Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACOXL Sequence: fasta or formatted (517aa) NCBI GI: 218563754
Description:

acyl-Coenzyme A oxidase-like 3

Referenced in:

Peroxisomes

Other entries for this name:
alt prot [547aa] acyl-Coenzyme A oxidase-like 2
alt prot [580aa] acyl-Coenzyme A oxidase-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         47           2
 C cysteine            1.9         10           1
 D aspartate           4.3         22           2
 E glutamate           5.8         30           2
 F phenylalanine       5.0         26           2
 G glycine             6.8         35           2
 H histidine           2.7         14           2
 I isoleucine          4.3         22           2
 K lysine              6.0         31           2
 L leucine            11.2         58           2
 M methionine          3.5         18           2
 N asparagine          3.3         17           1
 P proline             3.1         16           1
 Q glutamine           5.0         26           1
 R arginine            6.4         33           2
 S serine              5.0         26           1
 T threonine           5.6         29           1
 V valine              6.4         33           2
 W tryptophan          1.2          6           1
 Y tyrosine            3.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.993   acyl-Coenzyme A oxidase-like 1 
ACOXL                 0.985   acyl-Coenzyme A oxidase-like 2 
ACOX3                 0.170   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.170   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.165   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.160   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.120   acyl-Coenzyme A oxidase 2 
ACADS                 0.056   short-chain acyl-CoA dehydrogenase precursor 
ACADSB                0.040   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADVL                0.035   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.035   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACAD9                 0.035   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADL                 0.032   long-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.030   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.030   medium-chain acyl-CoA dehydrogenase isoform a precurs...
GCDH                  0.027   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
GCDH                  0.027   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
IVD                   0.026   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
IVD                   0.026   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACAD8                 0.010   acyl-Coenzyme A dehydrogenase family, member 8 
ACAD11                0.008   putative acyl-CoA dehydrogenase 
ACAD10                0.005   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.005   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAT1                 0.004   acetyl-Coenzyme A acetyltransferase 1 precursor [Homo...
RHAG                  0.004   Rh-associated glycoprotein 
UTP14C                0.004   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
KLHL4                 0.004   kelch-like 4 isoform 2 
KLHL4                 0.004   kelch-like 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press