Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACADL Sequence: fasta or formatted (430aa) NCBI GI: 4501857
Description:

long-chain acyl-CoA dehydrogenase precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         41           2
 C cysteine            1.6          7           1
 D aspartate           3.5         15           1
 E glutamate           8.1         35           2
 F phenylalanine       4.0         17           2
 G glycine             9.1         39           2
 H histidine           4.0         17           2
 I isoleucine          7.2         31           1
 K lysine              7.0         30           2
 L leucine             7.9         34           2
 M methionine          2.6         11           1
 N asparagine          3.0         13           1
 P proline             3.3         14           1
 Q glutamine           3.7         16           1
 R arginine            4.9         21           2
 S serine              6.7         29           1
 T threonine           3.5         15           1
 V valine              6.0         26           2
 W tryptophan          1.6          7           1
 Y tyrosine            2.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   long-chain acyl-CoA dehydrogenase precursor 
IVD                   0.255   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
IVD                   0.238   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADSB                0.229   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADS                 0.219   short-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.219   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.219   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACAD8                 0.206   acyl-Coenzyme A dehydrogenase family, member 8 
ACAD9                 0.168   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADVL                0.160   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACADVL                0.158   acyl-Coenzyme A dehydrogenase, very long chain isofor...
GCDH                  0.116   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.107   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD10                0.064   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.064   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.063   putative acyl-CoA dehydrogenase 
ACOXL                 0.057   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.038   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.038   acyl-Coenzyme A oxidase-like 1 
ACAD10                0.021   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOX3                 0.018   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.018   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.013   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.012   acyl-Coenzyme A oxidase 2 
ACOX1                 0.008   acyl-Coenzyme A oxidase 1 isoform b 
CCDC113               0.008   coiled-coil domain containing 113 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press