Guide to the Human Genome
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Name: ACOX3 Sequence: fasta or formatted (624aa) NCBI GI: 156104866
Description:

acyl-Coenzyme A oxidase 3 isoform b

Referenced in:

Peroxisomes

Other entries for this name:
alt prot [700aa] acyl-Coenzyme A oxidase 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         58           2
 C cysteine            2.2         14           1
 D aspartate           4.8         30           2
 E glutamate           5.6         35           4
 F phenylalanine       5.3         33           1
 G glycine             6.9         43           2
 H histidine           3.0         19           1
 I isoleucine          3.2         20           2
 K lysine              4.3         27           2
 L leucine            12.8         80           2
 M methionine          1.9         12           1
 N asparagine          2.6         16           2
 P proline             4.8         30           2
 Q glutamine           3.8         24           2
 R arginine            7.1         44           2
 S serine              8.3         52           2
 T threonine           3.7         23           2
 V valine              5.9         37           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.974   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.181   acyl-Coenzyme A oxidase 1 isoform a 
ACOX1                 0.178   acyl-Coenzyme A oxidase 1 isoform b 
ACOXL                 0.168   acyl-Coenzyme A oxidase-like 2 
ACOX2                 0.168   acyl-Coenzyme A oxidase 2 
ACOXL                 0.140   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.140   acyl-Coenzyme A oxidase-like 1 
ACADS                 0.028   short-chain acyl-CoA dehydrogenase precursor 
ACAD9                 0.028   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADSB                0.028   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADVL                0.027   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.027   acyl-Coenzyme A dehydrogenase, very long chain isofo...
GCDH                  0.019   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.019   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACADM                 0.016   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.016   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACAD8                 0.014   acyl-Coenzyme A dehydrogenase family, member 8 
ACADL                 0.012   long-chain acyl-CoA dehydrogenase precursor 
IVD                   0.011   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
IVD                   0.011   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
PIGO                  0.007   phosphatidylinositol glycan anchor biosynthesis, cla...
PIGO                  0.007   phosphatidylinositol glycan anchor biosynthesis, cla...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
MYH11                 0.005   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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