Guide to the Human Genome
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Name: UBE2E1 Sequence: fasta or formatted (176aa) NCBI GI: 33359691
Description:

ubiquitin-conjugating enzyme E2E 1 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [193aa] ubiquitin-conjugating enzyme E2E 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          9           1
 C cysteine            2.3          4           1
 D aspartate           5.7         10           3
 E glutamate           4.0          7           1
 F phenylalanine       2.8          5           2
 G glycine             4.5          8           2
 H histidine           1.1          2           1
 I isoleucine          5.7         10           1
 K lysine              8.0         14           3
 L leucine             6.8         12           2
 M methionine          2.3          4           1
 N asparagine          5.1          9           1
 P proline             6.2         11           2
 Q glutamine           2.8          5           2
 R arginine            4.5          8           1
 S serine             14.8         26           8
 T threonine           9.1         16           1
 V valine              4.0          7           1
 W tryptophan          1.7          3           1
 Y tyrosine            3.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2E1                0.967   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E2                0.787   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.754   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.754   ubiquitin-conjugating enzyme E2E 3 
UBE2D2                0.455   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.455   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D1                0.449   ubiquitin-conjugating enzyme E2D 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.449   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D4                0.446   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D2                0.416   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2N                 0.284   ubiquitin-conjugating enzyme E2N 
UBE2K                 0.249   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2A                 0.243   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.243   ubiquitin-conjugating enzyme E2B 
UBE2T                 0.240   ubiquitin-conjugating enzyme E2T 
UBE2NL                0.231   ubiquitin-conjugating enzyme E2N-like 
UBE2L3                0.228   ubiquitin-conjugating enzyme E2L 3 isoform 1 
UBE2K                 0.216   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2I                 0.207   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.207   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.207   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.207   ubiquitin-conjugating enzyme E2I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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