Guide to the Human Genome
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Name: SLC3A2 Sequence: fasta or formatted (630aa) NCBI GI: 65506891
Description:

solute carrier family 3, member 2 isoform c

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [661aa] solute carrier family 3, member 2 isoform a
alt prot [631aa] solute carrier family 3, member 2 isoform b
alt prot [599aa] solute carrier family 3, member 2 isoform d
alt prot [568aa] solute carrier family 3, member 2 isoform e
alt prot [529aa] solute carrier family 3, member 2 isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         63           5
 C cysteine            0.6          4           1
 D aspartate           5.9         37           2
 E glutamate           6.5         41           2
 F phenylalanine       3.3         21           1
 G glycine             8.4         53           1
 H histidine           1.6         10           1
 I isoleucine          2.9         18           2
 K lysine              4.6         29           3
 L leucine            14.9         94           4
 M methionine          1.7         11           1
 N asparagine          3.0         19           1
 P proline             5.1         32           2
 Q glutamine           5.1         32           2
 R arginine            3.8         24           2
 S serine              9.8         62           2
 T threonine           4.1         26           1
 V valine              5.1         32           2
 W tryptophan          2.1         13           2
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 3, member 2 isoform c 
SLC3A2                0.987   solute carrier family 3, member 2 isoform a 
SLC3A2                0.949   solute carrier family 3, member 2 isoform b 
SLC3A2                0.938   solute carrier family 3, member 2 isoform d 
SLC3A2                0.864   solute carrier family 3, member 2 isoform e 
SLC3A2                0.841   solute carrier family 3, member 2 isoform f 
SLC3A1                0.082   solute carrier family 3, member 1 
SUGT1                 0.016   suppressor of G2 allele of SKP1 isoform a 
STAP2                 0.016   signal transducing adaptor family member 2 isoform 1...
LOC100294407          0.014   PREDICTED: similar to hCG2039376 
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
PODXL                 0.014   podocalyxin-like isoform 1 precursor 
LOC100132815          0.013   PREDICTED: hypothetical protein 
LOC100132815          0.013   PREDICTED: hypothetical protein 
LOC100132815          0.013   PREDICTED: hypothetical protein 
C14orf178             0.013   hypothetical protein LOC283579 
C15orf40              0.012   hypothetical protein LOC123207 isoform d 
TPCN1                 0.011   two pore segment channel 1 isoform 1 
CHEK2                 0.011   protein kinase CHK2 isoform c 
SULT1C2               0.011   sulfotransferase family, cytosolic, 1C, member 1 iso...
REL                   0.011   v-rel reticuloendotheliosis viral oncogene homolog [H...
USP19                 0.011   ubiquitin thioesterase 19 
CNGA1                 0.010   cyclic nucleotide gated channel alpha 1 isoform 1 [...
LOC100128260          0.009   PREDICTED: hCG_1742852 
LOC100128260          0.009   PREDICTED: hCG_1742852 
LOC100288773          0.009   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.009   PREDICTED: hCG_1742852 
NEK4                  0.008   NIMA-related kinase 4 
C17orf80              0.008   lung cancer-related protein 8 isoform c 
C17orf80              0.008   lung cancer-related protein 8 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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