Guide to the Human Genome
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Name: KLHDC2 Sequence: fasta or formatted (406aa) NCBI GI: 7657301
Description:

kelch domain containing 2

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         21           2
 C cysteine            2.7         11           1
 D aspartate           5.7         23           2
 E glutamate           5.7         23           2
 F phenylalanine       5.2         21           2
 G glycine             8.4         34           2
 H histidine           4.4         18           2
 I isoleucine          3.7         15           1
 K lysine              3.9         16           2
 L leucine             8.4         34           2
 M methionine          2.0          8           1
 N asparagine          5.7         23           2
 P proline             5.2         21           2
 Q glutamine           2.2          9           1
 R arginine            5.4         22           1
 S serine              8.4         34           2
 T threonine           4.9         20           2
 V valine              5.9         24           1
 W tryptophan          3.7         15           1
 Y tyrosine            3.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch domain containing 2 
KLHDC1                0.380   kelch domain containing 1 
HCFC2                 0.084   host cell factor C2 
RABEPK                0.076   Rab9 effector protein with kelch motifs 
HCFC1                 0.075   host cell factor 1 
KLHDC3                0.069   kelch domain containing 3 
KLHDC4                0.067   kelch domain containing 4 
KLHDC10               0.065   kelch domain containing 10 
FBXO42                0.055   F-box protein 42 
LZTR1                 0.054   leucine-zipper-like transcription regulator 1 
MEGF8                 0.026   multiple EGF-like-domains 8 
KLHDC9                0.022   kelch/ankyrin repeat containing cyclin A1 interactin...
KLHDC8A               0.020   kelch domain containing 8A 
KLHL18                0.018   kelch-like 18 
KLHL13                0.016   kelch-like 13 
KLHL9                 0.015   kelch-like 9 
LCMT2                 0.013   leucine carboxyl methyltransferase 2 
KLHL23                0.013   kelch-like 23 
KLHL33                0.012   kelch-like 33 
MKLN1                 0.011   muskelin 1, intracellular mediator containing kelch ...
MKLN1                 0.011   muskelin 1, intracellular mediator containing kelch...
KLHDC9                0.011   kelch/ankyrin repeat containing cyclin A1 interactin...
KLHL32                0.011   kelch-like 32 
KLHL1                 0.011   kelch-like 1 protein 
KLHL38                0.009   kelch-like 38 
KLHL4                 0.009   kelch-like 4 isoform 1 
KLHL20                0.009   kelch-like 20 
KLHL22                0.009   kelch-like 
KLHDC5                0.008   kelch domain containing 5 
IVNS1ABP              0.008   influenza virus NS1A binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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