Guide to the Human Genome
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Name: ZFAND1 Sequence: fasta or formatted (268aa) NCBI GI: 13375985
Description:

zinc finger, AN1-type domain 1

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         18           2
 C cysteine            6.0         16           1
 D aspartate           6.0         16           2
 E glutamate           9.0         24           2
 F phenylalanine       4.1         11           1
 G glycine             4.1         11           2
 H histidine           4.5         12           1
 I isoleucine          5.2         14           2
 K lysine              9.7         26           2
 L leucine             9.0         24           1
 M methionine          1.9          5           1
 N asparagine          3.7         10           2
 P proline             4.1         11           1
 Q glutamine           3.4          9           1
 R arginine            5.2         14           1
 S serine              6.0         16           1
 T threonine           4.5         12           1
 V valine              3.7         10           1
 W tryptophan          1.1          3           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 1 
ZFAND2B               0.098   zinc finger, AN1-type domain 2B 
ZFAND2A               0.096   zinc finger, AN1-type domain 2A 
ZNF260                0.017   zinc finger protein 260 
REST                  0.015   RE1-silencing transcription factor 
RNF31                 0.015   ring finger protein 31 
ZFAND3                0.015   zinc finger, AN1-type domain 3 
CACNA2D3              0.011   calcium channel, voltage-dependent, alpha 2/delta 3 ...
RBAK                  0.011   RB-associated KRAB repressor 
ZFYVE1                0.011   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
TRPS1                 0.009   zinc finger transcription factor TRPS1 
IGHMBP2               0.006   immunoglobulin mu binding protein 2 
ZNF169                0.006   zinc finger protein 169 
ZNF222                0.006   zinc finger protein 222 isoform 1 
ZNF222                0.006   zinc finger protein 222 isoform 2 
KIAA1704              0.006   hypothetical protein LOC55425 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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