Guide to the Human Genome
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Name: KLHDC4 Sequence: fasta or formatted (520aa) NCBI GI: 21314675
Description:

kelch domain containing 4

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         30           2
 C cysteine            1.3          7           1
 D aspartate           5.8         30           2
 E glutamate          10.0         52           5
 F phenylalanine       3.8         20           2
 G glycine            10.8         56           3
 H histidine           2.3         12           1
 I isoleucine          1.3          7           1
 K lysine              7.5         39           3
 L leucine             6.7         35           2
 M methionine          2.1         11           1
 N asparagine          2.3         12           1
 P proline             6.3         33           3
 Q glutamine           3.8         20           1
 R arginine            5.6         29           3
 S serine              6.7         35           1
 T threonine           5.6         29           1
 V valine              6.9         36           3
 W tryptophan          2.1         11           1
 Y tyrosine            3.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch domain containing 4 
KLHDC2                0.054   kelch domain containing 2 
RABEPK                0.049   Rab9 effector protein with kelch motifs 
KLHDC3                0.042   kelch domain containing 3 
MEGF8                 0.042   multiple EGF-like-domains 8 
FBXO42                0.038   F-box protein 42 
KLHDC10               0.038   kelch domain containing 10 
HCFC1                 0.036   host cell factor 1 
HCFC2                 0.036   host cell factor C2 
KLHDC1                0.030   kelch domain containing 1 
LZTR1                 0.025   leucine-zipper-like transcription regulator 1 
ATRNL1                0.019   attractin-like 1 
MKLN1                 0.014   muskelin 1, intracellular mediator containing kelch ...
MKLN1                 0.014   muskelin 1, intracellular mediator containing kelch...
HUWE1                 0.013   HECT, UBA and WWE domain containing 1 
LOC390748             0.010   similar to poly(A)binding protein nuclear-like 1 [H...
IVNS1ABP              0.009   influenza virus NS1A binding protein 
CENPB                 0.009   centromere protein B 
COL18A1               0.009   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.009   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.009   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
KLHL4                 0.008   kelch-like 4 isoform 2 
KLHL4                 0.008   kelch-like 4 isoform 1 
SYK                   0.008   spleen tyrosine kinase isoform 2 
SYK                   0.008   spleen tyrosine kinase isoform 1 
ATRN                  0.008   attractin isoform 2 
ATRN                  0.008   attractin isoform 1 
KLHL34                0.008   kelch-like 34 
NSBP1                 0.008   nucleosomal binding protein 1 
PAF1                  0.008   Paf1, RNA polymerase II associated factor, homolog [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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