Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 210147522
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
(1215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 2456 0.0
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens] 1726 0.0
gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens] 781 0.0
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 186 9e-47
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 68 6e-11
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 68 6e-11
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 68 6e-11
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 64 1e-09
gi|109255251 loricrin [Homo sapiens] 63 1e-09
gi|12707580 paired-like homeobox 2b [Homo sapiens] 62 3e-09
gi|195972866 keratin 10 [Homo sapiens] 58 5e-08
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 57 1e-07
gi|109452587 family with sequence similarity 98, member B isofor... 56 2e-07
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 55 5e-07
gi|89257348 homeo box HB9 [Homo sapiens] 54 9e-07
gi|24432032 zinc finger protein 503 [Homo sapiens] 52 3e-06
gi|119220564 one cut domain, family member 2 [Homo sapiens] 52 3e-06
gi|33188461 GATA binding protein 4 [Homo sapiens] 52 4e-06
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 52 4e-06
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 52 4e-06
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 52 4e-06
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 52 4e-06
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 52 4e-06
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 52 4e-06
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 52 4e-06
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 52 4e-06
gi|23510368 homeobox D11 [Homo sapiens] 51 6e-06
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens] 51 6e-06
gi|73476377 LBXCOR1 homolog [Homo sapiens] 51 6e-06
gi|84570137 homeobox B3 [Homo sapiens] 51 8e-06
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 2456 bits (6364), Expect = 0.0
Identities = 1215/1215 (100%), Positives = 1215/1215 (100%)
Query: 1 MAERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG 60
MAERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG
Sbjct: 1 MAERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG 60
Query: 61 AALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSERE 120
AALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSERE
Sbjct: 61 AALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSERE 120
Query: 121 ICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAA 180
ICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAA
Sbjct: 121 ICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAA 180
Query: 181 AAAAGAGAPSVGAAGAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQS 240
AAAAGAGAPSVGAAGAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQS
Sbjct: 181 AAAAGAGAPSVGAAGAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQS 240
Query: 241 EPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLF 300
EPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLF
Sbjct: 241 EPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLF 300
Query: 301 QMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENC 360
QMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENC
Sbjct: 301 QMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENC 360
Query: 361 WHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMAD 420
WHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMAD
Sbjct: 361 WHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMAD 420
Query: 421 PRLSLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPW 480
PRLSLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPW
Sbjct: 421 PRLSLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPW 480
Query: 481 EDGNHGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLY 540
EDGNHGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLY
Sbjct: 481 EDGNHGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLY 540
Query: 541 TNYCYHDDTENSLFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQ 600
TNYCYHDDTENSLFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQ
Sbjct: 541 TNYCYHDDTENSLFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQ 600
Query: 601 QKQLEMFRTQKKELPHKNITSITNLEGWVGHPLDPVGTLFSSLMEACRIDDENLSGFSDF 660
QKQLEMFRTQKKELPHKNITSITNLEGWVGHPLDPVGTLFSSLMEACRIDDENLSGFSDF
Sbjct: 601 QKQLEMFRTQKKELPHKNITSITNLEGWVGHPLDPVGTLFSSLMEACRIDDENLSGFSDF 660
Query: 661 TENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEE 720
TENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEE
Sbjct: 661 TENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEE 720
Query: 721 QLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPH 780
QLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPH
Sbjct: 721 QLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPH 780
Query: 781 DAELAYKIALRAMRLLVLESTAPSGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELAST 840
DAELAYKIALRAMRLLVLESTAPSGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELAST
Sbjct: 781 DAELAYKIALRAMRLLVLESTAPSGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELAST 840
Query: 841 MLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGL 900
MLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGL
Sbjct: 841 MLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGL 900
Query: 901 QVMRMTLSTLNWRRREMVRWLVTCATEVGVYALDSIMQTWFTLFTPTEATSIVATTVMSN 960
QVMRMTLSTLNWRRREMVRWLVTCATEVGVYALDSIMQTWFTLFTPTEATSIVATTVMSN
Sbjct: 901 QVMRMTLSTLNWRRREMVRWLVTCATEVGVYALDSIMQTWFTLFTPTEATSIVATTVMSN 960
Query: 961 STIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDA 1020
STIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDA
Sbjct: 961 STIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDA 1020
Query: 1021 ATTGMSYTQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSH 1080
ATTGMSYTQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSH
Sbjct: 1021 ATTGMSYTQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSH 1080
Query: 1081 SLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQ 1140
SLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQ
Sbjct: 1081 SLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQ 1140
Query: 1141 LLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIY 1200
LLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIY
Sbjct: 1141 LLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIY 1200
Query: 1201 KGKKKLMMLVRERFG 1215
KGKKKLMMLVRERFG
Sbjct: 1201 KGKKKLMMLVRERFG 1215
>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
Length = 1185
Score = 1726 bits (4469), Expect = 0.0
Identities = 876/1208 (72%), Positives = 988/1208 (81%), Gaps = 42/1208 (3%)
Query: 10 PAKRLCCRPGGGGGGG-GSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPP 68
PAKR C P GS G GG GG S+C LG P
Sbjct: 18 PAKRQCSWPSPQAHHPRGSPGAAGGGAGGVGSSC------------------LVLGARP- 58
Query: 69 GKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFN 128
P+SLLD AA+ VAEKW ++RVEERFERIPEPVQRRIVYWSFPR+EREICMYSSF
Sbjct: 59 --HLQPDSLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYSSFQ 116
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
GGPG +G GGA G P +AA +A AA A+ AGAGA
Sbjct: 117 ----YRGGPG--AGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGA 170
Query: 189 PSVGAAGAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQSEPETVCNV 248
G G LPFRRGI LL+SG V+NVLQVGFHLSGTVTE A SEP V
Sbjct: 171 AGCGGEG---------LPFRRGIRLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKV 221
Query: 249 AISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQ 308
AISFDRCKITSVTC CGNKDIFYCAHVVALSLYRIRKPDQVKL LPISETLFQMNRDQLQ
Sbjct: 222 AISFDRCKITSVTCGCGNKDIFYCAHVVALSLYRIRKPDQVKLRLPISETLFQMNRDQLQ 281
Query: 309 KFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQV 368
KF+QYLIT HHTEVLPTAQKLADEILS NSEINQV+GAPDPTAGASIDDENCWHLDEEQV
Sbjct: 282 KFIQYLITAHHTEVLPTAQKLADEILSSNSEINQVNGAPDPTAGASIDDENCWHLDEEQV 341
Query: 369 QEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLSLWRQ 428
+EQVKLFLSQGGY GSGKQLN +FAKVREML+MRDSNGARMLTLITEQF+ADPRL+LWRQ
Sbjct: 342 KEQVKLFLSQGGYCGSGKQLNSMFAKVREMLRMRDSNGARMLTLITEQFVADPRLTLWRQ 401
Query: 429 QGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPWEDGNHGSE 488
QGT MTDK RQLWDELGALW+CI+LNPHCKLE+K+ WL+QL+KW+ +DVCP EDGN+G E
Sbjct: 402 QGTNMTDKCRQLWDELGALWVCIILNPHCKLEEKSCWLQQLQKWSDLDVCPLEDGNYGHE 461
Query: 489 LPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLYTNYCYHDD 548
LPN+TNALPQ A + DS +RP RTVFTRAIE +LHWQDSHLQ IISSD+YT +
Sbjct: 462 LPNITNALPQSAIHSPDSLSRPRRTVFTRAIEGRELHWQDSHLQRIISSDVYTAPACQRE 521
Query: 549 TENSLFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQQKQLEMFR 608
+E LF+S+G PLW EHVPTACARVDALRSHGYP+EALRL +AI+NTLR QQQ+QLE+++
Sbjct: 522 SERLLFNSQGQPLWLEHVPTACARVDALRSHGYPKEALRLTVAIINTLRLQQQRQLEIYK 581
Query: 609 TQKKELPHKNITSITNLEGWVGHPLDPVGTLFSSLMEACRIDDENLSGFSDFTENMGQCK 668
QKKEL + T+ITNLEGWVGHPLDP+ LF +L EACR++D+ SD M + +
Sbjct: 582 HQKKELLQRGTTTITNLEGWVGHPLDPIDCLFLTLTEACRLNDDGYLEMSD----MNESR 637
Query: 669 SLEYQHLP-AHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEEQLISKLQ 727
YQH+P A ESYL+LA+EVAL+GLGQQR+MP+GLY Q+KVCRNEEQL+S+LQ
Sbjct: 638 PPVYQHVPVAAGSPNSSESYLSLALEVALMGLGQQRLMPEGLYAQDKVCRNEEQLLSQLQ 697
Query: 728 EIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELAYK 787
E++LDD LV+ +KQ + LLE GP+SGLGE+IHRESVPMHTFAKYLF++LLPHD +L+YK
Sbjct: 698 ELQLDDELVQTLQKQCILLLEGGPFSGLGEVIHRESVPMHTFAKYLFSALLPHDPDLSYK 757
Query: 788 IALRAMRLLVLESTAPSGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELASTMLTAAKG 847
+ALRAMRL VLE++A +GD + PHH+ SVVP+RYPRWFTL H+ESQQCELASTMLTAAKG
Sbjct: 758 LALRAMRLPVLENSASAGDTSHPHHMVSVVPSRYPRWFTLGHLESQQCELASTMLTAAKG 817
Query: 848 DVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTL 907
D RL T+LE+IQK+IHSSS IFKLAQDAFKIAT DS D TLL V+LELGLQVMRMTL
Sbjct: 818 DTLRLRTILEAIQKHIHSSSLIFKLAQDAFKIATPTDSSTDSTLLNVALELGLQVMRMTL 877
Query: 908 STLNWRRREMVRWLVTCATEVGVYALDSIMQTWFTLFTPTEATSIVATTVMSNSTIVRLH 967
STLNWRRREMVRWLVTCATEVGV AL SI+Q+W+TLFTPTEATSIVA T +S++TI+RL
Sbjct: 878 STLNWRRREMVRWLVTCATEVGVRALVSILQSWYTLFTPTEATSIVAATAVSHTTILRLS 937
Query: 968 LDCHQQEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSY 1027
LD Q+E+LAS ARTLALQCAMKDPQ+CALSALTLCEKDHIAFE AYQI +DAA GM++
Sbjct: 938 LDYPQREELASCARTLALQCAMKDPQSCALSALTLCEKDHIAFEAAYQIAIDAAAGGMTH 997
Query: 1028 TQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNEL 1087
+QLFTIARYME RGYP+RA+KLA+LAM+HLNL+YNQDTHPAINDVLWACALSHSLGKNEL
Sbjct: 998 SQLFTIARYMELRGYPLRAFKLASLAMSHLNLAYNQDTHPAINDVLWACALSHSLGKNEL 1057
Query: 1088 AAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIG 1147
AA+IPLVVKSV CATVLSDILRRCT+T PG+ G+ GRR+SGKLMS DKAPLRQLLDATI
Sbjct: 1058 AALIPLVVKSVHCATVLSDILRRCTVTAPGLAGIPGRRSSGKLMSTDKAPLRQLLDATIN 1117
Query: 1148 AYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLM 1207
AYINTTHSRLTHISPRHY EFIEFLSKARETFL+ DGH+QF QFIDNLKQIYKGKKKLM
Sbjct: 1118 AYINTTHSRLTHISPRHYGEFIEFLSKARETFLLPQDGHLQFAQFIDNLKQIYKGKKKLM 1177
Query: 1208 MLVRERFG 1215
+LVRERFG
Sbjct: 1178 LLVRERFG 1185
Score = 35.8 bits (81), Expect = 0.25
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 8 PPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLP 67
P + +C GG +G GGA G + P P G AA A + GG A G P
Sbjct: 103 PRNEREICMYSSFQYRGGPGAGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASP 162
Score = 34.7 bits (78), Expect = 0.57
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 17/58 (29%)
Query: 2 AERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGG 59
AE G QPPP G++ G A GG ++ PG G A AA CGG
Sbjct: 135 AEEGPQPPP---------------GAAAPAGSAPGGVAAGASPG--LGAGAGAAGCGG 175
>gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens]
Length = 989
Score = 781 bits (2016), Expect = 0.0
Identities = 384/603 (63%), Positives = 489/603 (81%), Gaps = 7/603 (1%)
Query: 613 ELPHKNITSITNLEGWVGHPLDPVGTLFSSLMEACRIDDENLSGFSDFTENMGQCKSLEY 672
EL K T ITN EGWVGHPLDP+G L +L+EACR+++E L+ + D + + + + Y
Sbjct: 394 ELLQKGSTCITNTEGWVGHPLDPIGCLCRALLEACRLEEETLTLYPD---SGPEKRKVAY 450
Query: 673 QHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEEQLISKLQEIELD 732
QH+P GESYL LA+EVAL+GLGQQR +P+GLY Q+KV RNEEQL++ L+E+ELD
Sbjct: 451 QHVPVPG--SPGESYLVLALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELD 508
Query: 733 DTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELAYKIALRA 792
+ LV++ RKQA LLE GP+SG GE++ RESVPMHT A+YLFT+LLPHD +LAY++ALRA
Sbjct: 509 ERLVQVLRKQAGLLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLALRA 568
Query: 793 MRLLVLESTAPSGDLTRPHHIASVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDVRRL 852
MRL +LE+ P+G+ P + S++ NR+PRWF L H+E++QCELASTMLTAAKGD + L
Sbjct: 569 MRLPILETAFPAGE-PHPSPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWL 627
Query: 853 ETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNW 912
TVL SIQ+NIHS + +FKLAQDA K AT + + PD TLL ++LELGLQVMRMTL+ + W
Sbjct: 628 HTVLGSIQQNIHSPALLFKLAQDACKTATPVSAPPDTTLLGIALELGLQVMRMTLNVMTW 687
Query: 913 RRREMVRWLVTCATEVGVYALDSIMQTWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQ 972
RRREMVRWLV+CATE+G AL +IMQ W++LFTP EA +IVA T +++T++RL LD +
Sbjct: 688 RRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDTSR 747
Query: 973 QEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYTQLFT 1032
+E+L + ARTLALQCAMKDPQNCAL ALTLCEK+H AFE AYQIVLDAA G+ + LFT
Sbjct: 748 REELWACARTLALQCAMKDPQNCALPALTLCEKNHSAFEAAYQIVLDAAAGGLGHAHLFT 807
Query: 1033 IARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIP 1092
+ARYMEHRG P+RAYKLATLA+ L++++NQD+HPA+NDVLWAC+LSHSLG++EL+AI+P
Sbjct: 808 VARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVP 867
Query: 1093 LVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINT 1152
L+++S+ CA +LSDILRR TL+ PG+ G G R + K + D+APL QLLDA + AYI T
Sbjct: 868 LIIRSIHCAPMLSDILRRWTLSAPGL-GPLGARRAAKPLGADRAPLCQLLDAAVTAYITT 926
Query: 1153 THSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRE 1212
+HSRLTHISPRHY +FIEFL KARETFL+A DGH+QF+QF++NLKQ YKGKKKLM+LVRE
Sbjct: 927 SHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFSQFLENLKQTYKGKKKLMLLVRE 986
Query: 1213 RFG 1215
RFG
Sbjct: 987 RFG 989
Score = 437 bits (1124), Expect = e-122
Identities = 205/295 (69%), Positives = 245/295 (83%)
Query: 198 DGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISFDRCKI 257
+G + R+PF RG+ LL+SG VD VLQVGFHLSG + EP EPE + +V+ISFDRCKI
Sbjct: 91 EGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIREPGSPGEPERLYHVSISFDRCKI 150
Query: 258 TSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITV 317
TSV+C C N+D+FYCAHVVALSLYRIR QV+L LPISETL QMNRDQLQKFVQYLI+
Sbjct: 151 TSVSCGCDNRDLFYCAHVVALSLYRIRHAHQVELRLPISETLSQMNRDQLQKFVQYLISA 210
Query: 318 HHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLS 377
HHTEVLPTAQ+LADEIL SEIN V+GAPDPTAGA I+D NCWHLDEEQ+QEQVK LS
Sbjct: 211 HHTEVLPTAQRLADEILLLGSEINLVNGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLS 270
Query: 378 QGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLSLWRQQGTAMTDKY 437
GGY+G+ +QL +F+KVREML+MRDSNGARML L+TEQF+ D RL+LWRQQG MTDK
Sbjct: 271 NGGYYGASQQLRSMFSKVREMLRMRDSNGARMLILMTEQFLQDTRLALWRQQGAGMTDKC 330
Query: 438 RQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPWEDGNHGSELPNL 492
RQLWDELGALW+C+VL+PHCK E++A WL+ L +W+ +DVCP E+GN+ + P+L
Sbjct: 331 RQLWDELGALWVCVVLSPHCKPEERAGWLQLLSRWDKLDVCPLEEGNYSFDGPSL 385
Score = 102 bits (254), Expect = 2e-21
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 12/88 (13%)
Query: 39 SSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERF 98
S C GP A A AA G G PE+LLD++A+RVAE W F++VEERF
Sbjct: 9 SRGCPAGPEERDAGAGAARGRGR------------PEALLDLSAKRVAESWAFEQVEERF 56
Query: 99 ERIPEPVQRRIVYWSFPRSEREICMYSS 126
R+PEPVQ+RIV+WSFPRSEREICMYSS
Sbjct: 57 SRVPEPVQKRIVFWSFPRSEREICMYSS 84
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 186 bits (473), Expect = 9e-47
Identities = 143/487 (29%), Positives = 207/487 (42%), Gaps = 94/487 (19%)
Query: 113 SFPRSEREICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAA 172
SF +C N G G +S GGG GGG GG SA
Sbjct: 29 SFISEAESLCQ----NWRGWRKQSAGPNSPTGGGGGGGSGGTRMRDGLVIPLVELSAKQV 84
Query: 173 AAAAAAAAAAAAGAGAPS-----VGAAGAADGGDETRL----------PFRRGIALLESG 217
A P + + ++ RL F+RG L
Sbjct: 85 AFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGDQLFRMR 144
Query: 218 CVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVA 277
V + LQ+GFHLS TV P + P+ NVA+ FDRC++TS +C+CG +C HVVA
Sbjct: 145 AVKDPLQIGFHLSATVVPPQMVP-PKGAYNVAVMFDRCRVTSCSCTCG-AGAKWCTHVVA 202
Query: 278 LSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEIL-SQ 336
L L+RI V L P+SE+L ++ RDQLQKF QYLI+ ++LPTAQ+L DE+L SQ
Sbjct: 203 LCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQ 262
Query: 337 NSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVK-------------------LFLS 377
++ IN V GAPDPTAG S D++ W+LDE + + +K ++LS
Sbjct: 263 STAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLS 322
Query: 378 QGGYHGSGKQLNL--------------LFAKVREMLKMRDSNGARMLTLITEQFMADPRL 423
+ + L L + VREM K RDSN A +L ++T+Q + ++
Sbjct: 323 STEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLTYEQI 382
Query: 424 SLW--------------------RQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKA 463
+ W Q + DE+ LW VL+P +++
Sbjct: 383 TGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVTLWRLAVLDPALSPQRRR 442
Query: 464 SWLKQLKKWNSVDVCPWEDGNHGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACD 523
QL++W + + G H L L F A+EAC
Sbjct: 443 ELCTQLRQWQLKVIENVKRGQHKKTLERLFPG-------------------FRPAVEACY 483
Query: 524 LHWQDSH 530
+W++++
Sbjct: 484 FNWEEAY 490
Score = 55.8 bits (133), Expect = 2e-07
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 1046 AYKLATLAMTHLNLSYNQD-------THPAINDVLWACALSHSLGKNELAAIIPLVVKSV 1098
AY++ LA+ L + D + P +DV W L+ LG N + K V
Sbjct: 1672 AYRVGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGV 1731
Query: 1099 KCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLT 1158
VL +I+ T + H + L QL+ AY+ H RL
Sbjct: 1732 LSPFVLQEIVME---TLQRLSPAHAHNH------LRAPAFHQLVQRCQQAYMQYIHHRLI 1782
Query: 1159 HISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKK 1204
H++P Y +F+ + AR F + G +QF + NLK+ + K+
Sbjct: 1783 HLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKE 1828
Score = 54.3 bits (129), Expect = 7e-07
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 36 GGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVE 95
G + P GG + G GL+ P L++++A++VA PF+ VE
Sbjct: 43 GWRKQSAGPNSPTGGGGGGGSGGTRMRDGLVIP--------LVELSAKQVAFHIPFEVVE 94
Query: 96 ERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGGPGD 139
+ + +PE +Q RI +WSFP +E +I +YS G GD
Sbjct: 95 KVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGD 138
Score = 37.4 bits (85), Expect = 0.088
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 887 PDITLLKVSLELGLQVMRM-TLSTLNWRRREM---VRWLVTCATEVGVYALDSIMQTWFT 942
P L + E+GL + + + NW R V W+ A E+G AL +++ W
Sbjct: 1278 PHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDG 1337
Query: 943 LFTPTEATSIVATTVMSNSTIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALS---- 998
TP E S+ + + + +A LAL C P AL+
Sbjct: 1338 HLTPPEVASLADRASRA------------RDSNMVRAAAELALSCL---PHAHALNPNEI 1382
Query: 999 --ALTLC-EKDHIAFETAYQIVLDAATTGMSYTQ-LFTIA 1034
AL C E+D++ E A V +AA G Y + LF +A
Sbjct: 1383 QRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVA 1422
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 67.8 bits (164), Expect = 6e-11
Identities = 73/222 (32%), Positives = 85/222 (38%), Gaps = 45/222 (20%)
Query: 2 AERGQQPPPAKRLCCRPG---------GGGGGGGSSGGGGGA------------GGGYSS 40
A GQ PP L +PG G GG G GA GGG +
Sbjct: 108 AAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPA 167
Query: 41 ACRPGPRAGGAAAAAACGGGAALGLL--PPGKTQSPESLLDIAARRVAEKWPFQRVEERF 98
A G+AA A+ G G G G QSP + +A A P
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM----- 222
Query: 99 ERIPEPVQRRIVYWSFPRSE-REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSS 157
+P+Q + +P S+ YS GGG GG G GG GG GGGGG G
Sbjct: 223 ----DPLQNS--HEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGGGGGGGGAG--- 272
Query: 158 SPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADG 199
A A A AAAAAAAAAAA G G G + A G
Sbjct: 273 ------AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Score = 58.2 bits (139), Expect = 5e-08
Identities = 57/201 (28%), Positives = 72/201 (35%), Gaps = 21/201 (10%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG---------AALGLLPPG 69
GGGGGGGGS GGGGG G G A A AAAAAA GGG A G+L
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Query: 70 KTQS-----------PESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSE 118
+ Q SL AA A + + + P +++ P
Sbjct: 314 RQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMR 373
Query: 119 REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAA 178
Y +++ P AG GG +++ A AAA+ A
Sbjct: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAW 432
Query: 179 AAAAAAGAGAPSVGAAGAADG 199
AAA A S G G G
Sbjct: 433 AAAQQRSHPAMSPGTPGPTMG 453
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 67.8 bits (164), Expect = 6e-11
Identities = 73/222 (32%), Positives = 85/222 (38%), Gaps = 45/222 (20%)
Query: 2 AERGQQPPPAKRLCCRPG---------GGGGGGGSSGGGGGA------------GGGYSS 40
A GQ PP L +PG G GG G GA GGG +
Sbjct: 108 AAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPA 167
Query: 41 ACRPGPRAGGAAAAAACGGGAALGLL--PPGKTQSPESLLDIAARRVAEKWPFQRVEERF 98
A G+AA A+ G G G G QSP + +A A P
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM----- 222
Query: 99 ERIPEPVQRRIVYWSFPRSE-REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSS 157
+P+Q + +P S+ YS GGG GG G GG GG GGGGG G
Sbjct: 223 ----DPLQNS--HEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGGGGGGGGAG--- 272
Query: 158 SPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADG 199
A A A AAAAAAAAAAA G G G + A G
Sbjct: 273 ------AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Score = 58.2 bits (139), Expect = 5e-08
Identities = 57/201 (28%), Positives = 72/201 (35%), Gaps = 21/201 (10%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG---------AALGLLPPG 69
GGGGGGGGS GGGGG G G A A AAAAAA GGG A G+L
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Query: 70 KTQS-----------PESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSE 118
+ Q SL AA A + + + P +++ P
Sbjct: 314 RQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMR 373
Query: 119 REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAA 178
Y +++ P AG GG +++ A AAA+ A
Sbjct: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAW 432
Query: 179 AAAAAAGAGAPSVGAAGAADG 199
AAA A S G G G
Sbjct: 433 AAAQQRSHPAMSPGTPGPTMG 453
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 67.8 bits (164), Expect = 6e-11
Identities = 73/222 (32%), Positives = 85/222 (38%), Gaps = 45/222 (20%)
Query: 2 AERGQQPPPAKRLCCRPG---------GGGGGGGSSGGGGGA------------GGGYSS 40
A GQ PP L +PG G GG G GA GGG +
Sbjct: 108 AAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPA 167
Query: 41 ACRPGPRAGGAAAAAACGGGAALGLL--PPGKTQSPESLLDIAARRVAEKWPFQRVEERF 98
A G+AA A+ G G G G QSP + +A A P
Sbjct: 168 AVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM----- 222
Query: 99 ERIPEPVQRRIVYWSFPRSE-REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSS 157
+P+Q + +P S+ YS GGG GG G GG GG GGGGG G
Sbjct: 223 ----DPLQNS--HEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGGGGGGGGAG--- 272
Query: 158 SPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADG 199
A A A AAAAAAAAAAA G G G + A G
Sbjct: 273 ------AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
Score = 58.2 bits (139), Expect = 5e-08
Identities = 57/201 (28%), Positives = 72/201 (35%), Gaps = 21/201 (10%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG---------AALGLLPPG 69
GGGGGGGGS GGGGG G G A A AAAAAA GGG A G+L
Sbjct: 254 GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Query: 70 KTQS-----------PESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSE 118
+ Q SL AA A + + + P +++ P
Sbjct: 314 RQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMR 373
Query: 119 REICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAA 178
Y +++ P AG GG +++ A AAA+ A
Sbjct: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAW 432
Query: 179 AAAAAAGAGAPSVGAAGAADG 199
AAA A S G G G
Sbjct: 433 AAAQQRSHPAMSPGTPGPTMG 453
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 63.5 bits (153), Expect = 1e-09
Identities = 55/169 (32%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 8 PPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLP 67
P A L PGGGGGG SGGGGG G G GG + ++ GAAL L
Sbjct: 70 PEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPGLLVGSAGVGGDPSLSSLPAGAAL-CLK 128
Query: 68 PGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEP--VQRRIVYWSFPRSEREICMYS 125
G++ S S +A E+ P + R E + R + + S
Sbjct: 129 YGESASRGS---VAESSGGEQSPDDDSDGRCELVLRAGVADPRASPGAGGGGAKAAEGCS 185
Query: 126 SFNTGGGAAGGPGDDSGGGGG------AGGGGGGGSSSSPAATSAAATS 168
+ + GGA+ PG GGGGG +GGGGG GS S +++S++++S
Sbjct: 186 NAHLHGGASVPPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSS 234
Score = 40.0 bits (92), Expect = 0.014
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG G G GGGGG G G S+ + ++ A AA +A+ G+ A
Sbjct: 81 GGGGGGSAGSGGGGGGGVGVPGLLVGSAGVGGDPSLSSLPAGAALCLKYGESASRGSVAE 140
Query: 190 SVGAAGAADGGDETR--LPFRRGIA 212
S G + D + R L R G+A
Sbjct: 141 SSGGEQSPDDDSDGRCELVLRAGVA 165
Score = 38.1 bits (87), Expect = 0.051
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 23/195 (11%)
Query: 18 PGGGGGG-------------GGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
PG GGGG GG+S GG GGG G GG + + GG ++
Sbjct: 171 PGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSS 230
Query: 65 LLPPGKTQSPESL-LDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICM 123
K++ ++L L+I AR +R+ + + + E R ++ ++ S R++
Sbjct: 231 SSSSKKSKEQKALRLNINARE------RRRMHDLNDALDE--LRAVIPYAHSPSVRKLSK 282
Query: 124 YSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAA 183
++ G + S A+ ++A +AAAAAA A A
Sbjct: 283 IATLLLAKNYILMQAQALEEMRRLVAYLNQGQAISAASLPSSAAAAAAAAALHPALGAYE 342
Query: 184 AGAGAP-SVGAAGAA 197
AG P S G AA
Sbjct: 343 QAAGYPFSAGLPPAA 357
Score = 36.2 bits (82), Expect = 0.20
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 122 CMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPA--ATSAAATSAAAAAAAAAAA 179
C + G G P GGG GGGGGG P SA + ++ A A
Sbjct: 64 CFEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPGLLVGSAGVGGDPSLSSLPAGA 123
Query: 180 AAAAAGAGAPSVGAAGAADGGDET 203
A + S G+ + GG+++
Sbjct: 124 ALCLKYGESASRGSVAESSGGEQS 147
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 63.2 bits (152), Expect = 1e-09
Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 53/187 (28%)
Query: 16 CRPGGGGGGGGSSGGGGG---AGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQ 72
C+ GG GGSSGGG G +GGG S C G GG+ GG+ G
Sbjct: 158 CQSYGGVSSGGSSGGGSGCFSSGGGGGSVC--GYSGGGSGCGGGSSGGSGSGY------- 208
Query: 73 SPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGG 132
+++++V + P+P Y ++GGG
Sbjct: 209 -------VSSQQVTQT----------SCAPQP------------------SYGGGSSGGG 233
Query: 133 AAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVG 192
+GG G S GGGG G GGGSS + + + ++ G G SVG
Sbjct: 234 GSGGSGCFSSGGGGGSSGCGGGSS------GIGSGCIISGGGSVCGGGSSGGGGGGSSVG 287
Query: 193 AAGAADG 199
+G+ G
Sbjct: 288 GSGSGKG 294
Score = 53.9 bits (128), Expect = 9e-07
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 1 MAERGQQPPPAKRLCC--RPGGGGGGGGSSGGG------GGAGGGYSSACRPGPRAGGAA 52
M+ + +QP P + C GGGGGGGGS GGG GG+GGG SS G GG
Sbjct: 1 MSYQKKQPTPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGG-SSGSGCGYSGGGGY 59
Query: 53 AAAACGGGAALG 64
+ CGGG++ G
Sbjct: 60 SGGGCGGGSSGG 71
Score = 52.8 bits (125), Expect = 2e-06
Identities = 58/226 (25%), Positives = 77/226 (34%), Gaps = 63/226 (27%)
Query: 16 CRPGGGG-----GGGGSSGGG------GGAGGGYSSACRPGPRAGGAAAAAACGG---GA 61
C G GG GGGGSSGGG GG G G S+ G GG+ ++ GG G
Sbjct: 80 CGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGG 139
Query: 62 ALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREI 121
G G F +
Sbjct: 140 GSGCFSSGGG-----------------------------------------GFSGQAVQC 158
Query: 122 CMYSSFNTGGGAAGGPGDDSGGGGG------AGGGGGGGSSSSPAATSAAATSAAAAAAA 175
Y ++GG + GG G S GGGG +GGG G G SS + S +S +
Sbjct: 159 QSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTS 218
Query: 176 AAAAAAAAAGA--GAPSVGAAGAADGGDETRLPFRRGIALLESGCV 219
A + G+ G S G+ + GG G + + SGC+
Sbjct: 219 CAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCI 264
Score = 48.9 bits (115), Expect = 3e-05
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
T GG GG G GG G GGGG GG SS S S + ++ G G
Sbjct: 19 TSGGGGGGGGSGGGGCGFFGGGGSGGGSSG----SGCGYSGGGGYSGGGCGGGSSGGGGG 74
Query: 189 PSVGAAGAADGG 200
+G G GG
Sbjct: 75 GGIGGCGGGSGG 86
Score = 47.0 bits (110), Expect = 1e-04
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 125 SSFNTGGGAAGGPGDDSGG-----GGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAA 179
SS GGG GG G SGG GGG GGG G SS S +S ++ +
Sbjct: 68 SSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSG 127
Query: 180 AAAAAGAGAPSVGAAGAADGG 200
++ G G+ G+ + GG
Sbjct: 128 CFSSGGGGSSGGGSGCFSSGG 148
Score = 46.6 bits (109), Expect = 1e-04
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 122 CMYSSFNTGGGAAGGP--GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAA 179
C YS GGG +GG G SGGGGG G GG GG S S S + +
Sbjct: 51 CGYSG---GGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGS---SGGGSGCF 104
Query: 180 AAAAAGAGAPSVGAAGAADGG 200
++ G+G S G G++ GG
Sbjct: 105 SSGGGGSGCFSSGGGGSSGGG 125
Score = 46.6 bits (109), Expect = 1e-04
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 124 YSSFNTGGGAAGGPGDDSGGGGGAGGG-------GGGGSSSSPAATSAAATSAAAAAAAA 176
YS GGG++GG G GG GG GGG GGG SS + ++ + ++
Sbjct: 59 YSGGGCGGGSSGGGG--GGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSS 116
Query: 177 AAAAAAAAGAGAPSVGAAGAADGG 200
++ G+G S G G++ GG
Sbjct: 117 GGGGSSGGGSGCFSSGGGGSSGGG 140
Score = 44.3 bits (103), Expect = 7e-04
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
+GGG++G SGGGG +GGG GGGSS + + + ++G G+
Sbjct: 42 SGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGS 101
Query: 189 PSVGAAGAADG 199
+ G G
Sbjct: 102 GCFSSGGGGSG 112
Score = 42.4 bits (98), Expect = 0.003
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 20 GGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
GGGGGGG G GGG+GG + G GG+ ++ GGG+
Sbjct: 70 GGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGS 111
Score = 42.0 bits (97), Expect = 0.004
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 19 GGGGGGGGSSG-------GGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
GGGG GGGSSG GGG +GGG G GG CGGG+
Sbjct: 38 GGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGG---GGGGGIGGCGGGS 84
Score = 41.2 bits (95), Expect = 0.006
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 15 CCRPGGGGGGGGSSGGGGGAGGGY-----SSACRPGPRAGGAAAAAACGGGAALGLLPPG 69
C GGGGG G GG G G G S C G GG ++ G G+ G+
Sbjct: 240 CFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVPICH 299
Query: 70 KTQSPES 76
+TQ ++
Sbjct: 300 QTQQKQA 306
Score = 40.0 bits (92), Expect = 0.014
Identities = 19/48 (39%), Positives = 23/48 (47%)
Query: 15 CCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
C GGGGGG GG GG GG G +GG + + GGG +
Sbjct: 64 CGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGS 111
Score = 38.5 bits (88), Expect = 0.039
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 19 GGGGGGGGSSGGGGG-----AGGGYSSACRPG--PRAGGAAAAAACGGGAALG 64
GGGGGG G GGG G +GGG SS G GG + + GGG + G
Sbjct: 71 GGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSG 123
Score = 38.1 bits (87), Expect = 0.051
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 15 CCRPGGGGGGGGSSGGG--GGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
C GGGG GG GGG GG GGG C G +GG+ + GG + G
Sbjct: 51 CGYSGGGGYSGGGCGGGSSGGGGGGGIGGC--GGGSGGSVKYSGGGGSSGGG 100
Score = 37.4 bits (85), Expect = 0.088
Identities = 21/74 (28%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GG GG G GGG G G G G S S ++ G
Sbjct: 27 GGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Query: 190 SV---GAAGAADGG 200
SV G G++ GG
Sbjct: 87 SVKYSGGGGSSGGG 100
Score = 34.7 bits (78), Expect = 0.57
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSP 159
+GGG+ G G GGGGG+ GG G P
Sbjct: 266 SGGGSVCGGGSSGGGGGGSSVGGSGSGKGVP 296
Score = 34.3 bits (77), Expect = 0.74
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 127 FNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGA 186
F GGG+ GG G G GG GGG ++ + + +G
Sbjct: 36 FFGGGGSGGGSSGSGCGYSGGGGYSGGGCGG--GSSGGGGGGGIGGCGGGSGGSVKYSGG 93
Query: 187 GAPSVGAAGAADGG 200
G S G +G G
Sbjct: 94 GGSSGGGSGCFSSG 107
Score = 32.7 bits (73), Expect = 2.2
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 14 LCCRPGGGGGGGGSSGGGGGAGGG 37
+C GGGGGGSS GG G+G G
Sbjct: 271 VCGGGSSGGGGGGSSVGGSGSGKG 294
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 62.0 bits (149), Expect = 3e-09
Identities = 36/69 (52%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 126 SFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAG 185
S GG GGP +G G AG GG GG A +AAA +AAAAAAAAAAAA A
Sbjct: 207 SCGANGGGGGGPSP-AGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAA 265
Query: 186 AGAPSVGAA 194
AG P G A
Sbjct: 266 AGGPGQGWA 274
Score = 56.6 bits (135), Expect = 1e-07
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAA-----------TSAAAAAAAA 176
+T + GGPG + G GGGG SPA AA AAAAAAAA
Sbjct: 189 STDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAA 248
Query: 177 AAAAAAAAGAGAPSVGAAGAADGG 200
AAAAAAAA A A + AAG G
Sbjct: 249 AAAAAAAAAAAAGGLAAAGGPGQG 272
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 5 GQQPPPAKRLCCRPGGGGGGG-------GSSGGGGGAG----GGYSSACRPGPRAGGAAA 53
G P P C GGGGGG G++G GG G GG ++A A AAA
Sbjct: 197 GPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAA 256
Query: 54 AAACGGGAALGLLPPGKTQSP 74
AAA GG AA G PG+ +P
Sbjct: 257 AAAAGGLAAAG--GPGQGWAP 275
Score = 42.0 bits (97), Expect = 0.004
Identities = 32/72 (44%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 128 NTGGGA----AGGPG--DDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAA 181
N GGG AG PG G GG G GG ++++ AA +AA AAAAAA AAA
Sbjct: 211 NGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAA----AAAAAAGGLAAA 266
Query: 182 AAAGAG-APSVG 192
G G AP G
Sbjct: 267 GGPGQGWAPGPG 278
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 58.2 bits (139), Expect = 5e-08
Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 49/149 (32%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLL 78
GGG GGGSSGGG G G G SS G GG++ + GGG G G S
Sbjct: 474 GGGSSGGGSSGGGHGGGHGGSSG---GGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG-- 528
Query: 79 DIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGGPG 138
Y ++GGG G G
Sbjct: 529 --------------------------------------------GYGGGSSGGGGGGYGG 544
Query: 139 DDSGGGGGAGGGGGGGSSSSPAATSAAAT 167
SGGG +GGG GGGSSS +S++ +
Sbjct: 545 GSSGGGSSSGGGYGGGSSSGGHKSSSSGS 573
Score = 48.5 bits (114), Expect = 4e-05
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 116 RSEREICMYSSFNTGGGAAGGPGDDSG-----------GGGGAGGGGGGGSSSSPAATSA 164
R E EI Y S G G++GG G G GGG +GGG GGG S
Sbjct: 441 RLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYG 500
Query: 165 AATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGG 200
+S ++ +++ G G S G G G
Sbjct: 501 GGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSG 536
Score = 46.2 bits (108), Expect = 2e-04
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG++GG G GGG GG GGG + ++ +++ +++ G G
Sbjct: 474 GGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGG 533
Query: 190 SVGAAGAADGG 200
S G G GG
Sbjct: 534 SSGGGGGGYGG 544
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 128 NTGGGAAGGPGDDSGGG---GGAGGG------GGGGSSSSPAATSAAATSAAAAAAAAAA 178
++GGG GG G SGGG G +GGG GGG SS +S+ ++
Sbjct: 482 SSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGG 541
Query: 179 AAAAAAGAGAPSVG--AAGAADGGDET 203
++G G+ S G G++ GG ++
Sbjct: 542 YGGGSSGGGSSSGGGYGGGSSSGGHKS 568
Score = 43.5 bits (101), Expect = 0.001
Identities = 43/154 (27%), Positives = 50/154 (32%), Gaps = 47/154 (30%)
Query: 17 RPGGGGGGGGSSGGGG-----------GAGGGYSSACRPGPR-----AGGAAAAAACGGG 60
R GGGGGGGG GGGG GGG+SS G +GG + GG
Sbjct: 15 RSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGY 74
Query: 61 AALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSERE 120
LG G + SF
Sbjct: 75 GGLGGFGGGSFRGSYGSSSFGGSYGG--------------------------SFGGGS-- 106
Query: 121 ICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGG 154
+ + GGG+ GG G GG GG GGG GG
Sbjct: 107 ---FGGGSFGGGSFGGGGFGGGGFGGGFGGGFGG 137
Score = 42.0 bits (97), Expect = 0.004
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 124 YSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAA 183
Y ++GGG++GG GG GG GGG S + S++ +++
Sbjct: 473 YGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGG 532
Query: 184 AGAGAPSVGAAGAADGG 200
+G G G + GG
Sbjct: 533 GSSGGGGGGYGGGSSGG 549
Score = 41.6 bits (96), Expect = 0.005
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 125 SSFNTGGGAAGGPGDDSGGGGGAGGGGG--GGSSSSPAATSAAATSAAAAAAAAAAAAAA 182
SS GG ++GG G S GGGG G GGG GG SSS ++S ++++ + +
Sbjct: 518 SSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGES 577
Query: 183 AA 184
++
Sbjct: 578 SS 579
Score = 40.8 bits (94), Expect = 0.008
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 19 GGGGGGGGSSGG--GGGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
GGGG GGGS GG GGG+ GG SS G GG++ GG + G
Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGG 507
Score = 40.4 bits (93), Expect = 0.010
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 130 GGGAAGGP-GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
GGG GG G S GGG GG GG +S +S +++ + +G
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGG 529
Query: 189 PSVGAAGAADGG 200
G++G GG
Sbjct: 530 YGGGSSGGGGGG 541
Score = 40.4 bits (93), Expect = 0.010
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 124 YSSFNTGGGAAGGP---GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAA 180
Y ++GGG++GG G SGG GG+ GG GG SS S+ +++
Sbjct: 499 YGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYG 558
Query: 181 AAAAGAGAPSVGAAGAADGGDE 202
++ G S + + +
Sbjct: 559 GGSSSGGHKSSSSGSVGESSSK 580
Score = 38.1 bits (87), Expect = 0.051
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 141 SGGGGGAGG-GGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADG 199
SGGGGG GG GGGGG SS ++S + ++ + + + +G G + G
Sbjct: 16 SGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYG 75
Query: 200 G 200
G
Sbjct: 76 G 76
Score = 38.1 bits (87), Expect = 0.051
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 124 YSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAA 183
+S ++GGG GG GG GG GGG GS S + + S + + +
Sbjct: 57 FSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGS 116
Query: 184 AGAGAPSVGAAGAADGG 200
G G G G GG
Sbjct: 117 FGGGGFGGGGFGGGFGG 133
Score = 34.7 bits (78), Expect = 0.57
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLL 78
GGG GGGS GGG GGG+ GG G G GLL + + ++L
Sbjct: 103 GGGSFGGGSFGGGSFGGGGFG--------GGGFGGGFGGGFGGDGGLLSGNEKVTMQNLN 154
Query: 79 D 79
D
Sbjct: 155 D 155
Score = 34.7 bits (78), Expect = 0.57
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 20 GGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG 60
G G GG GGG GGGY G +GG ++ GGG
Sbjct: 455 GEGSSGGGGRGGGSFGGGYG-----GGSSGGGSSGGGHGGG 490
Score = 34.3 bits (77), Expect = 0.74
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 19 GGGGGGGGSSGG---GGGAGGGYSSACRPGPRAGGAAAAAACGG 59
G G GGG GG GGG GGG S G GG ++ GG
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGG 498
Score = 33.1 bits (74), Expect = 1.7
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 16 CRPGGGGGGGGSSGGGGGA----------GGGYSSACRPGPRAGGAAAAAACGGG 60
C G GG GG G GGG+ GG Y + G GG+ + GGG
Sbjct: 66 CFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGG 120
Score = 32.3 bits (72), Expect = 2.8
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 141 SGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGG 200
S GGG GGGG GG + +++ + ++ + + G+ G G + GG
Sbjct: 14 SRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGG 73
Score = 32.0 bits (71), Expect = 3.7
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 124 YSSFNTGGGAAGGPGDDSGG-------------GGGAGGGGGGGSSSSPAATSAAATSAA 170
YSS +GGG GG GG GGG GG G S S ++ +
Sbjct: 11 YSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGS 70
Query: 171 AAAAAAAAAAAAAAGAGAPSVGAAGAADGG 200
+ + G+ + G + GG
Sbjct: 71 SGGYGGLGGFGGGSFRGSYGSSSFGGSYGG 100
Score = 32.0 bits (71), Expect = 3.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 19 GGGGGG-GGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACG 58
G GGG GG S GGG GGG SS +G +++ G
Sbjct: 541 GYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 57.0 bits (136), Expect = 1e-07
Identities = 44/111 (39%), Positives = 45/111 (40%), Gaps = 43/111 (38%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSS---------------------------SSPAA- 161
G G GGPG G GGG GGGGGGG S PAA
Sbjct: 146 GPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAA 205
Query: 162 ---------------TSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
+AA AAAAAAAAAA AAA A A VGAAG A
Sbjct: 206 AAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLA 256
Score = 55.1 bits (131), Expect = 4e-07
Identities = 42/113 (37%), Positives = 47/113 (41%), Gaps = 40/113 (35%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGG-------------------GSSSSPAATSA------ 164
GGG GGPG GGGGG GGGGGG G S PAA +A
Sbjct: 156 GGGPGGGPG--GGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSG 213
Query: 165 -------------AATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGGDETR 204
A +AAAAAAA AAA+AA A + G A D + R
Sbjct: 214 LPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPR 266
Score = 46.6 bits (109), Expect = 1e-04
Identities = 49/178 (27%), Positives = 60/178 (33%), Gaps = 63/178 (35%)
Query: 19 GGGG-----GGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQS 73
GGGG GGGG GGGGG GG GP GG GGG GLL
Sbjct: 139 GGGGAHDGPGGGGGPGGGGGPGG--------GPGGGGGGGPGGGGGGPGGGLLGGSAH-- 188
Query: 74 PESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGA 133
P P + + S P + + M S G
Sbjct: 189 ----------------------------PHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLV 220
Query: 134 AGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSV 191
A +++ A +AAA +AA AAA+AAAA AG S+
Sbjct: 221 A--------------------AAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASI 258
Score = 40.8 bits (94), Expect = 0.008
Identities = 19/35 (54%), Positives = 20/35 (57%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAA 52
PGGGGG GG GGGGG G G G GG+A
Sbjct: 153 PGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSA 187
Score = 40.0 bits (92), Expect = 0.014
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGG----AAAAAACGGGAALGLLPPG 69
PGGGGGGG GGGG GG + P P + AAA GL PG
Sbjct: 163 PGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPG 218
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 56.2 bits (134), Expect = 2e-07
Identities = 47/150 (31%), Positives = 50/150 (33%), Gaps = 44/150 (29%)
Query: 6 QQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGL 65
+ PP KR GGG GG G GGGGG GGG R G GG GGG G
Sbjct: 321 EMPPWQKRQ--EGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGG 378
Query: 66 LPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYS 125
G + D R
Sbjct: 379 GGGGGRGGFQGRGDYGGR-----------------------------------------G 397
Query: 126 SFNTGGGAAG-GPGDDSGGGGGAGGGGGGG 154
+ GG G G GD GGGGG GGGGGGG
Sbjct: 398 GYGGRGGYGGRGYGDPYGGGGGGGGGGGGG 427
Score = 40.8 bits (94), Expect = 0.008
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 131 GGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPS 190
GG GG G GGGGG GGGGGGG G G P
Sbjct: 360 GGGGGGWGGGGGGGGGWGGGGGGGRGG-----FQGRGDYGGRGGYGGRGGYGGRGYGDPY 414
Query: 191 VGAAGAADGG 200
G G GG
Sbjct: 415 GGGGGGGGGG 424
Score = 40.0 bits (92), Expect = 0.014
Identities = 21/58 (36%), Positives = 24/58 (41%)
Query: 7 QPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
+PPP + + GGGG GGGG GGG G R G GGG G
Sbjct: 316 EPPPPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373
Score = 35.8 bits (81), Expect = 0.25
Identities = 15/24 (62%), Positives = 15/24 (62%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGG 153
GG G P GGGGG GGGGGG
Sbjct: 406 GGRGYGDPYGGGGGGGGGGGGGGG 429
Score = 35.8 bits (81), Expect = 0.25
Identities = 16/21 (76%), Positives = 16/21 (76%), Gaps = 3/21 (14%)
Query: 18 PGGGGGGGGSSGGGGGAGGGY 38
P GGGGGGG GGGG GGGY
Sbjct: 413 PYGGGGGGG---GGGGGGGGY 430
Score = 30.8 bits (68), Expect = 8.2
Identities = 17/63 (26%), Positives = 17/63 (26%)
Query: 138 GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
G GG GG GGGGG G G G G G
Sbjct: 332 GGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRG 391
Query: 198 DGG 200
D G
Sbjct: 392 DYG 394
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 54.7 bits (130), Expect = 5e-07
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 130 GGGAAGGPGD----------DSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAA 179
GG + GGPG + GGGGG GGGG GGS+S P T A+ A
Sbjct: 4 GGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGG---GKASVGAMGGGV 60
Query: 180 AAAAAGAGAPSVGAAGAADGGDETRLP 206
A+++G G G G+ G T P
Sbjct: 61 GASSSGGGPGGSGGGGSGGPGAGTSFP 87
Score = 45.1 bits (105), Expect = 4e-04
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSS---------ACRPGPRAGGAAAAAACGGGAALGLLPPG 69
GGGGG GGS+ G GG GGG +S A G GG+ + G GA PPG
Sbjct: 31 GGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPG 90
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 10/52 (19%)
Query: 19 GGGGGGGG----------SSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGG 60
GGG GG G GGGGG GG SA PG GG A+ A GGG
Sbjct: 8 GGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGG 59
Score = 42.0 bits (97), Expect = 0.004
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 125 SSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAA 184
SSF GG GG G GG GG GGG A+ A A+++ +
Sbjct: 20 SSFAEPGGGGGGGGGGPGGSASGPGGTGGGK----ASVGAMGGGVGASSSGGGPGGSGGG 75
Query: 185 GAGAPSVGAA 194
G+G P G +
Sbjct: 76 GSGGPGAGTS 85
Score = 41.6 bits (96), Expect = 0.005
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 136 GPGDDSGGGGGA------------GGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAA 183
G G GG GG+ GGGGGGG +A+ T A+ A A
Sbjct: 3 GGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGA 62
Query: 184 AGAGAPSVGAAGAADGG 200
+ +G G+ G GG
Sbjct: 63 SSSGGGPGGSGGGGSGG 79
Score = 38.1 bits (87), Expect = 0.051
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG GGPG S G G GGG + A+++ + + AG P
Sbjct: 29 GGGGGGGPGG-SASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFP 87
Query: 190 SVGAAGAADGGDET 203
G D G T
Sbjct: 88 PPGVKLGRDSGKVT 101
Score = 36.2 bits (82), Expect = 0.20
Identities = 34/153 (22%), Positives = 43/153 (28%), Gaps = 50/153 (32%)
Query: 24 GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAAR 83
GGG SGGG G G ++ P GG GG A+ PG T ++ +
Sbjct: 3 GGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSAS----GPGGTGGGKASV----- 53
Query: 84 RVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGGPGDDSGG 143
+ G GA+ G G
Sbjct: 54 -----------------------------------------GAMGGGVGASSSGGGPGGS 72
Query: 144 GGGAGGGGGGGSSSSPAATSAAATSAAAAAAAA 176
GGG GG G G+S P S A
Sbjct: 73 GGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVA 105
Score = 34.7 bits (78), Expect = 0.57
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 144 GGGAGGGGGGGSS---SSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGG 200
GGG GGG GGS +S A +A+ G G SVGA G G
Sbjct: 3 GGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGA 62
Query: 201 DET 203
+
Sbjct: 63 SSS 65
Score = 32.7 bits (73), Expect = 2.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 21 GGGGGGSSGGGGGAGGGYSSACRPGPRAG 49
GGG GGS GGG G G +S PG + G
Sbjct: 66 GGGPGGSGGGGSGGPGAGTSFPPPGVKLG 94
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 53.9 bits (128), Expect = 9e-07
Identities = 32/72 (44%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 RGQQPPPAKRLCC------RPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAAC 57
R + P P + L +PG G GGG G GGG GG + A A AAAAAA
Sbjct: 74 RAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAA 133
Query: 58 GGGAALGLLPPG 69
GG ALGL P G
Sbjct: 134 AGGLALGLHPGG 145
Score = 51.6 bits (122), Expect = 4e-06
Identities = 57/196 (29%), Positives = 68/196 (34%), Gaps = 62/196 (31%)
Query: 2 AERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
A Q P A G GGG GGGGGA GG S +C P AA A
Sbjct: 20 AASAQSAPLALVTSLAAAASGTGGG--GGGGGASGGTSGSCSPASSEPPAAPADRL---- 73
Query: 62 ALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREI 121
+ +SP P + + +P+P
Sbjct: 74 --------RAESPS--------------PPRLLAAHCALLPKP----------------- 94
Query: 122 CMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAA--- 178
G AGG GGGG GG GG + P A +AAA +AAAAAA A
Sbjct: 95 --------GFLGAGG-----GGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGL 141
Query: 179 -AAAAAAGAGAPSVGA 193
A GAG P+ A
Sbjct: 142 HPGGAQGGAGLPAQAA 157
Score = 44.3 bits (103), Expect = 7e-04
Identities = 28/54 (51%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 144 GGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
G G GGGG GG P A +AAAAAAAAAAAAA G GA G A
Sbjct: 98 GAGGGGGGTGGGHGGP-HHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGA 150
Score = 40.8 bits (94), Expect = 0.008
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 133 AAGGPGDDSGGGGGAGGGGGGGSSSSPAATS--AAATSAAAAAAAAAAAAAAAAGAGAPS 190
AA G G GGGGG G GG S SPA++ AA A + + AA A P
Sbjct: 37 AASGTG---GGGGGGGASGGTSGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPK 93
Query: 191 VGAAGAADGGDET 203
G GA GG T
Sbjct: 94 PGFLGAGGGGGGT 106
>gi|24432032 zinc finger protein 503 [Homo sapiens]
Length = 646
Score = 52.4 bits (124), Expect = 3e-06
Identities = 58/249 (23%), Positives = 83/249 (33%), Gaps = 76/249 (30%)
Query: 23 GGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPP-------------- 68
GGGG GGGGGA ++SA G ++ A + +PP
Sbjct: 17 GGGGGGGGGGGADPAWTSALSGNSSGPGPGSSPAGSTKPFVHAVPPSDPLRQANRLPIKV 76
Query: 69 --------GKTQSPESLLDIAARRV------AEKWPFQRVEERFERIPEPVQRRIVYWSF 114
G PE L + + V A+K P + + +I +P
Sbjct: 77 LKMLTARTGHILHPEYLQPLPSTPVSPIELDAKKSPLALLAQTCSQIGKPD--------- 127
Query: 115 PRSEREICMYSSFNTGGGAAGG-------------------------------------- 136
P ++ +S G G AGG
Sbjct: 128 PSPSSKLSSVASNGGGAGGAGGGAAGDKDTKSGPLKLSDIGVEDKSSFKPYSKPGSDKKE 187
Query: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAAT-SAAAAAAAAAAAAAAAAGAGAPSVGAAG 195
PG GGGGG GGGGGG SS +AT + +++A+A G A G
Sbjct: 188 PGGGGGGGGGGGGGGGGVSSEKSGFRVPSATCQPFTPRTGSPSSSASACSPGGMLSSAGG 247
Query: 196 AADGGDETR 204
A +G D+ +
Sbjct: 248 APEGKDDKK 256
Score = 47.4 bits (111), Expect = 8e-05
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 18/74 (24%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSS----------ACRP-GPRAGG-AAAAAACGGGAAL-- 63
PGGGGGGG GGGGG GGG SS C+P PR G +++A+AC G L
Sbjct: 188 PGGGGGGG---GGGGGGGGGVSSEKSGFRVPSATCQPFTPRTGSPSSSASACSPGGMLSS 244
Query: 64 -GLLPPGKTQSPES 76
G P GK ++
Sbjct: 245 AGGAPEGKDDKKDT 258
Score = 35.4 bits (80), Expect = 0.33
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 141 SGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADG- 199
SGGGGG GGGGG A TSA + ++ ++ AG+ P V A +D
Sbjct: 16 SGGGGGGGGGGG---------ADPAWTSALSGNSSGPGPGSSPAGSTKPFVHAVPPSDPL 66
Query: 200 GDETRLPFR 208
RLP +
Sbjct: 67 RQANRLPIK 75
Score = 32.3 bits (72), Expect = 2.8
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 9 PPAKRLCCRPGG--GGGGGGSSG---------GGGGAGGGYSSACRPGPRAGGAAAAAAC 57
P + C PGG GG G GGGG G G +SA G G A +C
Sbjct: 229 PSSSASACSPGGMLSSAGGAPEGKDDKKDTDVGGGGKGTGGASA--EGGPTGLAHGRISC 286
Query: 58 GGG 60
GGG
Sbjct: 287 GGG 289
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 52.0 bits (123), Expect = 3e-06
Identities = 38/111 (34%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 120 EICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAA----- 174
E+ M S G A GG G GGGGG GGGG G A+ S AA +
Sbjct: 23 ELTMESLGTLHGPAGGGSGGGGGGGGGGGGGGPGHEQELLASPSPHHAGRGAAGSLRGPP 82
Query: 175 ---------AAAAAAAAAAGAGAPSVGAAGAADGGD---ETRLPFRRGIAL 213
AAAAAAAA A A DGGD E +P +++
Sbjct: 83 PPPTAHQELGTAAAAAAAASRSAMVTSMASILDGGDYRPELSIPLHHAMSM 133
Score = 43.5 bits (101), Expect = 0.001
Identities = 28/75 (37%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 18 PGGGGGGGGSSGGGGGAGGG----YSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQS 73
P GGG GGG GGGGG GGG P P G AA + G PP T
Sbjct: 35 PAGGGSGGGGGGGGGGGGGGPGHEQELLASPSPHHAGRGAAGSLRGP------PPPPTAH 88
Query: 74 PESLLDIAARRVAEK 88
E AA A +
Sbjct: 89 QELGTAAAAAAAASR 103
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 51.6 bits (122), Expect = 4e-06
Identities = 52/161 (32%), Positives = 61/161 (37%), Gaps = 36/161 (22%)
Query: 20 GGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQS-PESLL 78
GGG G S G GG+ GG +S PG + G + A GAA P S P +
Sbjct: 56 GGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTG 115
Query: 79 DIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGGPG 138
+AA A + RE YSS GGGAAG
Sbjct: 116 SLAAAAAAA-----------------------------AAREAAAYSS---GGGAAGA-- 141
Query: 139 DDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAA 179
G G G GS SSP A A+ AAAAAA+A
Sbjct: 142 -GLAGREQYGRAGFAGSYSSPYPAYMADVGASWAAAAAASA 181
Score = 50.1 bits (118), Expect = 1e-05
Identities = 41/115 (35%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 110 VYWSFPRSEREICMYSSFNTGGGAAGGPGDDSGG--GGGAGGGGGGGSSSSPAATSAAAT 167
VY PR + + S+ GGGA G SGG GG A G G G SP + A A
Sbjct: 37 VYVPTPRVPSSV-LGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGAD 95
Query: 168 ----------------------SAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGG 200
+AAAAAAAA AAA ++G GA G AG G
Sbjct: 96 GAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGREQYG 150
Score = 42.0 bits (97), Expect = 0.004
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 125 SSFNTGGGAAG-GPGDDSGGGGGAGGGGGG---------------GSSSSPAATSAAATS 168
S ++GG A+G GPG G G + G G G++ S AA +AAA +
Sbjct: 67 SGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAA 126
Query: 169 AAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
AAA ++ AA A AG G AG A
Sbjct: 127 REAAAYSSGGGAAGAGLAGREQYGRAGFA 155
Score = 33.9 bits (76), Expect = 0.97
Identities = 22/77 (28%), Positives = 28/77 (36%)
Query: 123 MYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAA 182
MY S PG GG GA G G +SS + S+ + A
Sbjct: 1 MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGAG 60
Query: 183 AAGAGAPSVGAAGAADG 199
+A GA + GAA G
Sbjct: 61 SASGGASGGSSGGAASG 77
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 51.6 bits (122), Expect = 4e-06
Identities = 35/87 (40%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGG-------------------GGGSSSSPAATSAAATSAA 170
GGG GG + GGGGGA GGG GGG S A A
Sbjct: 167 GGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGG 226
Query: 171 AAAAAAAAAAAAAAGAGAPSVGAAGAA 197
AAAAAAA+ AA AGA ++ GAA
Sbjct: 227 GKAAAAAAASFAAEQAGAAALLPLGAA 253
Score = 49.3 bits (116), Expect = 2e-05
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 72 QSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIV----YWSFPRSEREICMYSSF 127
QSP+ ++R+ ++W + ++ I E + R+ Y + R+ +
Sbjct: 80 QSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNA 139
Query: 128 NTGGGAA-----GGPGDDSGGGGGAGGGGGGGSSSSPA------ATSAAATSAAAAAAAA 176
N+ AA G GD GG GG G GGGGG SS A A+ A S A +
Sbjct: 140 NSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSC 199
Query: 177 AAAAAAAAGAGAPSVGA----AGAADGG 200
+ A AG G A AG GG
Sbjct: 200 GSKVAGGAGGGVSKPHAKLILAGGGGGG 227
Score = 48.9 bits (115), Expect = 3e-05
Identities = 54/195 (27%), Positives = 71/195 (36%), Gaps = 71/195 (36%)
Query: 17 RPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPES 76
+PG G G SGGGG GGG GG++ A GGGA+ G G P
Sbjct: 150 KPGEKGDKVGGSGGGGHGGGG----------GGGSSNAGGGGGGASGG----GANSKP-- 193
Query: 77 LLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGG 136
++++ C GGA GG
Sbjct: 194 ----------------------------------------AQKKSC---GSKVAGGAGGG 210
Query: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAA------------AAAA 184
AGGGGGG ++++ AA+ AA + AAA AAA A+A+
Sbjct: 211 VSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASAS 270
Query: 185 GAGAPSVGAAGAADG 199
+ A S AA AA G
Sbjct: 271 ASSAASASAALAAPG 285
Score = 48.1 bits (113), Expect = 5e-05
Identities = 61/213 (28%), Positives = 82/213 (38%), Gaps = 43/213 (20%)
Query: 21 GGGGGGSSGGG----------------GGAGGGYSSA----CRPGPRAGGAAAAAACGGG 60
GGGGGG+SGGG GGAGGG S G GG AAAAA
Sbjct: 178 GGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASF 237
Query: 61 AA-----LGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFP 115
AA LLP G SL AR + + P +
Sbjct: 238 AAEQAGAAALLPLGAAADHHSLYK--ARTPSASASASSAASASAALAAPGKHLA-----E 290
Query: 116 RSEREICMYSSFNTGGGAAGGPG---DDSGGGGGAGGGGGGGSSSSPAAT--SAAATSAA 170
+ + + ++ T GG G D S G G G S +P+ + S+AA+S A
Sbjct: 291 KKVKRVYLFGGLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSPA 350
Query: 171 AAAAA------AAAAAAAAAGAGAPSVGAAGAA 197
A + A+ AA+ A + APS ++ A+
Sbjct: 351 AGRSPADHRGYASLRAASPAPSSAPSHASSSAS 383
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 51.6 bits (122), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG +GG G SG GGG GGGGGGGS+ +P +A+ S +A A++
Sbjct: 78 GGGGSGGGGGSSGNGGG-GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINA 136
Query: 190 SVGAAGAADGGDET 203
S G++ ++ +
Sbjct: 137 STGSSSSSSSSSSS 150
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+TGGG GG GG G GGGGGGG S + AA S + +A +
Sbjct: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
Query: 188 APSVGAAGAADGGDET 203
P + G++ +
Sbjct: 132 TPINASTGSSSSSSSS 147
Score = 48.9 bits (115), Expect = 3e-05
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRA-----GGAAAAAACGGGAA 62
G GGGGG S GGGG GGG S C P A GG + GGG A
Sbjct: 81 GSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVA 129
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 11/75 (14%)
Query: 125 SSFNTGGGAAGGPGDD-----------SGGGGGAGGGGGGGSSSSPAATSAAATSAAAAA 173
SS N GGG GG G + SGGGGG GGG +SS+P S ++S+++++
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 174 AAAAAAAAAAAGAGA 188
+++++++++++ + +
Sbjct: 148 SSSSSSSSSSSSSSS 162
Score = 43.1 bits (100), Expect = 0.002
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 130 GGGAAGGPGDDSGGGGGA------------GGGGGGGSSSSPAATSAAATSAAAAAAAAA 177
GGG++G G GGGGG+ GGGGGG S+ S+ +A+ +++++
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 178 AAAAAAAGAGAPSVGAAGA 196
+++++++ + + S ++ +
Sbjct: 145 SSSSSSSSSSSSSSSSSSS 163
Score = 42.0 bits (97), Expect = 0.004
Identities = 23/69 (33%), Positives = 29/69 (42%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
+ AA GGGGG G GGGGGSS + + AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 189 PSVGAAGAA 197
S G A+
Sbjct: 122 ISAGGGVAS 130
Score = 37.0 bits (84), Expect = 0.11
Identities = 20/70 (28%), Positives = 27/70 (38%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+ AA GGGGG GGGGG S + S AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 188 APSVGAAGAA 197
+ G ++
Sbjct: 122 ISAGGGVASS 131
Score = 36.6 bits (83), Expect = 0.15
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 19 GGGGG----GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGG GGG GGGGG+ + A GG +A GG A+
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
Score = 35.8 bits (81), Expect = 0.25
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 15/59 (25%)
Query: 19 GGGGGGGGS------------SGGGGG---AGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGGGGGS SGGGGG AGGG +S+ G ++++++ ++
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSS 152
Score = 33.9 bits (76), Expect = 0.97
Identities = 15/58 (25%), Positives = 37/58 (63%)
Query: 132 GAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
G+ GG G S GGG A S+ S +++S++++S+++++++++++++ G P
Sbjct: 114 GSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKP 171
Score = 30.8 bits (68), Expect = 8.2
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+T ++G S G +SS P ++AAAAAA + G G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 188 APSVGAAGAADGG 200
G + +GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 51.6 bits (122), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG +GG G SG GGG GGGGGGGS+ +P +A+ S +A A++
Sbjct: 78 GGGGSGGGGGSSGNGGG-GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINA 136
Query: 190 SVGAAGAADGGDET 203
S G++ ++ +
Sbjct: 137 STGSSSSSSSSSSS 150
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+TGGG GG GG G GGGGGGG S + AA S + +A +
Sbjct: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
Query: 188 APSVGAAGAADGGDET 203
P + G++ +
Sbjct: 132 TPINASTGSSSSSSSS 147
Score = 48.9 bits (115), Expect = 3e-05
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRA-----GGAAAAAACGGGAA 62
G GGGGG S GGGG GGG S C P A GG + GGG A
Sbjct: 81 GSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVA 129
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 11/75 (14%)
Query: 125 SSFNTGGGAAGGPGDD-----------SGGGGGAGGGGGGGSSSSPAATSAAATSAAAAA 173
SS N GGG GG G + SGGGGG GGG +SS+P S ++S+++++
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 174 AAAAAAAAAAAGAGA 188
+++++++++++ + +
Sbjct: 148 SSSSSSSSSSSSSSS 162
Score = 43.1 bits (100), Expect = 0.002
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 130 GGGAAGGPGDDSGGGGGA------------GGGGGGGSSSSPAATSAAATSAAAAAAAAA 177
GGG++G G GGGGG+ GGGGGG S+ S+ +A+ +++++
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 178 AAAAAAAGAGAPSVGAAGA 196
+++++++ + + S ++ +
Sbjct: 145 SSSSSSSSSSSSSSSSSSS 163
Score = 42.0 bits (97), Expect = 0.004
Identities = 23/69 (33%), Positives = 29/69 (42%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
+ AA GGGGG G GGGGGSS + + AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 189 PSVGAAGAA 197
S G A+
Sbjct: 122 ISAGGGVAS 130
Score = 37.0 bits (84), Expect = 0.11
Identities = 20/70 (28%), Positives = 27/70 (38%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+ AA GGGGG GGGGG S + S AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 188 APSVGAAGAA 197
+ G ++
Sbjct: 122 ISAGGGVASS 131
Score = 36.6 bits (83), Expect = 0.15
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 19 GGGGG----GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGG GGG GGGGG+ + A GG +A GG A+
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
Score = 35.8 bits (81), Expect = 0.25
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 15/59 (25%)
Query: 19 GGGGGGGGS------------SGGGGG---AGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGGGGGS SGGGGG AGGG +S+ G ++++++ ++
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSS 152
Score = 33.9 bits (76), Expect = 0.97
Identities = 15/58 (25%), Positives = 37/58 (63%)
Query: 132 GAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
G+ GG G S GGG A S+ S +++S++++S+++++++++++++ G P
Sbjct: 114 GSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKP 171
Score = 30.8 bits (68), Expect = 8.2
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+T ++G S G +SS P ++AAAAAA + G G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 188 APSVGAAGAADGG 200
G + +GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 51.6 bits (122), Expect = 4e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGG +GG G SG GGG GGGGGGGS+ +P +A+ S +A A++
Sbjct: 78 GGGGSGGGGGSSGNGGG-GGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINA 136
Query: 190 SVGAAGAADGGDET 203
S G++ ++ +
Sbjct: 137 STGSSSSSSSSSSS 150
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+TGGG GG GG G GGGGGGG S + AA S + +A +
Sbjct: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
Query: 188 APSVGAAGAADGGDET 203
P + G++ +
Sbjct: 132 TPINASTGSSSSSSSS 147
Score = 48.9 bits (115), Expect = 3e-05
Identities = 27/56 (48%), Positives = 28/56 (50%), Gaps = 12/56 (21%)
Query: 19 GGGGGGGGSSG-------GGGGAGGGYSSACRPGPRA-----GGAAAAAACGGGAA 62
GGGGGGGGS G GGGG GGG S C P A GG + GGG A
Sbjct: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVA 129
Score = 46.6 bits (109), Expect = 1e-04
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 11/75 (14%)
Query: 125 SSFNTGGGAAGGPGDD-----------SGGGGGAGGGGGGGSSSSPAATSAAATSAAAAA 173
SS N GGG GG G + SGGGGG GGG +SS+P S ++S+++++
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 174 AAAAAAAAAAAGAGA 188
+++++++++++ + +
Sbjct: 148 SSSSSSSSSSSSSSS 162
Score = 43.1 bits (100), Expect = 0.002
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 130 GGGAAGGPGDDSGGGGGA------------GGGGGGGSSSSPAATSAAATSAAAAAAAAA 177
GGG++G G GGGGG+ GGGGGG S+ S+ +A+ +++++
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 178 AAAAAAAGAGAPSVGAAGA 196
+++++++ + + S ++ +
Sbjct: 145 SSSSSSSSSSSSSSSSSSS 163
Score = 42.0 bits (97), Expect = 0.004
Identities = 23/69 (33%), Positives = 29/69 (42%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
+ AA GGGGG G GGGGGSS + + AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 189 PSVGAAGAA 197
S G A+
Sbjct: 122 ISAGGGVAS 130
Score = 37.0 bits (84), Expect = 0.11
Identities = 20/70 (28%), Positives = 27/70 (38%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+ AA GGGGG GGGGG S + S AAA+ + G G
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Query: 188 APSVGAAGAA 197
+ G ++
Sbjct: 122 ISAGGGVASS 131
Score = 36.6 bits (83), Expect = 0.15
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 19 GGGGG----GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGG GGG GGGGG+ + A GG +A GG A+
Sbjct: 83 GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
Score = 35.8 bits (81), Expect = 0.25
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 15/59 (25%)
Query: 19 GGGGGGGGS------------SGGGGG---AGGGYSSACRPGPRAGGAAAAAACGGGAA 62
GGGGGGGGS SGGGGG AGGG +S+ G ++++++ ++
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSS 152
Score = 33.9 bits (76), Expect = 0.97
Identities = 15/58 (25%), Positives = 37/58 (63%)
Query: 132 GAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
G+ GG G S GGG A S+ S +++S++++S+++++++++++++ G P
Sbjct: 114 GSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKP 171
Score = 30.8 bits (68), Expect = 8.2
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 128 NTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG 187
+T ++G S G +SS P ++AAAAAA + G G
Sbjct: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
Query: 188 APSVGAAGAADGG 200
G + +GG
Sbjct: 81 GSGGGGGSSGNGG 93
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 51.6 bits (122), Expect = 4e-06
Identities = 54/208 (25%), Positives = 80/208 (38%), Gaps = 54/208 (25%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLL 78
GGGGGG G SGGGGG+GGG + P +G + ++CGG P ++S
Sbjct: 2293 GGGGGGSGGSGGGGGSGGGGA----PSGGSGHSGGPSSCGGA-------PSTSRS----- 2336
Query: 79 DIAARRVAEKWPFQRVEERFERIPEPVQRR--IVYWSFPRSEREICMYSSFNTGGGAAGG 136
R RIP+PV+ ++ S S+ E S +T G +
Sbjct: 2337 ------------------RPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLPP 2378
Query: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSA---------------AATSAAAAAAAAAAAAA 181
PG G A G+ + + A AA ++ ++ A A A
Sbjct: 2379 PGAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLESPRKGAANASGSSPDAPAKDAR 2438
Query: 182 AAAGA---GAPSVGAAGAADGGDETRLP 206
A+ G G P GAA + + +P
Sbjct: 2439 ASLGTLPLGKPRAGAASPLNSPLSSAVP 2466
Score = 43.5 bits (101), Expect = 0.001
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 41/133 (30%)
Query: 124 YSSFNTGGGAAGGPGDDSGGGGGAGGG---GGGGSSSSPAATSAAATSA----------- 169
Y ++GGG GG G GGGG GGG GG G S P++ A +++
Sbjct: 2286 YQRNHSGGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPV 2345
Query: 170 --------AAAAAAAAAA-----------------AAAAAGAGAPSVGAAGA-ADGGDET 203
++AA++ A A AA AG APS GA A+G +
Sbjct: 2346 RHHPPVLVSSAASSQAEADKMSGTSTPGPSLPPPGAAPEAGPSAPSRRPPGADAEGSERE 2405
Query: 204 RLPFRRGIALLES 216
P + + +LES
Sbjct: 2406 AEPIPK-MKVLES 2417
Score = 38.1 bits (87), Expect = 0.051
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 32 GGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAA 82
G +GG + A GP A +AA + CGGGA G ++ + L DIAA
Sbjct: 3 GSSGGAAAPAASSGPAAAASAAGSGCGGGAG-----EGAEEAAKDLADIAA 48
Score = 30.8 bits (68), Expect = 8.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 162 TSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGGDETRLPFRRGIALLESG 217
+ ++ +AA AA++ AAAA+AAG+G GA +G +E A SG
Sbjct: 2 SGSSGGAAAPAASSGPAAAASAAGSGC----GGGAGEGAEEAAKDLADIAAFFRSG 53
Score = 30.8 bits (68), Expect = 8.2
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 156 SSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAADGGDETRLPFRR 209
SS AA AA++ AAAA+AA + AG GA A AD R FR+
Sbjct: 4 SSGGAAAPAASSGPAAAASAAGSGCGGGAGEGAEE-AAKDLADIAAFFRSGFRK 56
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 51.6 bits (122), Expect = 4e-06
Identities = 36/88 (40%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 133 AAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAG----- 187
AAGG G + G G G G G S P+A +AA + AAAAAAAAAAAAA G
Sbjct: 2 AAGGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPPA 61
Query: 188 APSVGAAGAADGGDETRLPFRRGIALLE 215
P G A G + G A L+
Sbjct: 62 PPGPGTDAQAAGAERAEEAAGPGAAALQ 89
Score = 51.2 bits (121), Expect = 6e-06
Identities = 33/72 (45%), Positives = 37/72 (51%)
Query: 131 GGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPS 190
GG+ G G G G G GG G S++ AAT A +AAAAAAAAAAAAA AP
Sbjct: 4 GGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPP 63
Query: 191 VGAAGAADGGDE 202
A G E
Sbjct: 64 GPGTDAQAAGAE 75
Score = 47.0 bits (110), Expect = 1e-04
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 129 TGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGA 188
+GG A+ PG G G G G ++++PA +AAA +AAAAAAAAA A G
Sbjct: 6 SGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPPGP 65
Query: 189 PSVGAAGAADGGDETRLP 206
+ A A+ +E P
Sbjct: 66 GTDAQAAGAERAEEAAGP 83
Score = 39.3 bits (90), Expect = 0.023
Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 13 RLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPP 68
R C PG G G G GG G ++A P P AAAAAA AA G PP
Sbjct: 9 RASCPPGVGVG----PGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPP 60
Score = 33.1 bits (74), Expect = 1.7
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 22 GGGGGSSGGGGGAGGGYSSACRPGPRAGGAAA-----AAACGGGAALGLLPPGKT 71
GG GG + G G G + PGP A AA AAA AA PG T
Sbjct: 4 GGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPT 58
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 51.6 bits (122), Expect = 4e-06
Identities = 32/76 (42%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGGA GG G GGGG+GGGGGGGSS PA + AG P
Sbjct: 227 GGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSE-----------------AGLP 269
Query: 190 SVGAAGAADGGDETRL 205
G A D GDE L
Sbjct: 270 Q-GEARTRDDGDEEGL 284
Score = 46.6 bits (109), Expect = 1e-04
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
GGGGGGGGS GGG G GGG S+ P P+ + A G A
Sbjct: 231 GGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 273
Score = 43.1 bits (100), Expect = 0.002
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 2 AERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRP 44
AE+ P K+ GGGGGGG SGGGG GGG + RP
Sbjct: 213 AEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRP 255
Score = 33.9 bits (76), Expect = 0.97
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESL 77
P G G G GGGG GGG +GG + GGG++ P T S L
Sbjct: 219 PDGKKKGDGGGAGGGGGGGG----------SGGGGSGGGGGGGSSRPPAPQENTTSEAGL 268
Query: 78 LDIAAR 83
AR
Sbjct: 269 PQGEAR 274
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 51.6 bits (122), Expect = 4e-06
Identities = 32/76 (42%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAP 189
GGGA GG G GGGG+GGGGGGGSS PA + AG P
Sbjct: 211 GGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSE-----------------AGLP 253
Query: 190 SVGAAGAADGGDETRL 205
G A D GDE L
Sbjct: 254 Q-GEARTRDDGDEEGL 268
Score = 46.6 bits (109), Expect = 1e-04
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 19 GGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
GGGGGGGGS GGG G GGG S+ P P+ + A G A
Sbjct: 215 GGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 257
Score = 43.1 bits (100), Expect = 0.002
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 2 AERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRP 44
AE+ P K+ GGGGGGG SGGGG GGG + RP
Sbjct: 197 AEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRP 239
Score = 33.9 bits (76), Expect = 0.97
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESL 77
P G G G GGGG GGG +GG + GGG++ P T S L
Sbjct: 203 PDGKKKGDGGGAGGGGGGGG----------SGGGGSGGGGGGGSSRPPAPQENTTSEAGL 252
Query: 78 LDIAAR 83
AR
Sbjct: 253 PQGEAR 258
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 51.2 bits (121), Expect = 6e-06
Identities = 26/50 (52%), Positives = 30/50 (60%)
Query: 127 FNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAA 176
+ GGG G SGGG G GGGG GG + AA +AAA +AAAA AA
Sbjct: 75 YRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAA 124
Score = 51.2 bits (121), Expect = 6e-06
Identities = 62/215 (28%), Positives = 75/215 (34%), Gaps = 37/215 (17%)
Query: 17 RPGGGGG--GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAAL---GLLPPGKT 71
R GGGGG GGGSSGGG G GGG + P A AAAAAA A LLPP
Sbjct: 76 RGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPA-G 134
Query: 72 QSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGG 131
+ P+ L A P V R + + F+
Sbjct: 135 RRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGI------------LPQGFDQFY 182
Query: 132 GAAGGP-----------------GDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAA 174
AA GP G G G GGGGGS + A + AA +
Sbjct: 183 EAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSG 242
Query: 175 AAAAAAAAAAGAGAPSVGAAGAADGGDETRLPFRR 209
AGA S +A A + R P+ +
Sbjct: 243 GDGEGPPGEAGAEKSS--SAVAPQRSRKKRCPYTK 275
Score = 43.9 bits (102), Expect = 0.001
Identities = 30/61 (49%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 137 PGDDSGGGGGAGGG--GGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAA 194
P GGGG AGGG GGG A A AAAAAAAAAAAAA A + A
Sbjct: 74 PYRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPA 133
Query: 195 G 195
G
Sbjct: 134 G 134
Score = 38.1 bits (87), Expect = 0.051
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 5 GQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALG 64
G QPPP +P G G G GG GG + PG GAA + GG G
Sbjct: 192 GPQPPPPPAPP-QPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGS---GGDGEG 247
Query: 65 LLPPGKTQSPESLLDIAARRVAEK 88
PPG+ + +S +A +R +K
Sbjct: 248 --PPGEAGAEKSSSAVAPQRSRKK 269
>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
Length = 391
Score = 51.2 bits (121), Expect = 6e-06
Identities = 56/210 (26%), Positives = 80/210 (38%), Gaps = 43/210 (20%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESL 77
P G GGGGG GGGGG GG ++ R R A + G + ++P+
Sbjct: 25 PAGAGGGGGGGGGGGGGGGAKANQDRV-KRPMNAFMVWSRGQRRKMA------QENPKMH 77
Query: 78 LDIAARRVAEKWPFQRVEERFERIPEPVQRRIVY--------WSFPRSEREICMYSSFNT 129
++R+ +W E+ I E + R ++ + R + + ++
Sbjct: 78 NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSL 137
Query: 130 GGG--AAGGPGDDSGGGGGA---------------------GGGGGGGSSSSPAATSAAA 166
GG AAG +GGGG A GG GGG + + A
Sbjct: 138 AGGLLAAG-----AGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAY 192
Query: 167 TSAAAAAAAAAAAAAAAAGAGAPSVGAAGA 196
+ AAAAAAAA A A GA GA
Sbjct: 193 PGSVAAAAAAAAMMQEAQLAYGQHPGAGGA 222
Score = 39.7 bits (91), Expect = 0.018
Identities = 43/179 (24%), Positives = 63/179 (35%), Gaps = 24/179 (13%)
Query: 25 GGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA-ALGLLPPGKTQSPESLLDIAAR 83
GG++GGG G+++ PG A AAAAA A G P P +
Sbjct: 174 GGAAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHA------- 226
Query: 84 RVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGG-----AAGGPG 138
P P+P+ R + YS + G +G G
Sbjct: 227 --HPAHPHPHHPHAHPHNPQPMHRY---------DMGALQYSPISNSQGYMSASPSGYGG 275
Query: 139 DDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSVGAAGAA 197
G A GG +S A +AAA +A++ A A + + +G+P A A
Sbjct: 276 LPYGAAAAAAAAAGGAHQNSAVAAAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRA 334
Score = 38.1 bits (87), Expect = 0.051
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 123 MYSSFNTGGGAAG-----GPGDDSGGGGGAGGGGGGGSSSS 158
M + ++ GGA GP GGGGG GGGGGGG + +
Sbjct: 6 METDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGAKA 46
Score = 31.2 bits (69), Expect = 6.3
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 132 GAAGGPGDDSG--GGGGAGGGGGGGSSSSPA 160
G A P + SG G GG GGGGGGG A
Sbjct: 14 GGAQAPTNLSGPAGAGGGGGGGGGGGGGGGA 44
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 51.2 bits (121), Expect = 6e-06
Identities = 79/284 (27%), Positives = 92/284 (32%), Gaps = 88/284 (30%)
Query: 2 AERGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGA 61
AE PPP K L C G G G G ++ A G A GGGA
Sbjct: 270 AEMAPGPPPHKSLRCGEDEAAGPPGPPPPHPQRGLGLATG------ASGPAGPGGPGGGA 323
Query: 62 ALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREI 121
+ P S L Q++ P P + P+ + +
Sbjct: 324 GVRSYPVIPVPSKGFGL------------LQKLPPPL--FPHPYGFPTAFGLCPKKDDPV 369
Query: 122 CMYSSFNTGGGAAGGPGDDSGGGG-GAGGGGGG---------------------GSSSSP 159
G GGPG SGGGG G GGG GG G S
Sbjct: 370 L------GAGEPKGGPGTGSGGGGAGTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSG 423
Query: 160 AATSAAATSAAAAA------------------------------------AAAAAAAAAA 183
AA AAA +AAAAA AAAAAAAAAA
Sbjct: 424 AAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAAAAA 483
Query: 184 AGAGAPSV--GAAGAADG--GDETRLPFRRGIALLESGCVDNVL 223
AG+GAP GA A + G E R P L+ D L
Sbjct: 484 AGSGAPEPLDGAEPAKESGLGAEERCPSALSRGPLDEDGTDEAL 527
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 50.8 bits (120), Expect = 8e-06
Identities = 26/47 (55%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 130 GGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAA 176
GGG GG G SGG GG GGGGGGG S P SAA+ A A +A
Sbjct: 154 GGGGGGGGGGGSGGSGGGGGGGGGGDKSPPG--SAASKRARTAYTSA 198
Score = 44.7 bits (104), Expect = 5e-04
Identities = 23/42 (54%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 16 CRPGGGGGGGGSSG--GGGGAGGGYSSACRPGPRAGGAAAAA 55
C GGGGGGGG SG GGGG GGG PG A A A
Sbjct: 153 CGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTA 194
Score = 42.7 bits (99), Expect = 0.002
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 107 RRIVYWSFPRSEREICMYSSFNTGGGAAGGPGDDSGGGGGA---GGGGGGGSSSSPAATS 163
++I W + +S T G GG G GGG G GGGGGGG SP ++
Sbjct: 127 KQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSA 186
Query: 164 AAATSAAAAAAA 175
A+ + A +A
Sbjct: 187 ASKRARTAYTSA 198
Score = 38.5 bits (88), Expect = 0.039
Identities = 21/55 (38%), Positives = 24/55 (43%)
Query: 137 PGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGAGAPSV 191
PG G GGG GGGGGGGS S + +AA+ A A A V
Sbjct: 147 PGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLV 201
Score = 37.7 bits (86), Expect = 0.067
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 136 GPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAAAAAAAAAAAAAAGA 186
G + GGGGG GGGGG G S + +AA+ A A A
Sbjct: 148 GTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSA 198
Score = 34.7 bits (78), Expect = 0.57
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 18 PGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESL 77
PG G GG GGGGG G G G GG GGG PPG S +
Sbjct: 147 PGTAEGCGGGGGGGGGGGSG-------GSGGGG-------GGGGGGDKSPPGSAASKRAR 192
Query: 78 LDIAARRVAE 87
+ ++ E
Sbjct: 193 TAYTSAQLVE 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,064,592
Number of Sequences: 37866
Number of extensions: 2422127
Number of successful extensions: 66441
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 318
Number of HSP's that attempted gapping in prelim test: 25495
Number of HSP's gapped (non-prelim): 21093
length of query: 1215
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1101
effective length of database: 13,930,794
effective search space: 15337804194
effective search space used: 15337804194
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.