Guide to the Human Genome
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Name: ACOXL Sequence: fasta or formatted (580aa) NCBI GI: 218563752
Description:

acyl-Coenzyme A oxidase-like 1

Referenced in:

Peroxisomes

Other entries for this name:
alt prot [547aa] acyl-Coenzyme A oxidase-like 2
alt prot [517aa] acyl-Coenzyme A oxidase-like 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         56           2
 C cysteine            1.7         10           1
 D aspartate           4.5         26           2
 E glutamate           5.3         31           2
 F phenylalanine       4.8         28           2
 G glycine             6.4         37           2
 H histidine           2.8         16           2
 I isoleucine          4.5         26           2
 K lysine              5.9         34           2
 L leucine            11.2         65           2
 M methionine          3.1         18           2
 N asparagine          3.3         19           1
 P proline             4.1         24           1
 Q glutamine           4.7         27           1
 R arginine            6.9         40           2
 S serine              5.2         30           1
 T threonine           5.3         31           1
 V valine              6.0         35           2
 W tryptophan          1.2          7           1
 Y tyrosine            3.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A oxidase-like 1 
ACOXL                 0.882   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.868   acyl-Coenzyme A oxidase-like 2 
ACOX3                 0.159   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.154   acyl-Coenzyme A oxidase 1 isoform b 
ACOX3                 0.151   acyl-Coenzyme A oxidase 3 isoform b 
ACOX1                 0.150   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.108   acyl-Coenzyme A oxidase 2 
ACADS                 0.050   short-chain acyl-CoA dehydrogenase precursor 
ACADSB                0.036   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADVL                0.031   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.031   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACAD9                 0.031   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADL                 0.028   long-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.026   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.026   medium-chain acyl-CoA dehydrogenase isoform a precurs...
GCDH                  0.024   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
GCDH                  0.024   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
IVD                   0.023   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
IVD                   0.023   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACAD8                 0.009   acyl-Coenzyme A dehydrogenase family, member 8 
ACAD11                0.007   putative acyl-CoA dehydrogenase 
ACAD10                0.004   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.004   acyl-Coenzyme A dehydrogenase family, member 10 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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