Guide to the Human Genome
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Name: ZNF280D Sequence: fasta or formatted (979aa) NCBI GI: 50811871
Description:

suppressor of hairy wing homolog 4 isoform 1

Referenced in:

DNA Transposon and Retrovirus-related Sequences

Other entries for this name:
alt prot [966aa] suppressor of hairy wing homolog 4 isoform 2
alt prot [158aa] suppressor of hairy wing homolog 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         40           2
 C cysteine            3.6         35           2
 D aspartate           4.0         39           5
 E glutamate           7.5         73           4
 F phenylalanine       3.6         35           1
 G glycine             3.7         36           2
 H histidine           4.2         41           2
 I isoleucine          4.5         44           2
 K lysine              9.6         94           3
 L leucine             6.1         60           2
 M methionine          2.5         24           2
 N asparagine          6.7         66           2
 P proline             5.9         58           2
 Q glutamine           4.1         40           1
 R arginine            3.2         31           2
 S serine             13.2        129           3
 T threonine           6.8         67           2
 V valine              4.8         47           2
 W tryptophan          0.2          2           1
 Y tyrosine            1.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of hairy wing homolog 4 isoform 1 
ZNF280D               0.986   suppressor of hairy wing homolog 4 isoform 2 
ZNF280C               0.491   zinc finger protein 280C 
ZNF280B               0.272   zinc finger protein 280B 
ZNF280A               0.234   zinc finger protein 280A 
POGZ                  0.211   pogo transposable element with ZNF domain isoform 1 ...
POGZ                  0.211   pogo transposable element with ZNF domain isoform 2 ...
ZNF280D               0.120   suppressor of hairy wing homolog 4 isoform 3 
ZFY                   0.026   zinc finger protein, Y-linked isoform 1 
ZFY                   0.026   zinc finger protein, Y-linked isoform 3 
ZFY                   0.026   zinc finger protein, Y-linked isoform 2 
ZFX                   0.025   zinc finger protein, X-linked 
PRDM5                 0.025   PR domain containing 5 
ZBTB24                0.024   zinc finger and BTB domain containing 24 
ZNF774                0.024   zinc finger protein 774 
ZBTB41                0.024   zinc finger and BTB domain containing 41 
ZNF567                0.024   zinc finger protein 567 
ZNF668                0.024   zinc finger protein 668 
ZNF700                0.024   zinc finger protein 700 
ZNF433                0.024   zinc finger protein 433 
ZNF840                0.023   PREDICTED: zinc finger protein 840 
ZNF840                0.023   PREDICTED: zinc finger protein 840 
ZNF840                0.023   PREDICTED: zinc finger protein 840 
LOC100287429          0.023   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.023   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.023   PREDICTED: hypothetical protein XP_002343927 isofor...
ZBTB17                0.023   zinc finger and BTB domain containing 17 
ZNF84                 0.023   zinc finger protein 84 
ZNF84                 0.023   zinc finger protein 84 
ZNF169                0.023   zinc finger protein 169 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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