Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACAD9 Sequence: fasta or formatted (621aa) NCBI GI: 21361497
Description:

acyl-Coenzyme A dehydrogenase family, member 9

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         48           3
 C cysteine            1.8         11           1
 D aspartate           4.0         25           1
 E glutamate           7.7         48           2
 F phenylalanine       4.7         29           2
 G glycine             8.2         51           2
 H histidine           1.8         11           1
 I isoleucine          6.4         40           2
 K lysine              6.3         39           3
 L leucine            11.3         70           3
 M methionine          2.4         15           1
 N asparagine          3.9         24           1
 P proline             2.7         17           2
 Q glutamine           3.2         20           2
 R arginine            6.0         37           2
 S serine              6.3         39           2
 T threonine           6.4         40           2
 V valine              6.3         39           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A dehydrogenase family, member 9 [Homo... 
ACADVL                0.400   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.400   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACADSB                0.171   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADS                 0.165   short-chain acyl-CoA dehydrogenase precursor 
IVD                   0.164   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
IVD                   0.159   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADM                 0.156   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.156   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACAD8                 0.132   acyl-Coenzyme A dehydrogenase family, member 8 
ACADL                 0.119   long-chain acyl-CoA dehydrogenase precursor 
GCDH                  0.098   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.090   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD11                0.082   putative acyl-CoA dehydrogenase 
ACAD10                0.079   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.079   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACOXL                 0.041   acyl-Coenzyme A oxidase-like 2 
ACAD10                0.031   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOX3                 0.029   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.029   acyl-Coenzyme A oxidase 3 isoform a 
ACOXL                 0.029   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.029   acyl-Coenzyme A oxidase-like 1 
ACOX1                 0.020   acyl-Coenzyme A oxidase 1 isoform a 
ACOX1                 0.018   acyl-Coenzyme A oxidase 1 isoform b 
ACOX2                 0.012   acyl-Coenzyme A oxidase 2 
ZNF317                0.005   zinc finger protein 317 
TSC2                  0.004   tuberous sclerosis 2 isoform 4 
TSC2                  0.004   tuberous sclerosis 2 isoform 1 
TSC2                  0.004   tuberous sclerosis 2 isoform 5 
SMARCA1               0.004   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press