598 SRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRI--RTRRQSSGSATNVAS 655
S + ID +A ++ SSS+ S + P L I T +S A+ +++
Sbjct: 1594 STTPIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSIPVSTTPVASPEASTLST 1653
Query: 656 TPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSR--------- 706
TP + S + V++ ++ S S PA +S P G LT + R
Sbjct: 1654 TPVD---SNSPVITSTEVSSSPTPA---EGTSMPTSTYTEGRTPLTSITVRTTPVASSAI 1707
Query: 707 ----------GPPVTPSSEKRSKIPRSQGCSRETS 731
PVT S+E RS S+G S S
Sbjct: 1708 STLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNS 1742
Score = 38.9 bits (89), Expect = 0.037
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 20/206 (9%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
DS + + +SSS + + ++ GST + VST V+++ + S + +D
Sbjct: 419 DSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVD 478
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYA---SLGRIRTRRQSSGSATNVASTPDNR 660
+ ++ SSS T +S P + + + T +S A+ +++TP +
Sbjct: 479 SKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVD- 537
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPG-------------KLLGSGYGGLTG--GSS 705
S S S S P G +S+P +L+ S T +
Sbjct: 538 -TSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPAD 596
Query: 706 RGPPVTPSSEKRSKIPRSQGCSRETS 731
VT SSE S ++G S TS
Sbjct: 597 SNTFVTTSSEASSSSTTAEGTSMPTS 622
Score = 38.9 bits (89), Expect = 0.037
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 530 SSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSV 589
SS L + ++ + V+ SSS++ + + P S GST + VST+ V
Sbjct: 1056 SSETSTLSTTPADTSTPVTTYSQASSSSTTADGTSMPTSTYSE--GSTPLTSVPVSTRLV 1113
Query: 590 STTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGS----YASLGRIRTRRQ 645
++ + S + +D + + ++ SSS T +S PP AS+ + T
Sbjct: 1114 VSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASM-PVSTTLV 1172
Query: 646 SSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSR-SSSPGKLLGSGYGGLTGGS 704
S A +++TP + S+ +V + ++ S A S +S+PG+
Sbjct: 1173 VSSEANTLSTTPVD---SKTQVATSTEASSPPPTAEVTSMPTSTPGE------------- 1216
Query: 705 SRGPPVTPSSEKRSKIPRSQGCSRETSP 732
R P+T + + + S+ + TSP
Sbjct: 1217 -RSTPLTSMPVRHTPVASSEASTLSTSP 1243
Score = 38.5 bits (88), Expect = 0.048
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 29/198 (14%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S++ V+ SSS++ E + P S TT + +VST V+++ + S +
Sbjct: 596 DSNTFVTTSSEASSSSTTAEGTSMPTSTYSER--GTTITSMSVSTTLVASSEASTLSTTP 653
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR------IRTRRQSSGSATNVAS 655
+D N + ++ +SSS T + ++P +Y + T +S A+ +++
Sbjct: 654 VDSNTPVTTSTEATSSSTT---AEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLST 710
Query: 656 TPDNRGRSRAKVVSQSQRSRSANPA-GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSS 714
TP + + V + ++ S S A GA +S+P S P+T
Sbjct: 711 TPVD---TSTPVTTSTEASSSPTTADGASMPTSTP--------------SEGSTPLTSMP 753
Query: 715 EKRSKIPRSQGCSRETSP 732
++ + S+ + T+P
Sbjct: 754 VSKTLLTSSEASTLSTTP 771
Score = 36.2 bits (82), Expect = 0.24
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 25/224 (11%)
Query: 527 TLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVST 586
T+ SS L + L ++ + V+ SS ++ + + P A GST + +ST
Sbjct: 1937 TVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGTSMPTPAYSE--GSTPLTSMPLST 1994
Query: 587 KSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYAS--LGR-IRTR 643
V ++ + S + +D + A+ ++ SSS T +S P + G + T
Sbjct: 1995 TLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGMPVSTT 2054
Query: 644 RQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGK---LLGS----- 695
S +++TP + S+ +V + ++ S SA G+ S+P + LL S
Sbjct: 2055 LVVSSEGNTLSTTPVD---SKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPLST 2111
Query: 696 --------GYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETS 731
T S P +T + S IP ++G S +TS
Sbjct: 2112 TPVASPEASTLSTTPVDSNSPVITSTEVSSSPIP-TEGTSMQTS 2154
Score = 35.8 bits (81), Expect = 0.31
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 545 SIVSLPQSDRSS--SSSQESLNRPLSAKR-SPTGSTTSRAST------VSTKSVSTTGSL 595
S +S+ D S+ ++S E + P +A+ S ST S ST VST V+++ +
Sbjct: 352 STLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEAS 411
Query: 596 QRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYA---SLGRIRTRRQSSGSATN 652
S +D + S+ SSS T +S A P + + + T +S A+N
Sbjct: 412 TTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASN 471
Query: 653 VASTPDNRGRSRAKVVSQSQRSRS-------ANPAGAGSRSSSPGKLLGSGYGGLTGGSS 705
+++TP + S+ +V + ++ S S + P S S+P L + SS
Sbjct: 472 LSTTPVD---SKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTP--LTSMSVSTMPVASS 526
Query: 706 R-----------GPPVTPSSEKRSKIPRSQGCSRETS 731
PVT SSE S +G S TS
Sbjct: 527 EASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTS 563
Score = 35.4 bits (80), Expect = 0.41
Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 29/198 (14%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S+S V+ SS + E + P S G T + VST V+T+ S +
Sbjct: 832 DSNSPVTTSTEVSSSPTPAEGTSMPTSTYSE--GRTPLTSMPVSTTLVATSAISTLSTTP 889
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRG 661
+D + + ++ SS T+ +S PG +T + S PD
Sbjct: 890 VDTSTPVTNSTEARSSPTTSEGTSMPTSTPGE---------------GSTPLTSMPD--- 931
Query: 662 RSRAKVVSQSQRSRSANPAGAGS-------RSSSPGKLLGSGYGGLTGGSSRGPPVTPSS 714
S VVS R+ SA P + +SSP G+ T S P+T +
Sbjct: 932 -STTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTST-PSEGTTPLTSTP 989
Query: 715 EKRSKIPRSQGCSRETSP 732
+ + S+ + T+P
Sbjct: 990 VSHTLVANSEASTLSTTP 1007
Score = 35.0 bits (79), Expect = 0.53
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
DS L S +SS + + GST VST V+++ + S + D
Sbjct: 1009 DSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPAD 1068
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR------IRTRRQSSGSATNVASTP 657
+ + S+ SSSS T + ++P +Y+ + TR S A+ +++TP
Sbjct: 1069 TSTPVTTYSQASSSSTT---ADGTSMPTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTP 1125
Query: 658 DNRGRSRAKVVSQSQRSRSANPAGAGSRSSSP 689
+ + V + ++ S S A S +SP
Sbjct: 1126 VD---TSIPVTTSTEASSSPTTAEGTSIPTSP 1154
Score = 34.3 bits (77), Expect = 0.91
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
DS L S +SSS + + GST + VST +V+++ + S + D
Sbjct: 3248 DSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPAD 3307
Query: 604 VNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLG------RIRTRRQSSGSATNVASTP 657
+ + S+ SSS P + ++P +Y+ T S A+ +++TP
Sbjct: 3308 TSTPVTTYSQASSS---PPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTP 3364
Query: 658 DNRGRSRAKVVSQSQRSRSANPA-GAGSRSSSPGK 691
+ + V + ++ S S A G +SSP +
Sbjct: 3365 VD---TSTPVTTSTEASLSPTTAEGTSIPTSSPSE 3396
Score = 33.9 bits (76), Expect = 1.2
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 555 SSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKV 614
SS ++ E + P+S TS + VST V+++ + SR+ D + + ++
Sbjct: 2967 SSPTTAEGTSMPISTPGERRTPLTSMS--VSTMPVASSEASTLSRTPADTSTPVTTSTEA 3024
Query: 615 SSSSGTTPFSSAAALPPGSYA---SLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQS 671
SSS T + P + + + T + A+ +++TP + S + VV+ +
Sbjct: 3025 SSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVD---SNSPVVTST 3081
Query: 672 QRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSS 714
+ S S PA +S P G LTG PVT S+
Sbjct: 3082 EVSSSPTPA---EGTSMPISTYSEGSTPLTGVPVSTTPVTSSA 3121
Score = 33.1 bits (74), Expect = 2.0
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 26/226 (11%)
Query: 548 SLPQSDRSSSSSQESLNRPLSAKRSPT--GSTTSRASTVSTKSVSTTGSLQRSRSDIDVN 605
S P + + +SS + S SP G+T + VST V ++ + S + +D +
Sbjct: 2425 STPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTS 2484
Query: 606 AAASAKSKVSSSSGTTPFSSAAALPPGSYASLGR-------IRTRRQSSGSATNVASTPD 658
+ ++ SSS P ++ + P S AS G + T +S A+ +++TP
Sbjct: 2485 TPMTTSTEASSS----PTTAEDIVVPISTASEGSTLLTSIPVSTTPVASPEASTLSTTPV 2540
Query: 659 NRGRSRAKVVSQSQRSRSAN-------PAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVT 711
+ S + VV+ ++ S SA P S S+P + + L + T
Sbjct: 2541 D---SNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSEASTLSTT 2597
Query: 712 PSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRV 757
P + IP + +SP + P + S+ ++ V
Sbjct: 2598 PVD---TSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILV 2640
Score = 31.6 bits (70), Expect = 5.9
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 9/173 (5%)
Query: 544 DSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
D L S ++SSS + + + GST + ST V+++ ++ + ++
Sbjct: 183 DMSTPLTTSTQASSSPTTPESTTIPKSTNSEGSTPLTSMPASTMKVASSEAITLLTTPVE 242
Query: 604 VNAAASAKSKVSSSSGTTPFSSAA-ALPPGSYASLGR--IRTRRQSSGSATNVASTPDNR 660
++ + ++ SSS T S + + P G L R + S A+ +++TP
Sbjct: 243 ISTPVTISAQASSSPTTAEGPSLSNSAPSGGSTPLTRMPLSVMLVVSSEASTLSTTP--- 299
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPS 713
+ V++ ++ S S A +S P G LT + PV S
Sbjct: 300 AATNIPVITSTEASSSPTTA---EGTSIPTSTYTEGSTPLTSTPASTMPVATS 349
Score = 31.6 bits (70), Expect = 5.9
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 23/194 (11%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAK---RSPTGSTTSRASTVSTKSVSTTGSLQRS 598
NS I S S SS + E + P S R+P S T R + V++ ++ST +
Sbjct: 1659 NSPVITSTEVS--SSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVD 1716
Query: 599 RSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPD 658
S V + A+S ++S GT+ +S + S+ + T S A+ +++TP
Sbjct: 1717 NS-TPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSI-PVSTTPVLSSEASTLSATPI 1774
Query: 659 NRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRS 718
+ + V+ S + S+ G +S P L G P+T + +
Sbjct: 1775 D----TSTPVTTSTEATSSPTTAEG--TSIPTSTLSEGM----------TPLTSTPVSHT 1818
Query: 719 KIPRSQGCSRETSP 732
+ S+ + T+P
Sbjct: 1819 LVANSEASTLSTTP 1832
Score = 31.6 bits (70), Expect = 5.9
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 526 HT-LESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTV 584
HT + SS L + ++ + V+ SS ++ E + P+S + GST + V
Sbjct: 2819 HTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPIST--ASEGSTLLTSIPV 2876
Query: 585 STKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYA---SLGRIR 641
ST V+++ + S + +D + + ++ SSS T +S P + + +
Sbjct: 2877 STTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVSTPLTSILVS 2936
Query: 642 TRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA-GAGSRSSSPGK 691
T + A+ +++TP + +R V + ++ S S A G S+PG+
Sbjct: 2937 TVPVAGSEASTLSTTPVD---TRTPVTTSAEASSSPTTAEGTSMPISTPGE 2984
Score = 31.6 bits (70), Expect = 5.9
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 23/208 (11%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
+S+S V SS + E + P+S GST VST V+++ S +
Sbjct: 3072 DSNSPVVTSTEVSSSPTPAEGTSMPISTYSE--GSTPLTGVPVSTTPVTSSAISTLSTTP 3129
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYA---SLGRIRTRRQSSGSATNVASTPD 658
+D + + ++ SS T+ +S P + + + T S + +++TP
Sbjct: 3130 VDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPV 3189
Query: 659 NRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGK----LLGSGYGGLTGGSSR-------- 706
+ + V + ++ + S G +S+P + L SS
Sbjct: 3190 D---TSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTP 3246
Query: 707 ---GPPVTPSSEKRSKIPRSQGCSRETS 731
P+T S+E S P ++G S TS
Sbjct: 3247 VDSNTPLTTSTEASSSPPTAEGTSMPTS 3274
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 44.7 bits (104), Expect = 7e-04
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 12/223 (5%)
Query: 542 NSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSD 601
++ ++ + P + S +S P + K SP+ S+ + T + S G+ +++ D
Sbjct: 36 SAGNVSTHPSLSQRPGGSTKSHPEPQTPKDSPSKSSAEAQTPEDTPNKS--GAEAKTQKD 93
Query: 602 IDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTP-DNR 660
+ A AK++ S+S + S A + S ++T + S+G + A TP D+
Sbjct: 94 SSNKSGAEAKTQKGSTSKSG--SEAQTTKDSTSKSHPELQTPKDSTGKSGAEAQTPEDSP 151
Query: 661 GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
RS A+ +Q S S + + A + P K G G S G + +
Sbjct: 152 NRSGAEAKTQKD-SPSKSGSEAQTTKDVPNKSGADGQTPKDGSSKSG----AEDQTPKDV 206
Query: 721 PRSQGCSRETSPNRIGLDRFGLGQPGRIPGSVNAMRVLSTSTD 763
P G ++T + G ++ G + G I G + TS D
Sbjct: 207 PNKSGAEKQTPKD--GSNKSGAEEQGPIDGPSKSGAEEQTSKD 247
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 557 SSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSS 616
+S +E N+ S +RS + S +S + + S++S S + S RSRS ++++ ++S+ SS
Sbjct: 187 ASEEEDSNKKKSNRRSRSKSRSSHSRS-SSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS 245
Query: 617 SSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRS 676
+ S + S+ R R SS S++ + +R RS + + +R+RS
Sbjct: 246 RERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRS 305
Query: 677 ANP 679
+P
Sbjct: 306 RSP 308
Score = 38.9 bits (89), Expect = 0.037
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 554 RSSSSSQESLNRPLSAKRSPTGSTT-----SRASTVSTKSVSTTGSLQRSRSDIDVNAAA 608
RS S S+ S +R S SP+ S + SR+S+ S++S S + S +RSRS + ++
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSS-SSQSRSRSSSRERSRSRGSKSRSS 259
Query: 609 SAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRA 665
S + SSS +SS+++ P R R++S +++ R RSR+
Sbjct: 260 SRSHRGSSSPRKRSYSSSSSSPE---------RNRKRSRSRSSSSGDRKKRRTRSRS 307
Score = 33.1 bits (74), Expect = 2.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 639 RIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYG 698
R R++ +SS S ++ S+ + RSR+ RSRS + + + SRS S + G
Sbjct: 201 RSRSKSRSSHSRSSSRSSSPSSSRSRS-------RSRSRSSSSSQSRSRSSSRERSRSRG 253
Query: 699 GLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNR 734
+ SSR + S KRS S R +R
Sbjct: 254 SKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 32.3 bits (72), Expect = 3.5
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 603 DVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGR 662
D N S + S S + SS+ + P S S R R+R SS +R R
Sbjct: 192 DSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSS---------QSRSR 242
Query: 663 SRAKVVSQSQRSRSANPAGAGSRSSSPGK 691
S ++ S+S+ S+S + + + SSSP K
Sbjct: 243 SSSRERSRSRGSKSRSSSRSHRGSSSPRK 271
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 43.1 bits (100), Expect = 0.002
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 550 PQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAAS 609
P D S ES + S RSPT + + +++ S D AAA+
Sbjct: 295 PTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGS------------DEEAAAA 342
Query: 610 AKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVS 669
A + +++SG T A PG A RR+SS S+++ +++ + RS ++ S
Sbjct: 343 AAA--AAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSS 400
Query: 670 QSQ--------------RSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSE 715
+S+ RSRS + + + SR S + G + G GGS G + S
Sbjct: 401 RSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSG--GGSRDGHRYSRSPA 458
Query: 716 KRSKI-PRSQGCSRETSPNR 734
+R PR + SR S +R
Sbjct: 459 RRGGYGPRRRSRSRSHSGDR 478
Score = 34.3 bits (77), Expect = 0.91
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Query: 565 RPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAA---ASAKSKVSSSSGTT 621
R SA+R + S++S +++ ++ S S++ S RSR + A ++S+ S S +
Sbjct: 369 RNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSR 428
Query: 622 PFSSAAALPPGSYASLGRIRT-RRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPA 680
+ + G S G R R S A P R RSR+ + +R
Sbjct: 429 SRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRH 488
Query: 681 GAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDR 739
+ SRS S L S LT S P +PS + RSQ S SP R L R
Sbjct: 489 HSSSRSRSSWSLSPSRSRSLTRSRSHSP--SPSQSRSRSRSRSQ--SPSPSPAREKLTR 543
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 42.7 bits (99), Expect = 0.003
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 556 SSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS-DIDVNAAASAKSKV 614
S S S +R +++S + S +S++S ++S S +GS RS+S + + S K K
Sbjct: 188 SRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKS 247
Query: 615 SSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRS 674
S S S + + S + + Q++ + S +R +S++K S+SQ
Sbjct: 248 RSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQER 307
Query: 675 R-SANPAGAGSRSSSPGKLL---GSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRET 730
R G+ SR S K L S G SR + S +KR RS+ SR
Sbjct: 308 RVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSR 367
Query: 731 SPNRIGLDR 739
S +R +R
Sbjct: 368 SRSRSKSER 376
Score = 38.1 bits (87), Expect = 0.063
Identities = 67/311 (21%), Positives = 105/311 (33%), Gaps = 42/311 (13%)
Query: 553 DRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKS 612
D+ S + S +R S RS + S SR S + S ++ S RSRS + + ++S
Sbjct: 175 DKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRS 234
Query: 613 KVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQ 672
+ S S R + + S S S + G+SR+K Q++
Sbjct: 235 RSQSRS--------------------RSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAE 274
Query: 673 RSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKIPRSQGCSRETSP 732
N +S SP S + + SR EKR + R + +
Sbjct: 275 EKIQNNDNVGKPKSRSP-----SRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQ 329
Query: 733 NRIGLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYG 792
+R G GS + R S S D + SRS+ + R G
Sbjct: 330 SRSRSRSKG--------GSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRG 381
Query: 793 MYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQ 852
D A S + + V++ H S S ++EG +
Sbjct: 382 SKRDSKAGSSKKKKKEDTDRSQSRS-------PSRSVSKEREHAKSE--SSQREGRGESE 432
Query: 853 NLLKSQRTLSR 863
N +Q T SR
Sbjct: 433 NAGTNQETRSR 443
Score = 35.8 bits (81), Expect = 0.31
Identities = 45/201 (22%), Positives = 72/201 (35%), Gaps = 9/201 (4%)
Query: 518 SREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGST 577
SR H S + + ++N+D+ V P+S S +S +R S +R
Sbjct: 255 SRSRSHSAGKSRSKSKDQAEEKIQNNDN-VGKPKSRSPSRHKSKSKSRSRSQERRVEEEK 313
Query: 578 TSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASL 637
S ++ S S RSRS + + ++SK S S
Sbjct: 314 RGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSRE--------ESR 365
Query: 638 GRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGY 697
R R+R +S S + G S+ K + RS+S +P+ + S+ K S
Sbjct: 366 SRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425
Query: 698 GGLTGGSSRGPPVTPSSEKRS 718
G + G S RS
Sbjct: 426 EGRGESENAGTNQETRSRSRS 446
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 42.7 bits (99), Expect = 0.003
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 552 SDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDIDVNAAASAK 611
S + S S++ S++ L +K +PT T S+ S ++ GS + S + +
Sbjct: 1060 SPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALVAQGSHSSTNSPVHKQPSGMNI 1119
Query: 612 SKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNRGRSRAKVVSQS 671
S+ S + P S + LPP Q+ TN +ST S + +
Sbjct: 1120 SRQSPTLNLLPSSRTSGLPP---------TKNLQAPSKLTNSSSTGTVGKNSLSGIAMNV 1170
Query: 672 QRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGPPVTPSSEKRSKI 720
SR +N +G+ +S GSG G T S P PS+ S +
Sbjct: 1171 PASRGSNLNSSGANRTSLSGGTGSGTQGATKPLS--TPHRPSTASGSSV 1217
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,535,370
Number of Sequences: 37866
Number of extensions: 2301570
Number of successful extensions: 14057
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 11744
Number of HSP's gapped (non-prelim): 2194
length of query: 1471
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1356
effective length of database: 13,892,928
effective search space: 18838810368
effective search space used: 18838810368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.