Guide to the Human Genome
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Name: GCDH Sequence: fasta or formatted (428aa) NCBI GI: 7669494
Description:

glutaryl-Coenzyme A dehydrogenase isoform b precursor

Referenced in:

Amino Acid Catabolism
Mitochondria

Other entries for this name:
alt prot [438aa] glutaryl-Coenzyme A dehydrogenase isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         33           2
 C cysteine            2.3         10           1
 D aspartate           3.7         16           1
 E glutamate           6.5         28           2
 F phenylalanine       2.3         10           1
 G glycine             9.3         40           2
 H histidine           1.9          8           1
 I isoleucine          4.2         18           2
 K lysine              3.7         16           2
 L leucine            12.1         52           2
 M methionine          3.7         16           1
 N asparagine          4.0         17           2
 P proline             3.7         16           1
 Q glutamine           4.4         19           1
 R arginine            7.7         33           2
 S serine              7.9         34           2
 T threonine           4.4         19           2
 V valine              5.6         24           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutaryl-Coenzyme A dehydrogenase isoform b precursor... 
GCDH                  0.965   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
ACADS                 0.169   short-chain acyl-CoA dehydrogenase precursor 
ACADSB                0.151   acyl-Coenzyme A dehydrogenase, short/branched chain p...
IVD                   0.149   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACADVL                0.138   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.138   acyl-Coenzyme A dehydrogenase, very long chain isofo...
IVD                   0.135   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACAD9                 0.128   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADM                 0.126   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.126   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACADL                 0.108   long-chain acyl-CoA dehydrogenase precursor 
ACAD8                 0.104   acyl-Coenzyme A dehydrogenase family, member 8 
ACAD10                0.050   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.050   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.038   putative acyl-CoA dehydrogenase 
ACOXL                 0.035   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.032   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.032   acyl-Coenzyme A oxidase-like 1 
ACOX3                 0.028   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.028   acyl-Coenzyme A oxidase 3 isoform a 
ACAD10                0.025   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOX2                 0.017   acyl-Coenzyme A oxidase 2 
ARHGEF17              0.014   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
ACOX1                 0.012   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.011   acyl-Coenzyme A oxidase 1 isoform a 
ATG4C                 0.008   APG4 autophagy 4 homolog C isoform 8 
ATG4C                 0.008   APG4 autophagy 4 homolog C isoform 7 
EDEM3                 0.008   ER degradation enhancer, mannosidase alpha-like 3 [...
G0S2                  0.008   G0/G1switch 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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