Guide to the Human Genome
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Name: ACADM Sequence: fasta or formatted (425aa) NCBI GI: 187960098
Description:

medium-chain acyl-CoA dehydrogenase isoform b precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [421aa] medium-chain acyl-CoA dehydrogenase isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         48           2
 C cysteine            2.1          9           2
 D aspartate           4.2         18           1
 E glutamate           7.5         32           2
 F phenylalanine       4.2         18           1
 G glycine             9.6         41           2
 H histidine           1.2          5           1
 I isoleucine          6.6         28           3
 K lysine              6.8         29           3
 L leucine             6.6         28           2
 M methionine          3.1         13           1
 N asparagine          3.8         16           1
 P proline             3.5         15           1
 Q glutamine           4.9         21           2
 R arginine            6.1         26           2
 S serine              3.5         15           1
 T threonine           5.2         22           1
 V valine              4.9         21           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.5         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   medium-chain acyl-CoA dehydrogenase isoform b precu... 
ACADM                 0.983   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACADS                 0.288   short-chain acyl-CoA dehydrogenase precursor 
ACADSB                0.264   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACAD8                 0.253   acyl-Coenzyme A dehydrogenase family, member 8 
IVD                   0.243   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...
ACAD9                 0.223   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADL                 0.222   long-chain acyl-CoA dehydrogenase precursor 
IVD                   0.221   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADVL                0.188   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.188   acyl-Coenzyme A dehydrogenase, very long chain isofo...
GCDH                  0.138   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.126   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD10                0.121   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.121   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.120   putative acyl-CoA dehydrogenase 
ACOXL                 0.052   acyl-Coenzyme A oxidase-like 2 
ACAD10                0.040   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOXL                 0.036   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.036   acyl-Coenzyme A oxidase-like 1 
ACOX3                 0.024   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.024   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.020   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.016   acyl-Coenzyme A oxidase 1 isoform a 
ACOX2                 0.012   acyl-Coenzyme A oxidase 2 
PSMC3IP               0.007   PSMC3 interacting protein isoform 1 
PSMC3IP               0.005   PSMC3 interacting protein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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