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Search of human proteins with 21359918
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens] 424 e-119
gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens] 233 1e-61
gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens] 233 1e-61
gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens] 233 1e-61
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 77 1e-14
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 77 1e-14
gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens] 72 4e-13
gi|7657496 RAB guanine nucleotide exchange factor (GEF) 1 [Homo ... 43 2e-04
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 40 0.001
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 40 0.001
gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo ... 39 0.004
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 38 0.005
gi|46399200 testis-specific bromodomain protein [Homo sapiens] 37 0.012
gi|46399198 testis-specific bromodomain protein [Homo sapiens] 37 0.012
gi|11560152 zinc finger protein 335 [Homo sapiens] 37 0.016
gi|18702331 OTU domain containing 7A [Homo sapiens] 36 0.020
gi|15451916 bone morphogenetic protein receptor type II precurso... 36 0.027
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.027
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 36 0.027
gi|153070260 myristoylated alanine-rich protein kinase C substra... 35 0.035
gi|148612879 polyhomeotic like 3 [Homo sapiens] 35 0.045
gi|113204609 zinc finger protein 750 [Homo sapiens] 35 0.045
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 34 0.10
gi|148746220 spermatogenesis associated, serine-rich 2 [Homo sap... 33 0.13
gi|83367077 mucin 16 [Homo sapiens] 33 0.17
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 33 0.17
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 33 0.17
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 33 0.17
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 33 0.17
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 33 0.17
>gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
Length = 208
Score = 424 bits (1089), Expect = e-119
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE 60
MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE 60
Query: 61 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV 120
SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
Sbjct: 61 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV 120
Query: 121 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN 180
QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
Sbjct: 121 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN 180
Query: 181 CSYNYKADAAEKIRKENPVVVGEKIQKI 208
CSYNYKADAAEKIRKENPVVVGEKIQKI
Sbjct: 181 CSYNYKADAAEKIRKENPVVVGEKIQKI 208
>gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 233 bits (593), Expect = 1e-61
Identities = 125/215 (58%), Positives = 149/215 (69%), Gaps = 9/215 (4%)
Query: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS 57
MAQETN + PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ +S GR+SP T S S
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP 59
Query: 58 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSE--SVASSQLDSTSVDKAVP 115
S+S VQ D S+ + A STS + PV+ + + ++ S+ D + K
Sbjct: 60 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKT-E 118
Query: 116 ETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVH 173
+E V S + QPS QS K+ E PK KKNRCFMCRKKVGLTGF+CRCGN++CG+H
Sbjct: 119 VSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLH 178
Query: 174 RYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
RYSD HNC Y+YKA+AA KIRKENPVVV EKIQ+I
Sbjct: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 233 bits (593), Expect = 1e-61
Identities = 125/215 (58%), Positives = 149/215 (69%), Gaps = 9/215 (4%)
Query: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS 57
MAQETN + PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ +S GR+SP T S S
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP 59
Query: 58 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSE--SVASSQLDSTSVDKAVP 115
S+S VQ D S+ + A STS + PV+ + + ++ S+ D + K
Sbjct: 60 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKT-E 118
Query: 116 ETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVH 173
+E V S + QPS QS K+ E PK KKNRCFMCRKKVGLTGF+CRCGN++CG+H
Sbjct: 119 VSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLH 178
Query: 174 RYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
RYSD HNC Y+YKA+AA KIRKENPVVV EKIQ+I
Sbjct: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 233 bits (593), Expect = 1e-61
Identities = 125/215 (58%), Positives = 149/215 (69%), Gaps = 9/215 (4%)
Query: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS 57
MAQETN + PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ +S GR+SP T S S
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP 59
Query: 58 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSE--SVASSQLDSTSVDKAVP 115
S+S VQ D S+ + A STS + PV+ + + ++ S+ D + K
Sbjct: 60 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKT-E 118
Query: 116 ETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVH 173
+E V S + QPS QS K+ E PK KKNRCFMCRKKVGLTGF+CRCGN++CG+H
Sbjct: 119 VSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLH 178
Query: 174 RYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
RYSD HNC Y+YKA+AA KIRKENPVVV EKIQ+I
Sbjct: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 77.0 bits (188), Expect = 1e-14
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 139 LEKPKQKKNRCFMCRKKVGL-TGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKEN 197
L+ K+ N CF+C KK GL + +ECRCGN +C HRY++ H C+Y+YK+ + + N
Sbjct: 657 LQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEAN 716
Query: 198 PVVVGEKIQKI 208
PVV K+ KI
Sbjct: 717 PVVNAPKLPKI 727
>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 77.0 bits (188), Expect = 1e-14
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 139 LEKPKQKKNRCFMCRKKVGL-TGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKEN 197
L+ K+ N CF+C KK GL + +ECRCGN +C HRY++ H C+Y+YK+ + + N
Sbjct: 657 LQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEAN 716
Query: 198 PVVVGEKIQKI 208
PVV K+ KI
Sbjct: 717 PVVNAPKLPKI 727
>gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]
Length = 227
Score = 71.6 bits (174), Expect = 4e-13
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 18 CGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVS--------SLSESLPVQCTDG 69
CGF+G+ +T +CS C+ + ++Q + S P+TS S + S++ T
Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDD---SAPSTSNSQSDLFSEETTSDNNNTSITTP 76
Query: 70 SVPEAQSALDSTSSSMQPSP--------VSNQSLLSESVASSQLDSTSVDKAVPETEDVQ 121
++ +Q L + + PS ++ SL++ + S DS S ++A P
Sbjct: 77 TLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGTDSQSENEASP------ 130
Query: 122 ASVSDTAQQPSEEQSKSLEKPKQK-KNRCFMCRKKVGLTGFE---CRCGNVYCGVHRYSD 177
V + E+S+ + KQK + RCF C+ K+ L E CRCG V+C +HR +
Sbjct: 131 --VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPE 188
Query: 178 VHNCSYNYKADAAEK 192
H+C++++ E+
Sbjct: 189 QHDCTFDHMGRGREE 203
>gi|7657496 RAB guanine nucleotide exchange factor (GEF) 1 [Homo
sapiens]
Length = 491
Score = 43.1 bits (100), Expect = 2e-04
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 9 QVPMLCSTGCGFYGNPRTNGMCSVCYKE--HLQRQ 41
Q +LC GCG+YGNP G CS C++E H RQ
Sbjct: 14 QSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 40.4 bits (93), Expect = 0.001
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 18 CGFYGNPRTNGMCSVCYKEHLQRQ 41
C FYG+P TN CS CY+E L+R+
Sbjct: 807 CSFYGHPETNNFCSCCYREELRRR 830
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 40.0 bits (92), Expect = 0.001
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 102 SSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKK-NRCFMCRKKVGLT- 159
+S+ S + +PE + +A P+EE ++L K N C + G+T
Sbjct: 849 ASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTT 908
Query: 160 -GFECR-CGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVG 202
G C+ C YC H ++H C +A A ++I +E + G
Sbjct: 909 LGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAG 953
>gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
Length = 790
Score = 38.5 bits (88), Expect = 0.004
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
Query: 17 GCGFYGNPRTNGMCSVCYKEHLQRQN--SSNGRISPPATSVSSLSESLPVQCTDGSVPEA 74
GC ++G P G C++C+ E+ + ++ +++G++SP A+ + L +C
Sbjct: 611 GCVYFGTPENKGFCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPCLGRECGTLGSTMF 670
Query: 75 QSALDSTSSSMQPSPVSNQSLLSESVASSQ-LDSTSVDKAVPETEDVQASVSDTAQQPSE 133
+ Q E + SSQ D ++ + +AS + SE
Sbjct: 671 EGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASCKNILACRSE 730
Query: 134 EQSKSLEKPKQK 145
E + P Q+
Sbjct: 731 ELCMECQHPNQR 742
Score = 27.3 bits (59), Expect = 9.4
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 19/65 (29%)
Query: 27 NGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQ 86
NG+CS C+K A + SSLS SLP C +S D +
Sbjct: 533 NGICSTCFKR-------------TTAEASSSLSTSLPPSC------HQRSKSDPSRLVRS 573
Query: 87 PSPVS 91
PSP S
Sbjct: 574 PSPHS 578
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 17 GCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQS 76
GCG G CS +SS+ S ++S SS S S + S + S
Sbjct: 2594 GCGTGGRN-----CSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 77 ALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPET---EDVQASVSDTAQQPSE 133
+ S+SSS S S+ S S S +S D+A P QA++ A + +
Sbjct: 2649 SSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAG 2708
Query: 134 EQSKSLEKPKQK 145
+ S P +K
Sbjct: 2709 KARPSAHSPGKK 2720
>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 37.0 bits (84), Expect = 0.012
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 48 ISPPATSVSSLSESLPVQCT---DGSVPEAQSALDST-----SSSMQPSP-VSNQSLLSE 98
+ PPA + E L Q + + + + L+S S QPS V N S LSE
Sbjct: 580 LKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTKSDKTQPSKAVENVSRLSE 639
Query: 99 SVASS----QLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRK 154
S +SS + +S+S D + ++ D ++ + + S S E K+ KN C +
Sbjct: 640 SSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSPSKENVKKMKNECILPEG 699
Query: 155 KVGLT 159
+ G+T
Sbjct: 700 RTGVT 704
>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 37.0 bits (84), Expect = 0.012
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 48 ISPPATSVSSLSESLPVQCT---DGSVPEAQSALDST-----SSSMQPSP-VSNQSLLSE 98
+ PPA + E L Q + + + + L+S S QPS V N S LSE
Sbjct: 580 LKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTKSDKTQPSKAVENVSRLSE 639
Query: 99 SVASS----QLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRK 154
S +SS + +S+S D + ++ D ++ + + S S E K+ KN C +
Sbjct: 640 SSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSPSKENVKKMKNECILPEG 699
Query: 155 KVGLT 159
+ G+T
Sbjct: 700 RTGVT 704
>gi|11560152 zinc finger protein 335 [Homo sapiens]
Length = 1342
Score = 36.6 bits (83), Expect = 0.016
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 50 PPATSVSSLSESLPVQCTD----GSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQL 105
PP + SE+ + C+D ++ Q A +ST+ + Q + LL A +L
Sbjct: 753 PPEATTFQSSEAPSLLCSDTLGGATIIYQQGAEESTAMATQTA----LDLLLNMSAQREL 808
Query: 106 DSTSVDKAVPETEDVQASVSDTAQQPSEE 134
T++ AV ++EDV+A ++ QPS E
Sbjct: 809 GGTALQVAVVKSEDVEAGLASPGGQPSPE 837
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 36.2 bits (82), Expect = 0.020
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 18 CGFYGNPRTNGMCSVCYKEHLQRQNSSNG 46
C FYG T CS CY+E L+R+ + G
Sbjct: 895 CAFYGRAETEHYCSYCYREELRRRREARG 923
>gi|15451916 bone morphogenetic protein receptor type II precursor
[Homo sapiens]
Length = 1038
Score = 35.8 bits (81), Expect = 0.027
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 41 QNSSNGRISPPATSVSSLSESLPVQCTDGSVP--------------EAQSALDSTSSSMQ 86
+ + RI P TSV+SLS + T G P E + + S+
Sbjct: 591 RQQAQARIPSPETSVTSLSTNTTTTNTTGLTPSTGMTTISEMPYPDETNLHTTNVAQSIG 650
Query: 87 PSPVSNQSLLSESVASSQLDSTSVDKAVPETED 119
P+PV Q L E + +++LD VDK + E+ D
Sbjct: 651 PTPVCLQ-LTEEDLETNKLDPKEVDKNLKESSD 682
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.8 bits (81), Expect = 0.027
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 49 SPPATSVSSLSESLPVQCT-------DGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVA 101
SP ++ E P + T S + S+ S+SSS S S+ S S S +
Sbjct: 2581 SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Query: 102 SSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKP 142
SS S+S A P + + S P E +S+S KP
Sbjct: 2641 SSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKP 2681
Score = 31.6 bits (70), Expect = 0.50
Identities = 22/74 (29%), Positives = 30/74 (40%)
Query: 45 NGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQ 104
NG +S PA V P T P A +AL S S+ S S S +SS
Sbjct: 2491 NGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSS 2550
Query: 105 LDSTSVDKAVPETE 118
S+S + ++E
Sbjct: 2551 SSSSSSGSSSSDSE 2564
Score = 27.3 bits (59), Expect = 9.4
Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 26/125 (20%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQ------------------CTDGSVPEAQSALDSTSS 83
+SS+ S ++S S SLPVQ +G PE A S
Sbjct: 2548 SSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRS 2607
Query: 84 SMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQ--SKSLEK 141
S S S+ S S S +SS S+S + +S S ++ PS + ++L K
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSS------SSSSSSSSSSSSSSSPSPAKPGPQALPK 2661
Query: 142 PKQKK 146
P K
Sbjct: 2662 PASPK 2666
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 35.8 bits (81), Expect = 0.027
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 56 SSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVP 115
SS S S +D S ++S STSSS + S S S S ASS S+S D
Sbjct: 88 SSSSSSSDSSASDSS---SESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDS--- 141
Query: 116 ETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNR 148
+++ +S S T+ S + E PK+KK +
Sbjct: 142 DSDSSSSSSSSTSTDSSSDD----EPPKKKKKK 170
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 35.4 bits (80), Expect = 0.035
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 45 NGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQ 104
NG SP A S E L +GS P A + + S SP + + + A+ +
Sbjct: 42 NGDASPAAAE-SGAKEELQA---NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPE 97
Query: 105 LDSTSVDKAVPE------------TEDVQASVSDTAQQPSEEQ----SKSLEKPKQKKNR 148
++ V+K P E AS + + P E S S E PK+KK R
Sbjct: 98 AGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKR 157
Query: 149 CFMCRKKVGLTGF 161
F +K L+GF
Sbjct: 158 -FSFKKSFKLSGF 169
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 35.0 bits (79), Expect = 0.045
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 38 LQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLS 97
LQ+Q+ S+ ++ A +SLS P GSV + QS++ TS ++ SP Q L+S
Sbjct: 95 LQQQHLSSSQLQSLAAVQASLSSGRPSTSPTGSVTQ-QSSMSQTSINLSTSPTPAQ-LIS 152
Query: 98 ESVASS 103
S ASS
Sbjct: 153 RSQASS 158
Score = 28.1 bits (61), Expect = 5.5
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 3 QETNHSQVPMLCSTGCGFY-GNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSES 61
Q + SQ+ L + G P T+ SV + + Q S N SP T +S S
Sbjct: 98 QHLSSSQLQSLAAVQASLSSGRPSTSPTGSVTQQSSMS-QTSINLSTSP--TPAQLISRS 154
Query: 62 LPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQ 121
T GS+ + L STS ++ S + + +V +P V
Sbjct: 155 QASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMLIFTPATTVAAVQSDIP----VV 210
Query: 122 ASVSDTAQQPSEEQSKSLEKPKQK 145
+S S ++ Q + Q ++L QK
Sbjct: 211 SSSSSSSCQSAATQVQNLTLRSQK 234
>gi|113204609 zinc finger protein 750 [Homo sapiens]
Length = 723
Score = 35.0 bits (79), Expect = 0.045
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 11 PMLCSTGCGFYGNP------RTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSL------ 58
P S G G P +T+ C Y + +S+ GR+ PP S+++
Sbjct: 402 PRAGSAATGSPGRPSPTDFMQTSQTCEGLYDLSNKAASSALGRLYPPEQSLTAFRPVKKS 461
Query: 59 SESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSV 110
+E LP Q + + E+ +L+ + P+P + SL+SE+ SS DS+ +
Sbjct: 462 TECLPAQAAE-TTAESPVSLNVVNGD-PPAPTGSASLVSEAAPSSPDDSSGM 511
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 33.9 bits (76), Expect = 0.10
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 27 NGMCSVCYKEHLQRQNSSNG--RISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSS 84
NG C + H + + R PP S P Q GS PE+ S+ DS SSS
Sbjct: 330 NGFCPPPHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRP-QPHLGSFPESCSS-DSESSS 387
Query: 85 MQPSPV------SNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
S+ S S SV+S + + ++ E E+ + SD+++ SEE+ S
Sbjct: 388 YSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEEEEEEEEEEGGSGASDSSEVSSEEEDSS 447
Query: 139 LE 140
E
Sbjct: 448 TE 449
>gi|148746220 spermatogenesis associated, serine-rich 2 [Homo
sapiens]
Length = 545
Score = 33.5 bits (75), Expect = 0.13
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 45 NGRISPPATSVSSLSESLPVQCTDG-SVPEAQSA----LDSTSSSMQP--SPVSNQSLLS 97
NG I+ SV SLSE L D + + +SA LD T S +Q S +SL
Sbjct: 135 NGAIND-TESVDSLSEGLETLSIDARELEDPESAMLDTLDRTGSMLQNGVSDFETKSLTM 193
Query: 98 ESVASSQLD---STSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRC 149
S+ +SQ + S+ + ET+ + D S++ S ++EK + RC
Sbjct: 194 HSIHNSQQPRNAAKSLSRPTTETQFSNMGMEDVPLATSKKLSSNIEKSVKDLQRC 248
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 61 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV 120
SLPV+ T S P +Q +L S+ + PSPVS+ S +S+ + S V TE +
Sbjct: 7383 SLPVEET--SPPSSQLSL---SAMISPSPVSSTLPASSHSSSASVTSLLTPGQVKTTEVL 7437
Query: 121 QASVSDTAQQPSEEQSKSLE 140
AS P S S+E
Sbjct: 7438 DASAEPETSSPPSLSSTSVE 7457
Score = 31.6 bits (70), Expect = 0.50
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 50 PPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLD-ST 108
P ++S+++ESLP + VP + S +T SS P+ + S S ++D S
Sbjct: 10312 PGDATLSTIAESLP---SSTPVPFSSSTFTTTDSSTIPAL---HEITSSSATPYRVDTSL 10365
Query: 109 SVDKAVPETEDVQASVSDTAQQPSEEQSKSL 139
+ + E V S DT+ QP S +
Sbjct: 10366 GTESSTTEGRLVMVSTLDTSSQPGRTSSSPI 10396
Score = 31.2 bits (69), Expect = 0.65
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 49 SPPATS-VSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS--NQSLLSESVASSQL 105
SPP +S + + P T P D+ +S +P+ S N S S + ++
Sbjct: 6813 SPPVSSTLPKTIHTTPSPMTSLLTPSLVMTTDTLGTSPEPTTSSPPNLSSTSHEILTTDE 6872
Query: 106 DSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQK 145
D+T+++ P T +V T+ + S + K K
Sbjct: 6873 DTTAIEAMHPSTSTAATNVETTSSGHGSQSSVLADSEKTK 6912
Score = 28.5 bits (62), Expect = 4.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 ALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSV--DKAVPETEDVQASVSDTAQQPSEE 134
+L S+ ++ PSPVS S L ES++SS L TS+ T+ + S P+
Sbjct: 7973 SLMSSPATTSPSPVS--STLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANL 8030
Query: 135 QSKSLE 140
S S+E
Sbjct: 8031 SSTSVE 8036
Score = 27.7 bits (60), Expect = 7.2
Identities = 20/92 (21%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 38 LQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDS--TSSSMQPSPVSNQ-- 93
+++ +SS+ +S P T+ S+S +LP S+P + ++ S T ++ + S +
Sbjct: 10015 VEKTSSSSSLLSLPVTTSPSVSSTLP-----QSIPSSSFSVTSLLTPGMVKTTDTSTEPG 10069
Query: 94 SLLSESVASSQLDSTSVDKAVPETEDVQASVS 125
+ LS +++ + ++ + + +TE + S S
Sbjct: 10070 TSLSPNLSGTSVEILAASEVTTDTEKIHPSSS 10101
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVA 101
+SSN S ++ S+ SES +D S ++ + DS++S+ S SN S S+S
Sbjct: 682 DSSNSSDSSDSSDSSNSSES--SDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSN 739
Query: 102 SSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
SS +S ++ D S + + S + S S
Sbjct: 740 SSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDS 776
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSS--SMQPSPVSNQSLLSES 99
+SSN S +++ S S+S +DGS ++ + DS++S S S SN S S+S
Sbjct: 825 DSSNSSDSSDSSNSSDSSDSS--DSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDS 882
Query: 100 VASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
S++ ++S + D +S S + S+ + S
Sbjct: 883 SDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSS 921
Score = 29.3 bits (64), Expect = 2.5
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 41 QNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESV 100
++ S+ S +++ S S+S +D + + DS SS S S+ S S+S
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSS 605
Query: 101 ASSQL-DSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKN 147
SS DS+ + D S SD++ S+ S N
Sbjct: 606 DSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDN 653
Score = 28.5 bits (62), Expect = 4.2
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVA 101
+SS+ S ++ S+ S+S + S E+ + DS+ S S S+ S S+S +
Sbjct: 670 DSSDSSDSSSSSDSSNSSDSSDSSDSSNS-SESSDSSDSSDSDSSDSSDSSNSNSSDSDS 728
Query: 102 SSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
S+ DS+ + ++ +S S + S+ + S
Sbjct: 729 SNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSS 765
Score = 27.7 bits (60), Expect = 7.2
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDST--SSSMQPSPVSNQSLLSES 99
+SS+ S + S SS SES S ++ DS+ S S S SN S S+S
Sbjct: 612 DSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDS 671
Query: 100 VASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
SS S+S ++ D S + + S + S S
Sbjct: 672 SDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDS 710
Score = 27.7 bits (60), Expect = 7.2
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 42 NSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSS-SMQPSPVSNQSLLSESV 100
+SSN S +++ S SES S + S+ S SS S S SN S S S
Sbjct: 907 DSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS 966
Query: 101 ASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKS 138
SS +S+ + ++ +S S + S+ + S
Sbjct: 967 DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSS 1004
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 48 ISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDS 107
I P +S+ S P + S + S+ S+SSS PSP ++ SV SS
Sbjct: 833 IPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAI--SSVVSS---G 887
Query: 108 TSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKP---KQKKNRCFMC 152
+++ ++P Q + + +P EE + E+ ++ N+ F+C
Sbjct: 888 DNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVC 935
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 48 ISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDS 107
I P +S+ S P + S + S+ S+SSS PSP ++ SV SS
Sbjct: 1034 IPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAI--SSVVSS---G 1088
Query: 108 TSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKP---KQKKNRCFMC 152
+++ ++P Q + + +P EE + E+ ++ N+ F+C
Sbjct: 1089 DNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVC 1136
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 48 ISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDS 107
I P +S+ S P + S + S+ S+SSS PSP ++ SV SS
Sbjct: 1034 IPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAI--SSVVSS---G 1088
Query: 108 TSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKP---KQKKNRCFMC 152
+++ ++P Q + + +P EE + E+ ++ N+ F+C
Sbjct: 1089 DNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVC 1136
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 33.1 bits (74), Expect = 0.17
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 73 EAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPS 132
+++S S+SSS S S+ S S +SS S+S + + +S S ++ S
Sbjct: 572 KSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSES 631
Query: 133 EEQSKSLEKPKQKKNRCFMCRKKVGLTGFE 162
+S+ + +K+R + RK+ +G E
Sbjct: 632 RSRSRGRGHNRDRKHRRSVDRKRRDTSGLE 661
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.122 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,381,356
Number of Sequences: 37866
Number of extensions: 364231
Number of successful extensions: 2379
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 2068
Number of HSP's gapped (non-prelim): 531
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.