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Search of human proteins with 21361664
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361664 lung cancer-related protein 8 isoform a [Homo
sapiens]
(609 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens] 1234 0.0
gi|154800469 lung cancer-related protein 8 isoform c [Homo sapiens] 1163 0.0
gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens] 1150 0.0
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 39 0.014
gi|4757812 ATP synthase, H+ transporting, mitochondrial F0 compl... 38 0.031
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 37 0.040
gi|51479129 ATP synthase, H+ transporting, mitochondrial F0 comp... 37 0.069
gi|4557719 DNA ligase I [Homo sapiens] 35 0.15
gi|65506891 solute carrier family 3, member 2 isoform c [Homo sa... 35 0.20
gi|209969819 hypothetical protein LOC253143 [Homo sapiens] 35 0.20
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 35 0.26
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 35 0.26
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa... 34 0.34
gi|109637791 transcription factor-like nuclear regulator [Homo s... 34 0.34
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 34 0.45
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 34 0.45
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 34 0.45
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens] 33 0.58
gi|223555917 metadherin [Homo sapiens] 33 0.76
gi|109637761 calpastatin isoform g [Homo sapiens] 33 0.76
gi|109637753 calpastatin isoform a [Homo sapiens] 33 0.76
gi|55770834 centromere protein F [Homo sapiens] 33 0.76
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 33 0.76
gi|21493045 A-kinase anchor protein 6 [Homo sapiens] 33 1.00
gi|120952764 mastermind-like domain containing 1 [Homo sapiens] 33 1.00
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 1.3
gi|7662208 GTPase regulator associated with the focal adhesion k... 32 1.3
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 32 1.3
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 32 1.3
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 32 1.7
>gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens]
Length = 609
Score = 1234 bits (3194), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
Query: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600
GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
Sbjct: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600
Query: 601 DCRSKTCLD 609
DCRSKTCLD
Sbjct: 601 DCRSKTCLD 609
>gi|154800469 lung cancer-related protein 8 isoform c [Homo sapiens]
Length = 583
Score = 1163 bits (3009), Expect = 0.0
Identities = 577/577 (100%), Positives = 577/577 (100%)
Query: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
Query: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK 577
GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK
Sbjct: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK 577
>gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens]
Length = 573
Score = 1150 bits (2974), Expect = 0.0
Identities = 573/609 (94%), Positives = 573/609 (94%), Gaps = 36/609 (5%)
Query: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
Query: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
KPQCWNAMTQKPQLISPQGERLSQ
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQ------------------------------------ 504
Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600
GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
Sbjct: 505 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 564
Query: 601 DCRSKTCLD 609
DCRSKTCLD
Sbjct: 565 DCRSKTCLD 573
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 38.9 bits (89), Expect = 0.014
Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 11/226 (4%)
Query: 53 KKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDI 112
+K K P+K+ KA KE+ + E ++ +KP++ P E+A T ++
Sbjct: 797 EKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEK 856
Query: 113 KNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGAS 172
K+ + + KP ++E + K K+E A+D + + E A
Sbjct: 857 KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAED-----KKKVPTPEKEAP 911
Query: 173 LLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDKID--PQRQELLVKLLDVPTGDCHI 230
V E + + + + P+D + +K + P++++ + P
Sbjct: 912 AKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKP----EE 967
Query: 231 SPKNVSDGVKRVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTE 276
PK + + +TL K TD ++ PEK TE
Sbjct: 968 KPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATE 1013
Score = 38.5 bits (88), Expect = 0.018
Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 15/221 (6%)
Query: 4 NPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIKDLI 63
+PP E P K KS + + +K PA + +K K P K+
Sbjct: 503 SPPAEEAA----SPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA 558
Query: 64 KAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKML 123
K+ + E EE S V PE+ A + A K+ + K+P++ K
Sbjct: 559 KSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA---KSPAEAKSPEKAKSPVKEEAKSP 615
Query: 124 KNTKPMTTFQEETKAQFYASEKT-SPKRELAKDLPKS----GESRCNPSEAGASLLVGSI 178
K + ++ A+ + EK SP +E AK K+ E +P +A + + +
Sbjct: 616 AEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAK 675
Query: 179 EPSLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVK 219
P + K + P + +K + P++ + VK
Sbjct: 676 SPEKAKSPVKAEAKSP---EKAKSPVKEEAKSPEKAKSPVK 713
Score = 32.3 bits (72), Expect = 1.3
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 53 KKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPL-------PAVGLERAAT 105
+K K P+K+ K K EE S PE+ KT + PA R+
Sbjct: 720 EKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK-AKTLDVKSPEAKTPAKEEARSPA 778
Query: 106 TKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGE 161
K + K+P++ K + K + +E+ K A EK PK+E K K E
Sbjct: 779 DKFPEKAKSPVKEEVKSPEKAK--SPLKEDAK----APEKEIPKKEEVKSPVKEEE 828
>gi|4757812 ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit F2 isoform 2a [Homo sapiens]
Length = 94
Score = 37.7 bits (86), Expect = 0.031
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 499 GERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQKGWIRCNT---TIRKSGFG 555
GE + V + ++ ++ E P+ + +FS + GA Q+G+ R ++K
Sbjct: 5 GECPAPVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSIS 64
Query: 556 GITMLFTGYFVLCCSWSFRRLK 577
GITM+ Y + S+S++ LK
Sbjct: 65 GITMVLACYVLFSYSFSYKHLK 86
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 37.4 bits (85), Expect = 0.040
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 36 PTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPL 95
P D+K + KP K+ K PIK K K +E++ E ++ K +P++ VK
Sbjct: 646 PEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETP 705
Query: 96 P---AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKREL 152
P +++ + K+ K P + K+ K+ K +T E K K K E
Sbjct: 706 PKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEES 765
Query: 153 AKDLPKSGESRCNPSEAG 170
K K + P E G
Sbjct: 766 VK---KDSVAAGKPKEKG 780
Score = 32.3 bits (72), Expect = 1.3
Identities = 67/315 (21%), Positives = 118/315 (37%), Gaps = 49/315 (15%)
Query: 37 TDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLP 96
TD K +K T+ + K+K E + E +E+ K V K ++T P
Sbjct: 626 TDVKPKAAKEKTVKKETKVK-----------PEDKKEEKEKPKKEVAKKEDKT------P 668
Query: 97 AVGLERAATTKADKDIKNPI------QPSFKMLKNTKPMTTFQEETKAQ--FYASEKTSP 148
E+ + K++K I +P ++ K T P +E K + E+ P
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEP 728
Query: 149 KRELAKDLPKSGESRCNP-SEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLD 207
K+E+ K LPK + P SEA + P +K S + G +K+
Sbjct: 729 KKEI-KKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKE--KGKIKVI 785
Query: 208 KIDPQRQELLVKLLD---------VPTGDCHISPKNVSDGVKRVRTLLSNERD-SKGRDH 257
K + + E + + G I P + ++ R+L+S+ D +K +
Sbjct: 786 KKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGP---AKELEAERSLMSSPEDLTKDFEE 842
Query: 258 LSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQE-------KGLTLGVETCGSK 310
L DVT P+ LK + + V++K+ + G+ T +
Sbjct: 843 LKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKEREVTKGPAESPDEGITTTEGE 902
Query: 311 GNAEKSMSATEKQER 325
G E++ E E+
Sbjct: 903 GECEQTPEELEPVEK 917
>gi|51479129 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit F2 isoform 2b [Homo sapiens]
Length = 88
Score = 36.6 bits (83), Expect = 0.069
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 503 SQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQKGWIRCNT---TIRKSGFGGITM 559
S V + ++ ++ E P+ + +FS + GA Q+G+ R ++K GITM
Sbjct: 3 SVVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITM 62
Query: 560 LFTGYFVLCCSWSFRRLK 577
+ Y + S+S++ LK
Sbjct: 63 VLACYVLFSYSFSYKHLK 80
>gi|4557719 DNA ligase I [Homo sapiens]
Length = 919
Score = 35.4 bits (80), Expect = 0.15
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 28 CKMIGPTIP----------TDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEER 77
C + P P +D S P+ +P+ + + + + E ++E+E+R
Sbjct: 87 CSQVSPPRPATSPENNASLSDTSPMDSSPSGIPKRRTARKQLPKRTIQEVLEEQSEDEDR 146
Query: 78 NSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETK 137
+K K E+ + P ++ AT K +D P P KP+ T + ET
Sbjct: 147 EAK---RKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTP-------PKPLKTSKAETP 196
Query: 138 AQFYASEKTSPKRELAKDLPKSGESRCNP 166
+ + + + K+EL ++ ++ R P
Sbjct: 197 TESVSEPEVATKQELQEEEEQTKPPRRAP 225
>gi|65506891 solute carrier family 3, member 2 isoform c [Homo
sapiens]
Length = 630
Score = 35.0 bits (79), Expect = 0.20
Identities = 19/82 (23%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 135 ETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLP 194
+T + AS P ++ ++G S C ++AG LL S P+L++++ + + T+
Sbjct: 46 QTGLELLASGDPLPSASQNAEMIETG-SDC-VTQAGLQLLASSDPPALASKNAEVTGTMS 103
Query: 195 NDVQTTSGDLKLDKIDPQRQEL 216
D + +++L++++P++Q +
Sbjct: 104 QDTEVDMKEVELNELEPEKQPM 125
>gi|209969819 hypothetical protein LOC253143 [Homo sapiens]
Length = 2151
Score = 35.0 bits (79), Expect = 0.20
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 21/136 (15%)
Query: 305 ETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRETTYQ 364
+ C S+G + K M +++++E HG N N +D + S G L P++ +
Sbjct: 980 DECKSEGQSAKEMLSSDQRETVTEPHGEVNHNQKDLLV---SSGSNNSLPCGSPKKCNLK 1036
Query: 365 FHSVSQS----SSQSLASLATTFLQEKKAEAQNHNCVPDVKA--LMESPEGQLSLEPKSD 418
V S S++ + + T K AE V DVKA L++ Q L + D
Sbjct: 1037 GAFVKMSGCDESTEGMVDIVYTDCSNKLAEG-----VLDVKASNLLDCGARQEKLAFQED 1091
Query: 419 S-------QFQASHTG 427
S + A+HTG
Sbjct: 1092 SRSTLSRRELDAAHTG 1107
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 34.7 bits (78), Expect = 0.26
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 15/216 (6%)
Query: 143 SEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSG 202
SEKT P E A+D ++ E+ A A L S P + + S +P T
Sbjct: 126 SEKTPPLEEQAEDKKENTENHSETPAAPA--LPPSAPPKPRPKPKPKKSPVPPKGATAGA 183
Query: 203 DLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLSGVP 262
K D++ P ++ P PK S R S+ + + G S P
Sbjct: 184 SHKGDEVPPIKKNTKAPGKQAPVP----PPKPASRNTTREAAGSSHSKKTTG-SKASASP 238
Query: 263 TDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
+ + + P+ + E+ +S K ++G + K +K + S +++ + S T
Sbjct: 239 STSSTSSRPKASKET--VSSKAGTVGTTKGKRKTDK------QPITSHLSSDTTTSGTSD 290
Query: 323 QERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIP 358
+ E+F +V G E Q S+ P
Sbjct: 291 LKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPP 326
Score = 30.0 bits (66), Expect = 6.5
Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 17/193 (8%)
Query: 283 KMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVT 342
K+S++GKI K K T + + E+ +S + +E + + +D
Sbjct: 33 KLSTIGKIFKPWKWRKKKTSD-KFRETSAVLERKISTRQSREELIRRGVLKELPDQDGDV 91
Query: 343 GKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQE----KKAEAQNHNCVP 398
+ H+ + I E+T + + V S T L+E KK +NH+ P
Sbjct: 92 TVNFENSNGHM-IPIGEESTREENVVKSEEGNGSVSEKTPPLEEQAEDKKENTENHSETP 150
Query: 399 DVKALMES--------PEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTP--QSPFTNHA 448
AL S P+ + S P + ASH G + P P Q+P
Sbjct: 151 AAPALPPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAP-VPPP 209
Query: 449 AAAGRKTLRSCMG 461
A R T R G
Sbjct: 210 KPASRNTTREAAG 222
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 34.7 bits (78), Expect = 0.26
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 15/216 (6%)
Query: 143 SEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSG 202
SEKT P E A+D ++ E+ A A L S P + + S +P T
Sbjct: 137 SEKTPPLEEQAEDKKENTENHSETPAAPA--LPPSAPPKPRPKPKPKKSPVPPKGATAGA 194
Query: 203 DLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLSGVP 262
K D++ P ++ P PK S R S+ + + G S P
Sbjct: 195 SHKGDEVPPIKKNTKAPGKQAPVP----PPKPASRNTTREAAGSSHSKKTTG-SKASASP 249
Query: 263 TDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
+ + + P+ + E+ +S K ++G + K +K + S +++ + S T
Sbjct: 250 STSSTSSRPKASKET--VSSKAGTVGTTKGKRKTDK------QPITSHLSSDTTTSGTSD 301
Query: 323 QERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIP 358
+ E+F +V G E Q S+ P
Sbjct: 302 LKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPP 337
Score = 30.0 bits (66), Expect = 6.5
Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 17/193 (8%)
Query: 283 KMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVT 342
K+S++GKI K K T + + E+ +S + +E + + +D
Sbjct: 44 KLSTIGKIFKPWKWRKKKTSD-KFRETSAVLERKISTRQSREELIRRGVLKELPDQDGDV 102
Query: 343 GKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQE----KKAEAQNHNCVP 398
+ H+ + I E+T + + V S T L+E KK +NH+ P
Sbjct: 103 TVNFENSNGHM-IPIGEESTREENVVKSEEGNGSVSEKTPPLEEQAEDKKENTENHSETP 161
Query: 399 DVKALMES--------PEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTP--QSPFTNHA 448
AL S P+ + S P + ASH G + P P Q+P
Sbjct: 162 AAPALPPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAP-VPPP 220
Query: 449 AAAGRKTLRSCMG 461
A R T R G
Sbjct: 221 KPASRNTTREAAG 233
>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
sapiens]
Length = 599
Score = 34.3 bits (77), Expect = 0.34
Identities = 12/50 (24%), Positives = 33/50 (66%)
Query: 167 SEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQEL 216
++AG LL S P+L++++ + + T+ D + +++L++++P++Q +
Sbjct: 45 TQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEPEKQPM 94
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 34.3 bits (77), Expect = 0.34
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 39/302 (12%)
Query: 110 KDIKNPIQPSFKMLKNTKPMTTFQEETKA---QFYASEKT----SPKRELAKDLPKSGES 162
++ + I P L+ KP+ Q + KA + EKT E+ KDL ++G
Sbjct: 1092 EETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEEIDKDLEETGRR 1151
Query: 163 RCNPSEAGASLL--VGSIEPSLSNQDRKYSS-TLPNDVQTTSGDLKLDKIDPQRQELLVK 219
+P E G + V +E L R+ SS +V + ++ D + +R+
Sbjct: 1152 EISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDLEETERE----- 1206
Query: 220 LLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSK-------GRDHLSGVPTDVTVTETPE 272
ISP+ +G + V+ + E D K R+ + + + E
Sbjct: 1207 ----------ISPQ--ENGPEEVKPVGKMETDLKEIREEISQREKVLAEFSAIREKEIDL 1254
Query: 273 KNTESLILSLKMSSLGKIQVMEKQEKGL-TLGVETCGSKGNAEKSMSATEKQERTVMSHG 331
K T + + GK+ V+E+ E L G E +G+ E + TE++ + G
Sbjct: 1255 KETGKRDIPIMEKVSGKMAVVEEMEADLKETGKENFRERGSEE--ICVTEEKVAELKQTG 1312
Query: 332 CENFNTRDSVTGKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEA 391
+ + R++ + S + L + + F +V Q+++S + + E
Sbjct: 1313 KTDISPRENELEETSTSRQTDTHLM--QSGSNDFSAVPSLDIQNISSEVLSMMHTPVEEK 1370
Query: 392 QN 393
+N
Sbjct: 1371 RN 1372
Score = 33.9 bits (76), Expect = 0.45
Identities = 71/344 (20%), Positives = 142/344 (41%), Gaps = 36/344 (10%)
Query: 5 PPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIKDLIK 64
P ++ P+ + FKR K +L + T +++ +Y+ K T KKM+ +
Sbjct: 1425 PLEIKPAPFVRSRFKRPKPNLARAALKRETTESEKYIYEKKSET----KKMETIVMQENN 1480
Query: 65 AKGKELETENEERNSKLVVDKPEQTV-----KTFPLPAVGLERAATTKADKDIKN----- 114
+ L ++++E + L++ + + T+ + LP ER + + K
Sbjct: 1481 EQTDTLPSQHDE--ASLMISREKDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEESQSA 1538
Query: 115 PIQPSFKMLK-NTKPMTTFQEETKAQFY--ASEKTSPKRELAKDLPKSGESR-CNPSEAG 170
P+Q + ++ T + TFQ+E K A + + ++ K+G+ + + EA
Sbjct: 1539 PVQKNDSVVSVGTNNVNTFQQEMKESVIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAK 1598
Query: 171 ASLLVGSIEPSLSNQDRKY----SSTLPNDVQTTSGDLKLDKI-DPQRQELLVKLLDVPT 225
+ G ++K +S + +++ S + ++ + Q Q +LV+ L V
Sbjct: 1599 GIIKEGRTILPKDETEKKVLTVSNSQIETEIEVPSSAVPEHRMYENQSQVVLVENLHVNK 1658
Query: 226 GDCHISPKN---VSDGVKRVRTLLSNERDSKGRDHL---SGVPTDVTVTETPEKNTESLI 279
+ I +N V + R + + GR H V VT ++ E E +
Sbjct: 1659 TNETIRHENKPYVPSSAQMTRRKFQKAKPNLGRAHSKKEEPVLEKVTTDQSKEGKPEDHL 1718
Query: 280 LSLKMSSLGKIQVMEKQEKGLTLGV----ETCGSKGNAEKSMSA 319
L K +S ++ + EK E +L V + GSK +A + A
Sbjct: 1719 LQ-KGASNTQLLLKEKAELLTSLEVSARKDCVGSKESALAKIDA 1761
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 33.9 bits (76), Expect = 0.45
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 184 NQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVR 243
N R+YS +P + + L DP+ + KL+ PT HI+ DG++ ++
Sbjct: 1526 NNKRRYSFRVPEEERMQQRREMLR--DPEMRN---KLISNPTNFNHIAHMGPGDGIQILK 1580
Query: 244 TLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQ 291
L N R + R SG + ++T++ + S+ S +S+ Q
Sbjct: 1581 DLPMNPRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQ 1628
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 33.9 bits (76), Expect = 0.45
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 184 NQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVR 243
N R+YS +P + + L DP+ + KL+ PT HI+ DG++ ++
Sbjct: 1445 NNKRRYSFRVPEEERMQQRREMLR--DPEMRN---KLISNPTNFNHIAHMGPGDGIQILK 1499
Query: 244 TLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQ 291
L N R + R SG + ++T++ + S+ S +S+ Q
Sbjct: 1500 DLPMNPRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQ 1547
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 33.9 bits (76), Expect = 0.45
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 15/207 (7%)
Query: 22 KSHLPYCKMIGPTIPTDQKVYQSKPAT-LPRAKKMKGPIKDLIKAKGKELETENEERNSK 80
+S + + + P + Q + P T LPR KG I + +K K + L+ E + +
Sbjct: 2003 QSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGIILEEMKVKSENLKEEPQSSEEE 2062
Query: 81 LVVDKPEQT-VKTFPL-PAVGLERAATTKADKDIKNPIQPSFKMLK-NTKPMTTFQEETK 137
+ +T +K+ P+ P G+ AT D+ + +M+ T+P+T K
Sbjct: 2063 SMSSVETRTLIKSEPVSPKNGVLPQAT--GDQKSGGKCETDRRMVAARTEPLTPNPASKK 2120
Query: 138 AQFY--ASEKTSPKRE-------LAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRK 188
+ + SE +S ++ S S C+ S +G+S S S S+
Sbjct: 2121 PRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSS 2180
Query: 189 YSSTLPNDVQTTSGDLKLDKIDPQRQE 215
+S+ + ++S + D+ + Q++E
Sbjct: 2181 STSSSSSSSSSSSEESDSDEEEAQKRE 2207
>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
Length = 1136
Score = 33.5 bits (75), Expect = 0.58
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
Query: 207 DKIDPQRQELLVKLLDVPTGDCHISP--KNVSDGVKRVRTLLSNERDSKGRDHLSGVPTD 264
D+ QR E++V++ + G+ + P + +DG + R ++SN+ DS +
Sbjct: 986 DESSNQRAEVVVQVPYLEAGEAVVYPLQEAAADGCRESR-VVSNDSDSDLEE-------- 1036
Query: 265 VTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQE 324
L+ S + S+LG + +E+Q+ +L V + GS +E+ + AT +++
Sbjct: 1037 ----------ASELLSSSEASALGHLSFLEQQQSEASLEVAS-GSHSGSEEQLEATARED 1085
Query: 325 RTVMSHG----CENFNTRDS 340
G FNT S
Sbjct: 1086 GDGDEDGPAQQLSGFNTNQS 1105
>gi|223555917 metadherin [Homo sapiens]
Length = 582
Score = 33.1 bits (74), Expect = 0.76
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 23/165 (13%)
Query: 35 IPTDQKVY----QSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTV 90
IP DQKV + LP K K K + + + EE ++ D P T
Sbjct: 419 IPDDQKVSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSTAQDTEELEKEIREDLPVNTS 478
Query: 91 KTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQ----FYASEKT 146
KT P + +D P+ ++KN++P+ T T + S+
Sbjct: 479 KTRPKQEKAFSLKTISTSD--------PAEVLVKNSQPIKTLPPATSTEPSVILSKSDSD 530
Query: 147 SPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSS 191
++ L ++ +S+ N + S+ PS + + + S
Sbjct: 531 KSSSQVPPILQETDKSKSNTKQ-------NSVPPSQTKSETSWES 568
>gi|109637761 calpastatin isoform g [Homo sapiens]
Length = 772
Score = 33.1 bits (74), Expect = 0.76
Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 11/180 (6%)
Query: 83 VDKPEQTVKTFPLP--AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQF 140
+ +P Q P P A R ++K ++P +P K + K + ++
Sbjct: 1 MSQPGQKPAASPRPRRAAAARRTHEHVSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRT 60
Query: 141 YASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIE-PSLSNQDRKYSSTLPNDVQT 199
YA S + A S S NP+E A + +E P L N+ + + + +
Sbjct: 61 YAGGTASATKVSASSGATSKSSSMNPTETKAIPVSQQMEGPHLPNKKKHKKQAVKTEPEK 120
Query: 200 TSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLS 259
S K + Q D + D H + K VS ++ + S E +K +D +S
Sbjct: 121 KSQSTKPKSLPKQAS-------DTGSNDAH-NKKAVSRSAEQQPSEKSTEPKTKPQDMIS 172
>gi|109637753 calpastatin isoform a [Homo sapiens]
Length = 791
Score = 33.1 bits (74), Expect = 0.76
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 16/192 (8%)
Query: 83 VDKPEQTVKTFPLP--AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQF 140
+ +P Q P P A R ++K ++P +P K + K + ++
Sbjct: 1 MSQPGQKPAASPRPRRAAAARRTHEHVSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRT 60
Query: 141 YASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIE-PSLSNQDRKYSSTLPNDVQT 199
YA S + A S S NP+E A + +E P L N+ + + + +
Sbjct: 61 YAGGTASATKVSASSGATSKSSSMNPTETKAIPVSQQMEGPHLPNKKKHKKQAVKTEPEK 120
Query: 200 TSGDLKLDKIDPQRQE------------LLVKLLDVPTGDCHISPKNVSDGVKRVRTLLS 247
S KL + ++ + L + D + D H + K VS ++ + S
Sbjct: 121 KSQSTKLSVVHEKKSQEGKPKEHTEPKSLPKQASDTGSNDAH-NKKAVSRSAEQQPSEKS 179
Query: 248 NERDSKGRDHLS 259
E +K +D +S
Sbjct: 180 TEPKTKPQDMIS 191
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 33.1 bits (74), Expect = 0.76
Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 40/293 (13%)
Query: 59 IKDLIKAKGKELETENEERNSKLVVDKPEQTVKTF--------PLPAVGLERAATTKADK 110
++DL+K+K L T + + S L D+ +F +P+ E +AD+
Sbjct: 763 LRDLLKSKDASLVTNEDHQRSLLAFDQQPAMHHSFANIIGEQGSMPSERSE--CRLEADQ 820
Query: 111 DIKNPIQPSFKMLKNTKPMTTFQEETKAQF------YASEKTSPKRELAKDLPKSGESRC 164
KN +L+N F E++ Q E K E+ ++L K+ E
Sbjct: 821 SPKNS-----AILQNRVDSLEFSLESQKQMNSDLQKQCEELVQIKGEIEENLMKA-EQMH 874
Query: 165 NPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKL--DKIDPQRQEL--LVK- 219
A S + ++ S + TL + ++ +L+L DK++ ++ E+ L K
Sbjct: 875 QSFVAETSQRISKLQEDTSAHQNVVAETL-SALENKEKELQLLNDKVETEQAEIQELKKS 933
Query: 220 --LLDVPTGDCHISPKNVSDGVKRVRTLLS-NERDSKGRDHLSGVPTDVTVTETPEK--- 273
LL+ + + + +S K + +++S N+R+ + +G ++ + EK
Sbjct: 934 NHLLEDSLKELQLLSETLSLEKKEMSSIISLNKREIEELTQENGTLKEINASLNQEKMNL 993
Query: 274 --NTESL--ILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
+ES + + S+ ++ KQEK + L + C GNA + +S K
Sbjct: 994 IQKSESFANYIDEREKSISELSDQYKQEKLILL--QRCEETGNAYEDLSQKYK 1044
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 33.1 bits (74), Expect = 0.76
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 6 PRMEVCPYCKKPFKRLK---SHLPYCKM---IGP-------TIPTDQKVYQSKPATL--- 49
P++ CP C KPF LK SHL C + +GP + T Q S P
Sbjct: 331 PQIPECPICGKPFLTLKSRTSHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFS 390
Query: 50 --PRAKKMKGPIKDLIKAKGKEL-ETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATT 106
R K +GP K +++ E +E+ + + + E +PA+ LE A +
Sbjct: 391 DHSRGLKRRGPTSKKEPRKRRKVDEAPSEDLLVAMALSRSEMEPGA-AVPALRLESAFSE 449
Query: 107 KADKDIKN-------PIQPSFKMLKNTKPMTTFQEETKAQFYASEK 145
+ + +N P+ P ++++++ T Q E + SE+
Sbjct: 450 RIRPEAENKSRKKKPPVSPPLLLVQDSE-TTGRQIEDRVALLLSEE 494
>gi|21493045 A-kinase anchor protein 6 [Homo sapiens]
Length = 2319
Score = 32.7 bits (73), Expect = 1.00
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 18/196 (9%)
Query: 34 TIPTDQKVYQSKPATLPRAKKMKGPIK---DLIKAKGKELETENEERNSKLVVDKP--EQ 88
T P D Y P + G + D I G E TE + S V DK E+
Sbjct: 250 TKPFDSWSYSEMEKEFPELIRSVGLLTVAADSISTNGSEAVTEEVSQVSLSVDDKGGCEE 309
Query: 89 TVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSP 148
+ GL ++ + + + N QPS + ++ ++ + Q E +P
Sbjct: 310 DNASAVEEQPGLTLGVSSSSGEALTNAAQPSSETVQQESSSSSHHDAKNQQPVPCENATP 369
Query: 149 KRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDK 208
KR + + +S P+ L + T ND++ G ++
Sbjct: 370 KRTIRDCFNYNEDSPTQPTLPKRGLFL-------------KEETFKNDLKGNGGKRQMVD 416
Query: 209 IDPQRQELLVKLLDVP 224
+ P+ L+D P
Sbjct: 417 LKPEMSRSTPSLVDPP 432
>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
Length = 774
Score = 32.7 bits (73), Expect = 1.00
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 32 GPTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETEN---EERNSKLVVDKPEQ 88
GPT+P +K+ S PA +++ + + EL+ E + LV+D P+
Sbjct: 157 GPTVPYYEKI-NSVPAVDQELQELLEELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQA 215
Query: 89 TVKTFPLPAVGLERAATTKADKD 111
T+ T P P+V + + + K+
Sbjct: 216 TLSTTPKPSVQMSHLESLASSKE 238
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.3 bits (72), Expect = 1.3
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 294 EKQEKGLTLGVETCGSKG---NAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGER 350
E +E+G G CG+ G +A S +A+ + S + ++ S + S
Sbjct: 2582 EGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Query: 351 PHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQ 410
S ++ S S SSS S +S +TT E + + + P A P Q
Sbjct: 2642 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTT--DEDSSCSSDDEAAP---APTAGPSAQ 2696
Query: 411 LSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSP 443
+L K+ Q + SP PQ+P
Sbjct: 2697 AALPTKATKQAGKARPSAHSPGKKTPAPQPQAP 2729
Score = 30.4 bits (67), Expect = 4.9
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 21/178 (11%)
Query: 296 QEKGLTLGVETCGSKGNAEKSMS----ATEKQERTVMSHGCENFNTRDSVTGKESQGERP 351
QE G L E G+ + +K+ + A E + + S G + ++ S +G E++GE
Sbjct: 2527 QEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEE 2586
Query: 352 --------------HLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCV 397
+ S R + S S SSS S +S +++ + + + +
Sbjct: 2587 GDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSS---SSSSSSSSSSSS 2643
Query: 398 PDVKALMESPEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKT 455
+ S S S S +S T + CS+ +P +A A T
Sbjct: 2644 SSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPT 2701
>gi|7662208 GTPase regulator associated with the focal adhesion
kinase pp125 isoform a [Homo sapiens]
Length = 814
Score = 32.3 bits (72), Expect = 1.3
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 346 SQGERPHLSLFIPRETTY---QFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCV-PDVK 401
S ERP L+LF ++T Q +S+ SS +S++S + L + N N PD+
Sbjct: 595 SCSERP-LTLFHTVQSTEKQEQRNSIINSSLESVSSNPNSILNSSSSLQPNMNSSDPDLA 653
Query: 402 ALMESPEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMG 461
+ + L P S S P+ SA P SP + ++ +RS G
Sbjct: 654 VVKPTRPNSLPPNPSPTSPLSPSW-----PMFSA----PSSPMPTSSTSSDSSPVRSVAG 704
Query: 462 LEWF 465
WF
Sbjct: 705 FVWF 708
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 32.3 bits (72), Expect = 1.3
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 33 PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
PTIPT++ ++ T+P K K I ++ + TE S+ E+ +
Sbjct: 591 PTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650
Query: 93 FPLPAVGLER--AATTKADKDIKNPIQPSFK--------MLKNTKPMTTFQE---ETKAQ 139
P V E T + ++ P+ P+ K + KP + +E T+
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710
Query: 140 FYASEK-TSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQ 198
+ EK T P + KS S P+ + + +P++S + T P +
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE----KPTTPTEKP 766
Query: 199 TTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHL 258
T S + KL I ++ + + +PT IS + + + T +S E+ S +
Sbjct: 767 TISPE-KL-TIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTE--ETTISTEKPSIPMEKP 822
Query: 259 SGVPTDVTVTETPEK--NTESLILSLKMSSL 287
+ +PT+ T T E +TE L + ++ ++
Sbjct: 823 T-LPTEETTTSVEETTISTEKLTIPMEKPTI 852
Score = 30.0 bits (66), Expect = 6.5
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 18/166 (10%)
Query: 33 PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
PTIP ++ ++ T+P K P K I + + TE K + E T+ T
Sbjct: 885 PTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTE------KPTIPTEETTIST 938
Query: 93 FPL------PAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKT 146
L P + E+ T +K + +P+ K T P T+ +EK
Sbjct: 939 EKLTIPTEKPTISPEK-LTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKL 997
Query: 147 SPKR-----ELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDR 187
+ R A L S PS S+++G+ S S+ +R
Sbjct: 998 TALRPPHPSPTATGLAALVMSPHAPSTPMTSVILGTTTTSRSSTER 1043
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 32.3 bits (72), Expect = 1.3
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 25/271 (9%)
Query: 33 PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
PTIPT++ ++ T+P K K I ++ + TE S+ E+ +
Sbjct: 591 PTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650
Query: 93 FPLPAVGLER--AATTKADKDIKNPIQPSFK--------MLKNTKPMTTFQE---ETKAQ 139
P V E T + ++ P+ P+ K + KP + +E T+
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710
Query: 140 FYASEK-TSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQ 198
+ EK T P + KS S P+ + + +P++S + T P +
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE----KPTTPTEKP 766
Query: 199 TTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHL 258
T S + KL I ++ + + +PT IS + + + T +S E+ S +
Sbjct: 767 TISPE-KL-TIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTE--ETTISTEKPSIPMEKP 822
Query: 259 SGVPTDVTVTETPEK--NTESLILSLKMSSL 287
+ +PT+ T T E +TE L + ++ ++
Sbjct: 823 T-LPTEETTTSVEETTISTEKLTIPMEKPTI 852
Score = 30.0 bits (66), Expect = 6.5
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 18/166 (10%)
Query: 33 PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
PTIP ++ ++ T+P K P K I + + TE K + E T+ T
Sbjct: 885 PTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTE------KPTIPTEETTIST 938
Query: 93 FPL------PAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKT 146
L P + E+ T +K + +P+ K T P T+ +EK
Sbjct: 939 EKLTIPTEKPTISPEK-LTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKL 997
Query: 147 SPKR-----ELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDR 187
+ R A L S PS S+++G+ S S+ +R
Sbjct: 998 TALRPPHPSPTATGLAALVMSPHAPSTPMTSVILGTTTTSRSSTER 1043
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 32.0 bits (71), Expect = 1.7
Identities = 83/400 (20%), Positives = 146/400 (36%), Gaps = 59/400 (14%)
Query: 72 TENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTT 131
TEN ER + T P PA E TT +K +P++P+ +N + TT
Sbjct: 442 TENRERTAN---------ENTTPSPAGPTENRETTANEKTTLSPVEPT----ENRE--TT 486
Query: 132 FQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGS-------IEPSLSN 184
E+T + + A + K+ S P+E G + + EP+ +
Sbjct: 487 ANEKTTPSPAEPTENGQRTPFANE--KTTSSSAEPTEHGERTPLANENTTPSPAEPTENR 544
Query: 185 QDRKYSSTLPNDVQ-TTSGD---LKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
+ T P+ + T +GD L +K P E P + + +
Sbjct: 545 ERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEH 604
Query: 241 RVRTLLSNE-------RDSKGRDHLSGVPTDVTVTETPEKNTESLILSL-KMSSLGKIQV 292
RT L+NE ++ R+ + T T +P TE+ ++ + ++L +
Sbjct: 605 EERTPLANENTTPSPAEPTENRERTANENT----TPSPAGPTENREMTANEKTTLFPAEP 660
Query: 293 MEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPH 352
E +E+ T +T S TE +RT + N T S GER
Sbjct: 661 TENRER--TANEKTTSSPA------EPTENGQRTPFA----NEKTTSSSAEPTEHGERTP 708
Query: 353 LSLFIPRETTYQFHSVSQSSSQSLASLATTF---LQEKKAEAQNHNCVPDVKALMESPE- 408
L+ TT +++ ++ T F E + N N P E+ +
Sbjct: 709 LA---NENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDR 765
Query: 409 GQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHA 448
L+ E + S + + G ++P + + + + T HA
Sbjct: 766 TPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHA 805
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,819,022
Number of Sequences: 37866
Number of extensions: 1173873
Number of successful extensions: 3067
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 2972
Number of HSP's gapped (non-prelim): 163
length of query: 609
length of database: 18,247,518
effective HSP length: 108
effective length of query: 501
effective length of database: 14,157,990
effective search space: 7093152990
effective search space used: 7093152990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.