Guide to the Human Genome
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Search of human proteins with 21361664

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361664 lung cancer-related protein 8 isoform a [Homo
sapiens]
         (609 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens]   1234   0.0  
gi|154800469 lung cancer-related protein 8 isoform c [Homo sapiens]  1163   0.0  
gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens]  1150   0.0  
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     39   0.014
gi|4757812 ATP synthase, H+ transporting, mitochondrial F0 compl...    38   0.031
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          37   0.040
gi|51479129 ATP synthase, H+ transporting, mitochondrial F0 comp...    37   0.069
gi|4557719 DNA ligase I [Homo sapiens]                                 35   0.15 
gi|65506891 solute carrier family 3, member 2 isoform c [Homo sa...    35   0.20 
gi|209969819 hypothetical protein LOC253143 [Homo sapiens]             35   0.20 
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s...    35   0.26 
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s...    35   0.26 
gi|61744479 solute carrier family 3, member 2 isoform d [Homo sa...    34   0.34 
gi|109637791 transcription factor-like nuclear regulator [Homo s...    34   0.34 
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s...    34   0.45 
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s...    34   0.45 
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    34   0.45 
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]       33   0.58 
gi|223555917 metadherin [Homo sapiens]                                 33   0.76 
gi|109637761 calpastatin isoform g [Homo sapiens]                      33   0.76 
gi|109637753 calpastatin isoform a [Homo sapiens]                      33   0.76 
gi|55770834 centromere protein F [Homo sapiens]                        33   0.76 
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]              33   0.76 
gi|21493045 A-kinase anchor protein 6 [Homo sapiens]                   33   1.00 
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        33   1.00 
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         32   1.3  
gi|7662208 GTPase regulator associated with the focal adhesion k...    32   1.3  
gi|16554449 zonadhesin isoform 3 [Homo sapiens]                        32   1.3  
gi|27881494 zonadhesin isoform 6 [Homo sapiens]                        32   1.3  
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    32   1.7  

>gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens]
          Length = 609

 Score = 1234 bits (3194), Expect = 0.0
 Identities = 609/609 (100%), Positives = 609/609 (100%)

Query: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
           MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60

Query: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
           DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120

Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
           KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180

Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
           SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240

Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
           RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300

Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
           TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360

Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
           TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420

Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
           FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480

Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
           KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540

Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600
           GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
Sbjct: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600

Query: 601 DCRSKTCLD 609
           DCRSKTCLD
Sbjct: 601 DCRSKTCLD 609


>gi|154800469 lung cancer-related protein 8 isoform c [Homo sapiens]
          Length = 583

 Score = 1163 bits (3009), Expect = 0.0
 Identities = 577/577 (100%), Positives = 577/577 (100%)

Query: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
           MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60

Query: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
           DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120

Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
           KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180

Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
           SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240

Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
           RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300

Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
           TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360

Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
           TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420

Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
           FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480

Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
           KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540

Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK 577
           GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK
Sbjct: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLK 577


>gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens]
          Length = 573

 Score = 1150 bits (2974), Expect = 0.0
 Identities = 573/609 (94%), Positives = 573/609 (94%), Gaps = 36/609 (5%)

Query: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60
           MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
Sbjct: 1   MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK 60

Query: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120
           DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
Sbjct: 61  DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF 120

Query: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180
           KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
Sbjct: 121 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP 180

Query: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
           SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
Sbjct: 181 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240

Query: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300
           RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
Sbjct: 241 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL 300

Query: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360
           TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
Sbjct: 301 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE 360

Query: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420
           TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
Sbjct: 361 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ 420

Query: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480
           FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
Sbjct: 421 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG 480

Query: 481 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK 540
           KPQCWNAMTQKPQLISPQGERLSQ                                    
Sbjct: 481 KPQCWNAMTQKPQLISPQGERLSQ------------------------------------ 504

Query: 541 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 600
           GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
Sbjct: 505 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG 564

Query: 601 DCRSKTCLD 609
           DCRSKTCLD
Sbjct: 565 DCRSKTCLD 573


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 11/226 (4%)

Query: 53   KKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDI 112
            +K K P+K+  KA  KE+  + E ++     +KP++     P      E+A  T   ++ 
Sbjct: 797  EKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEK 856

Query: 113  KNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGAS 172
            K+  +      +  KP    ++E   +     K   K+E A+D     + +    E  A 
Sbjct: 857  KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAED-----KKKVPTPEKEAP 911

Query: 173  LLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDKID--PQRQELLVKLLDVPTGDCHI 230
              V   E +   +  + +   P+D +        +K +  P++++   +    P      
Sbjct: 912  AKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKP----EE 967

Query: 231  SPKNVSDGVKRVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTE 276
             PK  +   +  +TL       K         TD   ++ PEK TE
Sbjct: 968  KPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATE 1013



 Score = 38.5 bits (88), Expect = 0.018
 Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 15/221 (6%)

Query: 4   NPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIKDLI 63
           +PP  E       P K  KS +           + +K     PA +   +K K P K+  
Sbjct: 503 SPPAEEAA----SPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA 558

Query: 64  KAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKML 123
           K+  +    E EE  S   V  PE+        A   +  A  K+ +  K+P++   K  
Sbjct: 559 KSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA---KSPAEAKSPEKAKSPVKEEAKSP 615

Query: 124 KNTKPMTTFQEETKAQFYASEKT-SPKRELAKDLPKS----GESRCNPSEAGASLLVGSI 178
              K     + ++ A+  + EK  SP +E AK   K+     E   +P +A + +   + 
Sbjct: 616 AEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAK 675

Query: 179 EPSLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVK 219
            P  +    K  +  P   +     +K +   P++ +  VK
Sbjct: 676 SPEKAKSPVKAEAKSP---EKAKSPVKEEAKSPEKAKSPVK 713



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)

Query: 53  KKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPL-------PAVGLERAAT 105
           +K K P+K+  K   K      EE  S      PE+  KT  +       PA    R+  
Sbjct: 720 EKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEK-AKTLDVKSPEAKTPAKEEARSPA 778

Query: 106 TKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGE 161
            K  +  K+P++   K  +  K  +  +E+ K    A EK  PK+E  K   K  E
Sbjct: 779 DKFPEKAKSPVKEEVKSPEKAK--SPLKEDAK----APEKEIPKKEEVKSPVKEEE 828


>gi|4757812 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit F2 isoform 2a [Homo sapiens]
          Length = 94

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 499 GERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQKGWIRCNT---TIRKSGFG 555
           GE  + V + ++    ++  E P+ +   +FS   + GA Q+G+ R       ++K    
Sbjct: 5   GECPAPVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSIS 64

Query: 556 GITMLFTGYFVLCCSWSFRRLK 577
           GITM+   Y +   S+S++ LK
Sbjct: 65  GITMVLACYVLFSYSFSYKHLK 86


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 36  PTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPL 95
           P D+K  + KP      K+ K PIK   K K +E++ E ++   K    +P++ VK    
Sbjct: 646 PEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETP 705

Query: 96  P---AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSPKREL 152
           P      +++    +  K+ K P +   K+ K+ K  +T   E K       K   K E 
Sbjct: 706 PKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEES 765

Query: 153 AKDLPKSGESRCNPSEAG 170
            K   K   +   P E G
Sbjct: 766 VK---KDSVAAGKPKEKG 780



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 67/315 (21%), Positives = 118/315 (37%), Gaps = 49/315 (15%)

Query: 37  TDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLP 96
           TD K   +K  T+ +  K+K            E + E +E+  K V  K ++T      P
Sbjct: 626 TDVKPKAAKEKTVKKETKVK-----------PEDKKEEKEKPKKEVAKKEDKT------P 668

Query: 97  AVGLERAATTKADKDIKNPI------QPSFKMLKNTKPMTTFQEETKAQ--FYASEKTSP 148
               E+    +  K++K  I      +P  ++ K T P    +E  K +      E+  P
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEP 728

Query: 149 KRELAKDLPKSGESRCNP-SEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLD 207
           K+E+ K LPK  +    P SEA     +    P      +K S       +   G +K+ 
Sbjct: 729 KKEI-KKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKE--KGKIKVI 785

Query: 208 KIDPQRQELLVKLLD---------VPTGDCHISPKNVSDGVKRVRTLLSNERD-SKGRDH 257
           K + +  E +   +             G   I P   +  ++  R+L+S+  D +K  + 
Sbjct: 786 KKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGP---AKELEAERSLMSSPEDLTKDFEE 842

Query: 258 LSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQE-------KGLTLGVETCGSK 310
           L     DVT    P+         LK +   +  V++K+        +    G+ T   +
Sbjct: 843 LKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKEREVTKGPAESPDEGITTTEGE 902

Query: 311 GNAEKSMSATEKQER 325
           G  E++    E  E+
Sbjct: 903 GECEQTPEELEPVEK 917


>gi|51479129 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit F2 isoform 2b [Homo sapiens]
          Length = 88

 Score = 36.6 bits (83), Expect = 0.069
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 503 SQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQKGWIRCNT---TIRKSGFGGITM 559
           S V + ++    ++  E P+ +   +FS   + GA Q+G+ R       ++K    GITM
Sbjct: 3   SVVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITM 62

Query: 560 LFTGYFVLCCSWSFRRLK 577
           +   Y +   S+S++ LK
Sbjct: 63  VLACYVLFSYSFSYKHLK 80


>gi|4557719 DNA ligase I [Homo sapiens]
          Length = 919

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 20/149 (13%)

Query: 28  CKMIGPTIP----------TDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEER 77
           C  + P  P          +D     S P+ +P+ +  +  +      +  E ++E+E+R
Sbjct: 87  CSQVSPPRPATSPENNASLSDTSPMDSSPSGIPKRRTARKQLPKRTIQEVLEEQSEDEDR 146

Query: 78  NSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETK 137
            +K    K E+  +  P  ++     AT K  +D   P  P        KP+ T + ET 
Sbjct: 147 EAK---RKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTP-------PKPLKTSKAETP 196

Query: 138 AQFYASEKTSPKRELAKDLPKSGESRCNP 166
            +  +  + + K+EL ++  ++   R  P
Sbjct: 197 TESVSEPEVATKQELQEEEEQTKPPRRAP 225


>gi|65506891 solute carrier family 3, member 2 isoform c [Homo
           sapiens]
          Length = 630

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 19/82 (23%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 135 ETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLP 194
           +T  +  AS    P      ++ ++G S C  ++AG  LL  S  P+L++++ + + T+ 
Sbjct: 46  QTGLELLASGDPLPSASQNAEMIETG-SDC-VTQAGLQLLASSDPPALASKNAEVTGTMS 103

Query: 195 NDVQTTSGDLKLDKIDPQRQEL 216
            D +    +++L++++P++Q +
Sbjct: 104 QDTEVDMKEVELNELEPEKQPM 125


>gi|209969819 hypothetical protein LOC253143 [Homo sapiens]
          Length = 2151

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 21/136 (15%)

Query: 305  ETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRETTYQ 364
            + C S+G + K M +++++E     HG  N N +D +    S G    L    P++   +
Sbjct: 980  DECKSEGQSAKEMLSSDQRETVTEPHGEVNHNQKDLLV---SSGSNNSLPCGSPKKCNLK 1036

Query: 365  FHSVSQS----SSQSLASLATTFLQEKKAEAQNHNCVPDVKA--LMESPEGQLSLEPKSD 418
               V  S    S++ +  +  T    K AE      V DVKA  L++    Q  L  + D
Sbjct: 1037 GAFVKMSGCDESTEGMVDIVYTDCSNKLAEG-----VLDVKASNLLDCGARQEKLAFQED 1091

Query: 419  S-------QFQASHTG 427
            S       +  A+HTG
Sbjct: 1092 SRSTLSRRELDAAHTG 1107


>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
           sapiens]
          Length = 634

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 15/216 (6%)

Query: 143 SEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSG 202
           SEKT P  E A+D  ++ E+      A A  L  S  P    + +   S +P    T   
Sbjct: 126 SEKTPPLEEQAEDKKENTENHSETPAAPA--LPPSAPPKPRPKPKPKKSPVPPKGATAGA 183

Query: 203 DLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLSGVP 262
             K D++ P ++         P       PK  S    R     S+ + + G    S  P
Sbjct: 184 SHKGDEVPPIKKNTKAPGKQAPVP----PPKPASRNTTREAAGSSHSKKTTG-SKASASP 238

Query: 263 TDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
           +  + +  P+ + E+  +S K  ++G  +   K +K      +   S  +++ + S T  
Sbjct: 239 STSSTSSRPKASKET--VSSKAGTVGTTKGKRKTDK------QPITSHLSSDTTTSGTSD 290

Query: 323 QERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIP 358
            +        E+F    +V G E Q      S+  P
Sbjct: 291 LKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPP 326



 Score = 30.0 bits (66), Expect = 6.5
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 17/193 (8%)

Query: 283 KMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVT 342
           K+S++GKI    K  K  T   +   +    E+ +S  + +E  +     +    +D   
Sbjct: 33  KLSTIGKIFKPWKWRKKKTSD-KFRETSAVLERKISTRQSREELIRRGVLKELPDQDGDV 91

Query: 343 GKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQE----KKAEAQNHNCVP 398
               +    H+ + I  E+T + + V         S  T  L+E    KK   +NH+  P
Sbjct: 92  TVNFENSNGHM-IPIGEESTREENVVKSEEGNGSVSEKTPPLEEQAEDKKENTENHSETP 150

Query: 399 DVKALMES--------PEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTP--QSPFTNHA 448
              AL  S        P+ + S  P   +   ASH G + P        P  Q+P     
Sbjct: 151 AAPALPPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAP-VPPP 209

Query: 449 AAAGRKTLRSCMG 461
             A R T R   G
Sbjct: 210 KPASRNTTREAAG 222


>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
           sapiens]
          Length = 645

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 15/216 (6%)

Query: 143 SEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSG 202
           SEKT P  E A+D  ++ E+      A A  L  S  P    + +   S +P    T   
Sbjct: 137 SEKTPPLEEQAEDKKENTENHSETPAAPA--LPPSAPPKPRPKPKPKKSPVPPKGATAGA 194

Query: 203 DLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLSGVP 262
             K D++ P ++         P       PK  S    R     S+ + + G    S  P
Sbjct: 195 SHKGDEVPPIKKNTKAPGKQAPVP----PPKPASRNTTREAAGSSHSKKTTG-SKASASP 249

Query: 263 TDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
           +  + +  P+ + E+  +S K  ++G  +   K +K      +   S  +++ + S T  
Sbjct: 250 STSSTSSRPKASKET--VSSKAGTVGTTKGKRKTDK------QPITSHLSSDTTTSGTSD 301

Query: 323 QERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIP 358
            +        E+F    +V G E Q      S+  P
Sbjct: 302 LKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPP 337



 Score = 30.0 bits (66), Expect = 6.5
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 17/193 (8%)

Query: 283 KMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVT 342
           K+S++GKI    K  K  T   +   +    E+ +S  + +E  +     +    +D   
Sbjct: 44  KLSTIGKIFKPWKWRKKKTSD-KFRETSAVLERKISTRQSREELIRRGVLKELPDQDGDV 102

Query: 343 GKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQE----KKAEAQNHNCVP 398
               +    H+ + I  E+T + + V         S  T  L+E    KK   +NH+  P
Sbjct: 103 TVNFENSNGHM-IPIGEESTREENVVKSEEGNGSVSEKTPPLEEQAEDKKENTENHSETP 161

Query: 399 DVKALMES--------PEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTP--QSPFTNHA 448
              AL  S        P+ + S  P   +   ASH G + P        P  Q+P     
Sbjct: 162 AAPALPPSAPPKPRPKPKPKKSPVPPKGATAGASHKGDEVPPIKKNTKAPGKQAP-VPPP 220

Query: 449 AAAGRKTLRSCMG 461
             A R T R   G
Sbjct: 221 KPASRNTTREAAG 233


>gi|61744479 solute carrier family 3, member 2 isoform d [Homo
           sapiens]
          Length = 599

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 12/50 (24%), Positives = 33/50 (66%)

Query: 167 SEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQEL 216
           ++AG  LL  S  P+L++++ + + T+  D +    +++L++++P++Q +
Sbjct: 45  TQAGLQLLASSDPPALASKNAEVTGTMSQDTEVDMKEVELNELEPEKQPM 94


>gi|109637791 transcription factor-like nuclear regulator [Homo
            sapiens]
          Length = 2624

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 39/302 (12%)

Query: 110  KDIKNPIQPSFKMLKNTKPMTTFQEETKA---QFYASEKT----SPKRELAKDLPKSGES 162
            ++ +  I P    L+  KP+   Q + KA   +    EKT        E+ KDL ++G  
Sbjct: 1092 EETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEEIDKDLEETGRR 1151

Query: 163  RCNPSEAGASLL--VGSIEPSLSNQDRKYSS-TLPNDVQTTSGDLKLDKIDPQRQELLVK 219
              +P E G   +  V  +E  L    R+ SS     +V   +  ++ D  + +R+     
Sbjct: 1152 EISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDLEETERE----- 1206

Query: 220  LLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSK-------GRDHLSGVPTDVTVTETPE 272
                      ISP+   +G + V+ +   E D K        R+ +    + +   E   
Sbjct: 1207 ----------ISPQ--ENGPEEVKPVGKMETDLKEIREEISQREKVLAEFSAIREKEIDL 1254

Query: 273  KNTESLILSLKMSSLGKIQVMEKQEKGL-TLGVETCGSKGNAEKSMSATEKQERTVMSHG 331
            K T    + +     GK+ V+E+ E  L   G E    +G+ E  +  TE++   +   G
Sbjct: 1255 KETGKRDIPIMEKVSGKMAVVEEMEADLKETGKENFRERGSEE--ICVTEEKVAELKQTG 1312

Query: 332  CENFNTRDSVTGKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEA 391
              + + R++   + S   +    L   +  +  F +V     Q+++S   + +     E 
Sbjct: 1313 KTDISPRENELEETSTSRQTDTHLM--QSGSNDFSAVPSLDIQNISSEVLSMMHTPVEEK 1370

Query: 392  QN 393
            +N
Sbjct: 1371 RN 1372



 Score = 33.9 bits (76), Expect = 0.45
 Identities = 71/344 (20%), Positives = 142/344 (41%), Gaps = 36/344 (10%)

Query: 5    PPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIKDLIK 64
            P  ++  P+ +  FKR K +L    +   T  +++ +Y+ K  T    KKM+  +     
Sbjct: 1425 PLEIKPAPFVRSRFKRPKPNLARAALKRETTESEKYIYEKKSET----KKMETIVMQENN 1480

Query: 65   AKGKELETENEERNSKLVVDKPEQTV-----KTFPLPAVGLERAATTKADKDIKN----- 114
             +   L ++++E  + L++ + + T+     +   LP    ER  +     + K      
Sbjct: 1481 EQTDTLPSQHDE--ASLMISREKDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEESQSA 1538

Query: 115  PIQPSFKMLK-NTKPMTTFQEETKAQFY--ASEKTSPKRELAKDLPKSGESR-CNPSEAG 170
            P+Q +  ++   T  + TFQ+E K      A +     +    ++ K+G+ +  +  EA 
Sbjct: 1539 PVQKNDSVVSVGTNNVNTFQQEMKESVIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAK 1598

Query: 171  ASLLVGSIEPSLSNQDRKY----SSTLPNDVQTTSGDLKLDKI-DPQRQELLVKLLDVPT 225
              +  G         ++K     +S +  +++  S  +   ++ + Q Q +LV+ L V  
Sbjct: 1599 GIIKEGRTILPKDETEKKVLTVSNSQIETEIEVPSSAVPEHRMYENQSQVVLVENLHVNK 1658

Query: 226  GDCHISPKN---VSDGVKRVRTLLSNERDSKGRDHL---SGVPTDVTVTETPEKNTESLI 279
             +  I  +N   V    +  R      + + GR H      V   VT  ++ E   E  +
Sbjct: 1659 TNETIRHENKPYVPSSAQMTRRKFQKAKPNLGRAHSKKEEPVLEKVTTDQSKEGKPEDHL 1718

Query: 280  LSLKMSSLGKIQVMEKQEKGLTLGV----ETCGSKGNAEKSMSA 319
            L  K +S  ++ + EK E   +L V    +  GSK +A   + A
Sbjct: 1719 LQ-KGASNTQLLLKEKAELLTSLEVSARKDCVGSKESALAKIDA 1761


>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
            sapiens]
          Length = 1719

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 184  NQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVR 243
            N  R+YS  +P + +       L   DP+ +    KL+  PT   HI+     DG++ ++
Sbjct: 1526 NNKRRYSFRVPEEERMQQRREMLR--DPEMRN---KLISNPTNFNHIAHMGPGDGIQILK 1580

Query: 244  TLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQ 291
             L  N R  + R   SG  +  ++T++  +   S+  S  +S+    Q
Sbjct: 1581 DLPMNPRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQ 1628


>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
            sapiens]
          Length = 1638

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 184  NQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVR 243
            N  R+YS  +P + +       L   DP+ +    KL+  PT   HI+     DG++ ++
Sbjct: 1445 NNKRRYSFRVPEEERMQQRREMLR--DPEMRN---KLISNPTNFNHIAHMGPGDGIQILK 1499

Query: 244  TLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQ 291
             L  N R  + R   SG  +  ++T++  +   S+  S  +S+    Q
Sbjct: 1500 DLPMNPRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQ 1547


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 15/207 (7%)

Query: 22   KSHLPYCKMIGPTIPTDQKVYQSKPAT-LPRAKKMKGPIKDLIKAKGKELETENEERNSK 80
            +S + + +   P +   Q    + P T LPR    KG I + +K K + L+ E +    +
Sbjct: 2003 QSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGIILEEMKVKSENLKEEPQSSEEE 2062

Query: 81   LVVDKPEQT-VKTFPL-PAVGLERAATTKADKDIKNPIQPSFKMLK-NTKPMTTFQEETK 137
             +     +T +K+ P+ P  G+   AT   D+      +   +M+   T+P+T      K
Sbjct: 2063 SMSSVETRTLIKSEPVSPKNGVLPQAT--GDQKSGGKCETDRRMVAARTEPLTPNPASKK 2120

Query: 138  AQFY--ASEKTSPKRE-------LAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRK 188
             + +   SE +S            ++    S  S C+ S +G+S    S   S S+    
Sbjct: 2121 PRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSS 2180

Query: 189  YSSTLPNDVQTTSGDLKLDKIDPQRQE 215
             +S+  +   ++S +   D+ + Q++E
Sbjct: 2181 STSSSSSSSSSSSEESDSDEEEAQKRE 2207


>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
          Length = 1136

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 26/140 (18%)

Query: 207  DKIDPQRQELLVKLLDVPTGDCHISP--KNVSDGVKRVRTLLSNERDSKGRDHLSGVPTD 264
            D+   QR E++V++  +  G+  + P  +  +DG +  R ++SN+ DS   +        
Sbjct: 986  DESSNQRAEVVVQVPYLEAGEAVVYPLQEAAADGCRESR-VVSNDSDSDLEE-------- 1036

Query: 265  VTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEKQE 324
                         L+ S + S+LG +  +E+Q+   +L V + GS   +E+ + AT +++
Sbjct: 1037 ----------ASELLSSSEASALGHLSFLEQQQSEASLEVAS-GSHSGSEEQLEATARED 1085

Query: 325  RTVMSHG----CENFNTRDS 340
                  G       FNT  S
Sbjct: 1086 GDGDEDGPAQQLSGFNTNQS 1105


>gi|223555917 metadherin [Homo sapiens]
          Length = 582

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 23/165 (13%)

Query: 35  IPTDQKVY----QSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTV 90
           IP DQKV     +     LP  K  K   K   + +      + EE   ++  D P  T 
Sbjct: 419 IPDDQKVSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSTAQDTEELEKEIREDLPVNTS 478

Query: 91  KTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQ----FYASEKT 146
           KT P           + +D        P+  ++KN++P+ T    T  +       S+  
Sbjct: 479 KTRPKQEKAFSLKTISTSD--------PAEVLVKNSQPIKTLPPATSTEPSVILSKSDSD 530

Query: 147 SPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSS 191
               ++   L ++ +S+ N  +        S+ PS +  +  + S
Sbjct: 531 KSSSQVPPILQETDKSKSNTKQ-------NSVPPSQTKSETSWES 568


>gi|109637761 calpastatin isoform g [Homo sapiens]
          Length = 772

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 11/180 (6%)

Query: 83  VDKPEQTVKTFPLP--AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQF 140
           + +P Q     P P  A    R     ++K  ++P +P  K   + K   +      ++ 
Sbjct: 1   MSQPGQKPAASPRPRRAAAARRTHEHVSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRT 60

Query: 141 YASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIE-PSLSNQDRKYSSTLPNDVQT 199
           YA    S  +  A     S  S  NP+E  A  +   +E P L N+ +     +  + + 
Sbjct: 61  YAGGTASATKVSASSGATSKSSSMNPTETKAIPVSQQMEGPHLPNKKKHKKQAVKTEPEK 120

Query: 200 TSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHLS 259
            S   K   +  Q         D  + D H + K VS   ++  +  S E  +K +D +S
Sbjct: 121 KSQSTKPKSLPKQAS-------DTGSNDAH-NKKAVSRSAEQQPSEKSTEPKTKPQDMIS 172


>gi|109637753 calpastatin isoform a [Homo sapiens]
          Length = 791

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 16/192 (8%)

Query: 83  VDKPEQTVKTFPLP--AVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQF 140
           + +P Q     P P  A    R     ++K  ++P +P  K   + K   +      ++ 
Sbjct: 1   MSQPGQKPAASPRPRRAAAARRTHEHVSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRT 60

Query: 141 YASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIE-PSLSNQDRKYSSTLPNDVQT 199
           YA    S  +  A     S  S  NP+E  A  +   +E P L N+ +     +  + + 
Sbjct: 61  YAGGTASATKVSASSGATSKSSSMNPTETKAIPVSQQMEGPHLPNKKKHKKQAVKTEPEK 120

Query: 200 TSGDLKLDKIDPQRQE------------LLVKLLDVPTGDCHISPKNVSDGVKRVRTLLS 247
            S   KL  +  ++ +            L  +  D  + D H + K VS   ++  +  S
Sbjct: 121 KSQSTKLSVVHEKKSQEGKPKEHTEPKSLPKQASDTGSNDAH-NKKAVSRSAEQQPSEKS 179

Query: 248 NERDSKGRDHLS 259
            E  +K +D +S
Sbjct: 180 TEPKTKPQDMIS 191


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 40/293 (13%)

Query: 59   IKDLIKAKGKELETENEERNSKLVVDKPEQTVKTF--------PLPAVGLERAATTKADK 110
            ++DL+K+K   L T  + + S L  D+      +F         +P+   E     +AD+
Sbjct: 763  LRDLLKSKDASLVTNEDHQRSLLAFDQQPAMHHSFANIIGEQGSMPSERSE--CRLEADQ 820

Query: 111  DIKNPIQPSFKMLKNTKPMTTFQEETKAQF------YASEKTSPKRELAKDLPKSGESRC 164
              KN       +L+N      F  E++ Q          E    K E+ ++L K+ E   
Sbjct: 821  SPKNS-----AILQNRVDSLEFSLESQKQMNSDLQKQCEELVQIKGEIEENLMKA-EQMH 874

Query: 165  NPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKL--DKIDPQRQEL--LVK- 219
                A  S  +  ++   S      + TL + ++    +L+L  DK++ ++ E+  L K 
Sbjct: 875  QSFVAETSQRISKLQEDTSAHQNVVAETL-SALENKEKELQLLNDKVETEQAEIQELKKS 933

Query: 220  --LLDVPTGDCHISPKNVSDGVKRVRTLLS-NERDSKGRDHLSGVPTDVTVTETPEK--- 273
              LL+    +  +  + +S   K + +++S N+R+ +     +G   ++  +   EK   
Sbjct: 934  NHLLEDSLKELQLLSETLSLEKKEMSSIISLNKREIEELTQENGTLKEINASLNQEKMNL 993

Query: 274  --NTESL--ILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATEK 322
               +ES    +  +  S+ ++    KQEK + L  + C   GNA + +S   K
Sbjct: 994  IQKSESFANYIDEREKSISELSDQYKQEKLILL--QRCEETGNAYEDLSQKYK 1044


>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
          Length = 1834

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 28/166 (16%)

Query: 6   PRMEVCPYCKKPFKRLK---SHLPYCKM---IGP-------TIPTDQKVYQSKPATL--- 49
           P++  CP C KPF  LK   SHL  C +   +GP        + T Q    S P      
Sbjct: 331 PQIPECPICGKPFLTLKSRTSHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFS 390

Query: 50  --PRAKKMKGPIKDLIKAKGKEL-ETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATT 106
              R  K +GP       K +++ E  +E+    + + + E       +PA+ LE A + 
Sbjct: 391 DHSRGLKRRGPTSKKEPRKRRKVDEAPSEDLLVAMALSRSEMEPGA-AVPALRLESAFSE 449

Query: 107 KADKDIKN-------PIQPSFKMLKNTKPMTTFQEETKAQFYASEK 145
           +   + +N       P+ P   ++++++  T  Q E +     SE+
Sbjct: 450 RIRPEAENKSRKKKPPVSPPLLLVQDSE-TTGRQIEDRVALLLSEE 494


>gi|21493045 A-kinase anchor protein 6 [Homo sapiens]
          Length = 2319

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 34  TIPTDQKVYQSKPATLPRAKKMKGPIK---DLIKAKGKELETENEERNSKLVVDKP--EQ 88
           T P D   Y       P   +  G +    D I   G E  TE   + S  V DK   E+
Sbjct: 250 TKPFDSWSYSEMEKEFPELIRSVGLLTVAADSISTNGSEAVTEEVSQVSLSVDDKGGCEE 309

Query: 89  TVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKTSP 148
              +      GL    ++ + + + N  QPS + ++     ++  +    Q    E  +P
Sbjct: 310 DNASAVEEQPGLTLGVSSSSGEALTNAAQPSSETVQQESSSSSHHDAKNQQPVPCENATP 369

Query: 149 KRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQTTSGDLKLDK 208
           KR +      + +S   P+     L +                T  ND++   G  ++  
Sbjct: 370 KRTIRDCFNYNEDSPTQPTLPKRGLFL-------------KEETFKNDLKGNGGKRQMVD 416

Query: 209 IDPQRQELLVKLLDVP 224
           + P+       L+D P
Sbjct: 417 LKPEMSRSTPSLVDPP 432


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 32  GPTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETEN---EERNSKLVVDKPEQ 88
           GPT+P  +K+  S PA     +++   +  +      EL+ E     +    LV+D P+ 
Sbjct: 157 GPTVPYYEKI-NSVPAVDQELQELLEELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQA 215

Query: 89  TVKTFPLPAVGLERAATTKADKD 111
           T+ T P P+V +    +  + K+
Sbjct: 216 TLSTTPKPSVQMSHLESLASSKE 238


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 294  EKQEKGLTLGVETCGSKG---NAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGER 350
            E +E+G   G   CG+ G   +A  S +A+     +  S    + ++  S +   S    
Sbjct: 2582 EGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641

Query: 351  PHLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQ 410
               S      ++    S S SSS S +S +TT   E  + + +    P   A    P  Q
Sbjct: 2642 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTT--DEDSSCSSDDEAAP---APTAGPSAQ 2696

Query: 411  LSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSP 443
             +L  K+  Q   +     SP        PQ+P
Sbjct: 2697 AALPTKATKQAGKARPSAHSPGKKTPAPQPQAP 2729



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 296  QEKGLTLGVETCGSKGNAEKSMS----ATEKQERTVMSHGCENFNTRDSVTGKESQGERP 351
            QE G  L  E  G+  + +K+ +    A E +  +  S G  + ++  S +G E++GE  
Sbjct: 2527 QEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEE 2586

Query: 352  --------------HLSLFIPRETTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCV 397
                          + S    R  +    S S SSS S +S +++      + + + +  
Sbjct: 2587 GDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSS---SSSSSSSSSSSS 2643

Query: 398  PDVKALMESPEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKT 455
                +   S     S    S S   +S T  +   CS+      +P    +A A   T
Sbjct: 2644 SSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPT 2701


>gi|7662208 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform a [Homo sapiens]
          Length = 814

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 346 SQGERPHLSLFIPRETTY---QFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCV-PDVK 401
           S  ERP L+LF   ++T    Q +S+  SS +S++S   + L    +   N N   PD+ 
Sbjct: 595 SCSERP-LTLFHTVQSTEKQEQRNSIINSSLESVSSNPNSILNSSSSLQPNMNSSDPDLA 653

Query: 402 ALMESPEGQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMG 461
            +  +    L   P   S    S      P+ SA    P SP    + ++    +RS  G
Sbjct: 654 VVKPTRPNSLPPNPSPTSPLSPSW-----PMFSA----PSSPMPTSSTSSDSSPVRSVAG 704

Query: 462 LEWF 465
             WF
Sbjct: 705 FVWF 708


>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
          Length = 2812

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 25/271 (9%)

Query: 33  PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
           PTIPT++    ++  T+P  K      K  I ++   + TE     S+      E+   +
Sbjct: 591 PTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650

Query: 93  FPLPAVGLER--AATTKADKDIKNPIQPSFK--------MLKNTKPMTTFQE---ETKAQ 139
              P V  E     T +    ++ P+ P+ K         +   KP  + +E    T+  
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710

Query: 140 FYASEK-TSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQ 198
             + EK T P  +      KS  S   P+       + + +P++S +      T P +  
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE----KPTTPTEKP 766

Query: 199 TTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHL 258
           T S + KL  I  ++  +  +   +PT    IS +  +   +   T +S E+ S   +  
Sbjct: 767 TISPE-KL-TIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTE--ETTISTEKPSIPMEKP 822

Query: 259 SGVPTDVTVTETPEK--NTESLILSLKMSSL 287
           + +PT+ T T   E   +TE L + ++  ++
Sbjct: 823 T-LPTEETTTSVEETTISTEKLTIPMEKPTI 852



 Score = 30.0 bits (66), Expect = 6.5
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 18/166 (10%)

Query: 33   PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
            PTIP ++    ++  T+P  K    P K  I  +   + TE      K  +   E T+ T
Sbjct: 885  PTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTE------KPTIPTEETTIST 938

Query: 93   FPL------PAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKT 146
              L      P +  E+  T   +K   +  +P+    K T P       T+     +EK 
Sbjct: 939  EKLTIPTEKPTISPEK-LTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKL 997

Query: 147  SPKR-----ELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDR 187
            +  R       A  L     S   PS    S+++G+   S S+ +R
Sbjct: 998  TALRPPHPSPTATGLAALVMSPHAPSTPMTSVILGTTTTSRSSTER 1043


>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
          Length = 2721

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 25/271 (9%)

Query: 33  PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
           PTIPT++    ++  T+P  K      K  I ++   + TE     S+      E+   +
Sbjct: 591 PTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650

Query: 93  FPLPAVGLER--AATTKADKDIKNPIQPSFK--------MLKNTKPMTTFQE---ETKAQ 139
              P V  E     T +    ++ P+ P+ K         +   KP  + +E    T+  
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710

Query: 140 FYASEK-TSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDRKYSSTLPNDVQ 198
             + EK T P  +      KS  S   P+       + + +P++S +      T P +  
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPE----KPTTPTEKP 766

Query: 199 TTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVKRVRTLLSNERDSKGRDHL 258
           T S + KL  I  ++  +  +   +PT    IS +  +   +   T +S E+ S   +  
Sbjct: 767 TISPE-KL-TIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTE--ETTISTEKPSIPMEKP 822

Query: 259 SGVPTDVTVTETPEK--NTESLILSLKMSSL 287
           + +PT+ T T   E   +TE L + ++  ++
Sbjct: 823 T-LPTEETTTSVEETTISTEKLTIPMEKPTI 852



 Score = 30.0 bits (66), Expect = 6.5
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 18/166 (10%)

Query: 33   PTIPTDQKVYQSKPATLPRAKKMKGPIKDLIKAKGKELETENEERNSKLVVDKPEQTVKT 92
            PTIP ++    ++  T+P  K    P K  I  +   + TE      K  +   E T+ T
Sbjct: 885  PTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTE------KPTIPTEETTIST 938

Query: 93   FPL------PAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTTFQEETKAQFYASEKT 146
              L      P +  E+  T   +K   +  +P+    K T P       T+     +EK 
Sbjct: 939  EKLTIPTEKPTISPEK-LTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKL 997

Query: 147  SPKR-----ELAKDLPKSGESRCNPSEAGASLLVGSIEPSLSNQDR 187
            +  R       A  L     S   PS    S+++G+   S S+ +R
Sbjct: 998  TALRPPHPSPTATGLAALVMSPHAPSTPMTSVILGTTTTSRSSTER 1043


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 83/400 (20%), Positives = 146/400 (36%), Gaps = 59/400 (14%)

Query: 72  TENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSFKMLKNTKPMTT 131
           TEN ER +            T P PA   E   TT  +K   +P++P+    +N +  TT
Sbjct: 442 TENRERTAN---------ENTTPSPAGPTENRETTANEKTTLSPVEPT----ENRE--TT 486

Query: 132 FQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGS-------IEPSLSN 184
             E+T        +   +   A +  K+  S   P+E G    + +        EP+ + 
Sbjct: 487 ANEKTTPSPAEPTENGQRTPFANE--KTTSSSAEPTEHGERTPLANENTTPSPAEPTENR 544

Query: 185 QDRKYSSTLPNDVQ-TTSGD---LKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK 240
           +      T P+  + T +GD   L  +K  P   E        P  +   +  +      
Sbjct: 545 ERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEH 604

Query: 241 RVRTLLSNE-------RDSKGRDHLSGVPTDVTVTETPEKNTESLILSL-KMSSLGKIQV 292
             RT L+NE         ++ R+  +   T    T +P   TE+  ++  + ++L   + 
Sbjct: 605 EERTPLANENTTPSPAEPTENRERTANENT----TPSPAGPTENREMTANEKTTLFPAEP 660

Query: 293 MEKQEKGLTLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPH 352
            E +E+  T   +T  S          TE  +RT  +    N  T  S       GER  
Sbjct: 661 TENRER--TANEKTTSSPA------EPTENGQRTPFA----NEKTTSSSAEPTEHGERTP 708

Query: 353 LSLFIPRETTYQFHSVSQSSSQSLASLATTF---LQEKKAEAQNHNCVPDVKALMESPE- 408
           L+      TT      +++  ++     T F     E +    N N  P      E+ + 
Sbjct: 709 LA---NENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDR 765

Query: 409 GQLSLEPKSDSQFQASHTGCQSPLCSAQRHTPQSPFTNHA 448
             L+ E  + S  + +  G ++P  + +  +  +  T HA
Sbjct: 766 TPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHA 805


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,819,022
Number of Sequences: 37866
Number of extensions: 1173873
Number of successful extensions: 3067
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 2972
Number of HSP's gapped (non-prelim): 163
length of query: 609
length of database: 18,247,518
effective HSP length: 108
effective length of query: 501
effective length of database: 14,157,990
effective search space: 7093152990
effective search space used: 7093152990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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