Guide to the Human Genome
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Name: ACAD11 Sequence: fasta or formatted (780aa) NCBI GI: 38505218
Description:

putative acyl-CoA dehydrogenase

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         62           3
 C cysteine            1.8         14           1
 D aspartate           3.8         30           1
 E glutamate           6.2         48           2
 F phenylalanine       4.4         34           2
 G glycine             6.9         54           2
 H histidine           3.2         25           2
 I isoleucine          6.9         54           2
 K lysine              6.0         47           3
 L leucine             9.6         75           2
 M methionine          2.4         19           1
 N asparagine          4.0         31           2
 P proline             4.7         37           2
 Q glutamine           5.3         41           2
 R arginine            4.5         35           1
 S serine              6.8         53           2
 T threonine           4.9         38           2
 V valine              6.0         47           2
 W tryptophan          1.5         12           2
 Y tyrosine            3.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   putative acyl-CoA dehydrogenase 
ACAD10                0.419   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.419   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD10                0.299   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACADS                 0.068   short-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.064   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.064   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACAD9                 0.063   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADSB                0.063   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACAD8                 0.043   acyl-Coenzyme A dehydrogenase family, member 8 
ACADVL                0.043   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.043   acyl-Coenzyme A dehydrogenase, very long chain isofo...
IVD                   0.041   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
IVD                   0.038   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADL                 0.034   long-chain acyl-CoA dehydrogenase precursor 
GCDH                  0.022   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.021   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
CD300LB               0.006   CD300 molecule-like family member b 
ACOXL                 0.006   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.005   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.005   acyl-Coenzyme A oxidase-like 1 
GEMIN4                0.004   gemin 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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