Guide to the Human Genome
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Name: ZFYVE21 Sequence: fasta or formatted (234aa) NCBI GI: 13129054
Description:

zinc finger, FYVE domain containing 21

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         15           2
 C cysteine            5.6         13           2
 D aspartate           4.7         11           1
 E glutamate           6.8         16           2
 F phenylalanine       5.1         12           1
 G glycine             6.4         15           3
 H histidine           2.6          6           2
 I isoleucine          1.7          4           1
 K lysine              6.0         14           2
 L leucine             9.0         21           2
 M methionine          3.0          7           1
 N asparagine          1.7          4           2
 P proline             4.7         11           2
 Q glutamine           4.7         11           1
 R arginine            8.5         20           2
 S serine              6.0         14           2
 T threonine           5.6         13           1
 V valine              8.5         20           2
 W tryptophan          0.9          2           1
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 21 
PIKFYVE               0.121   phosphatidylinositol-3-phosphate 5-kinase type III ...
ZFYVE28               0.119   zinc finger, FYVE domain containing 28 
ZFYVE16               0.108   zinc finger, FYVE domain containing 16 
ZFYVE16               0.108   zinc finger, FYVE domain containing 16 
MTMR3                 0.104   myotubularin-related protein 3 isoform b 
MTMR3                 0.102   myotubularin-related protein 3 isoform c 
ZFYVE9                0.100   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.098   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.098   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
MTMR4                 0.093   myotubularin related protein 4 
MTMR3                 0.087   myotubularin-related protein 3 isoform a 
FGD6                  0.085   FYVE, RhoGEF and PH domain containing 6 
HGS                   0.078   hepatocyte growth factor-regulated tyrosine kinase su...
RUFY1                 0.078   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.078   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.078   RUN and FYVE domain-containing 1 isoform a 
RUFY2                 0.078   RUN and FYVE domain-containing 2 isoform a 
PLEKHF1               0.078   apoptosis-inducing protein D 
ANKFY1                0.076   ankyrin repeat and FYVE domain containing 1 isoform...
FGD2                  0.076   FYVE, RhoGEF and PH domain containing 2 
WDFY3                 0.074   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.074   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
ZFYVE1                0.072   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.072   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
ZFYVE26               0.069   zinc finger, FYVE domain containing 26 
FYCO1                 0.069   FYVE and coiled-coil domain containing 1 
EEA1                  0.061   early endosome antigen 1, 162kD 
PLEKHF2               0.061   phafin 2 
FGD4                  0.059   FYVE, RhoGEF and PH domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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