Guide to the Human Genome
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Name: LZTR1 Sequence: fasta or formatted (840aa) NCBI GI: 47717139
Description:

leucine-zipper-like transcription regulator 1

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         69           3
 C cysteine            2.6         22           2
 D aspartate           5.4         45           1
 E glutamate           6.7         56           2
 F phenylalanine       5.2         44           1
 G glycine             6.5         55           2
 H histidine           2.7         23           2
 I isoleucine          4.2         35           2
 K lysine              4.4         37           2
 L leucine             8.7         73           3
 M methionine          2.4         20           2
 N asparagine          3.1         26           2
 P proline             5.5         46           4
 Q glutamine           4.8         40           2
 R arginine            6.3         53           2
 S serine              6.4         54           2
 T threonine           4.5         38           2
 V valine              7.1         60           2
 W tryptophan          1.3         11           1
 Y tyrosine            3.9         33           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-zipper-like transcription regulator 1 
KLHDC10               0.044   kelch domain containing 10 
KLHDC1                0.036   kelch domain containing 1 
HCFC2                 0.034   host cell factor C2 
RABEPK                0.033   Rab9 effector protein with kelch motifs 
RCBTB1                0.032   regulator of chromosome condensation (RCC1) and BTB ...
HCFC1                 0.031   host cell factor 1 
KLHDC3                0.029   kelch domain containing 3 
KBTBD2                0.028   kelch repeat and BTB (POZ) domain containing 2 [Hom...
KLHDC2                0.027   kelch domain containing 2 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOPL                 0.024   speckle-type POZ protein-like 
KLHL24                0.024   DRE1 protein 
RCBTB2                0.024   regulator of chromosome condensation and BTB domain c...
MEGF8                 0.024   multiple EGF-like-domains 8 
KLHL12                0.024   kelch-like 12 
KLHL18                0.023   kelch-like 18 
FBXO42                0.022   F-box protein 42 
KLHDC4                0.021   kelch domain containing 4 
KLHL10                0.021   kelch-like 10 
ATRNL1                0.020   attractin-like 1 
KBTBD4                0.019   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD4                0.019   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD3                0.019   BTB and kelch domain containing 3 
KBTBD3                0.019   BTB and kelch domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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