Guide to the Human Genome
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Name: ACADVL Sequence: fasta or formatted (633aa) NCBI GI: 76496475
Description:

acyl-Coenzyme A dehydrogenase, very long chain isoform 2 precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [655aa] acyl-Coenzyme A dehydrogenase, very long chain isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         65           3
 C cysteine            1.1          7           1
 D aspartate           3.0         19           1
 E glutamate           7.0         44           2
 F phenylalanine       4.9         31           2
 G glycine            11.4         72           3
 H histidine           1.6         10           1
 I isoleucine          4.6         29           2
 K lysine              5.7         36           2
 L leucine            10.3         65           3
 M methionine          3.3         21           1
 N asparagine          3.0         19           2
 P proline             3.8         24           2
 Q glutamine           4.4         28           2
 R arginine            5.2         33           3
 S serine              6.3         40           2
 T threonine           4.9         31           2
 V valine              7.0         44           3
 W tryptophan          0.8          5           1
 Y tyrosine            1.6         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A dehydrogenase, very long chain isofo... 
ACADVL                0.989   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACAD9                 0.392   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADS                 0.152   short-chain acyl-CoA dehydrogenase precursor 
IVD                   0.149   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADSB                0.149   acyl-Coenzyme A dehydrogenase, short/branched chain p...
IVD                   0.148   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACAD8                 0.135   acyl-Coenzyme A dehydrogenase family, member 8 
ACADM                 0.129   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.129   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACADL                 0.111   long-chain acyl-CoA dehydrogenase precursor 
GCDH                  0.101   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.094   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD10                0.054   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.054   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.054   putative acyl-CoA dehydrogenase 
ACOXL                 0.042   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.029   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.029   acyl-Coenzyme A oxidase-like 1 
ACOX3                 0.027   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.027   acyl-Coenzyme A oxidase 3 isoform a 
ACAD10                0.025   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOX1                 0.016   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.011   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.010   acyl-Coenzyme A oxidase 2 
LOC100289969          0.007   PREDICTED: hypothetical protein XP_002347692 
RBMS1                 0.006   RNA binding motif, single stranded interacting protei...
RBMS1                 0.006   RNA binding motif, single stranded interacting protei...
LIM2                  0.005   lens intrinsic membrane protein 2, 19kDa isoform 2 ...
KLF10                 0.004   Kruppel-like factor 10 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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