Guide to the Human Genome
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Name: ACADVL Sequence: fasta or formatted (655aa) NCBI GI: 4557235
Description:

acyl-Coenzyme A dehydrogenase, very long chain isoform 1 precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [633aa] acyl-Coenzyme A dehydrogenase, very long chain isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         69           3
 C cysteine            1.1          7           1
 D aspartate           3.4         22           1
 E glutamate           6.7         44           2
 F phenylalanine       4.7         31           2
 G glycine            11.0         72           3
 H histidine           1.7         11           1
 I isoleucine          4.4         29           2
 K lysine              6.1         40           2
 L leucine            10.4         68           3
 M methionine          3.2         21           1
 N asparagine          2.9         19           2
 P proline             4.0         26           2
 Q glutamine           4.3         28           2
 R arginine            5.2         34           3
 S serine              6.6         43           2
 T threonine           4.9         32           2
 V valine              6.7         44           3
 W tryptophan          0.8          5           1
 Y tyrosine            1.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A dehydrogenase, very long chain isofor... 
ACADVL                0.956   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACAD9                 0.379   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADS                 0.147   short-chain acyl-CoA dehydrogenase precursor 
IVD                   0.144   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADSB                0.144   acyl-Coenzyme A dehydrogenase, short/branched chain p...
IVD                   0.144   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACAD8                 0.131   acyl-Coenzyme A dehydrogenase family, member 8 
ACADM                 0.125   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.125   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACADL                 0.105   long-chain acyl-CoA dehydrogenase precursor 
GCDH                  0.098   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.091   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD10                0.052   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.052   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.052   putative acyl-CoA dehydrogenase 
ACOXL                 0.040   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.028   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.028   acyl-Coenzyme A oxidase-like 1 
ACOX3                 0.026   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.026   acyl-Coenzyme A oxidase 3 isoform a 
ACAD10                0.024   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOX1                 0.016   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.010   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.010   acyl-Coenzyme A oxidase 2 
LOC100289969          0.007   PREDICTED: hypothetical protein XP_002347692 
ATP2C2                0.006   ATPase, Ca++ transporting, type 2C, member 2 
RBMS1                 0.006   RNA binding motif, single stranded interacting protei...
RBMS1                 0.006   RNA binding motif, single stranded interacting protei...
TACC2                 0.005   transforming, acidic coiled-coil containing protein...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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