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Search of human proteins with 210147507
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|210147507 lipopolysaccharide-induced TNF-alpha factor
isoform 2 [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|210147507 lipopolysaccharide-induced TNF-alpha factor isoform... 324 2e-89
gi|210147505 lipopolysaccharide-induced TNF-alpha factor isoform... 273 5e-74
gi|65787265 lipopolysaccharide-induced TNF-alpha factor isoform ... 273 5e-74
gi|118344450 cell death inducing protein [Homo sapiens] 49 2e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.002
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 38 0.003
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 38 0.003
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 38 0.004
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 38 0.004
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 38 0.004
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 37 0.006
gi|55750053 atrophin-1 [Homo sapiens] 37 0.008
gi|55750041 atrophin-1 [Homo sapiens] 37 0.008
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 35 0.019
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 35 0.025
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.025
gi|41350201 epsin 1 isoform c [Homo sapiens] 35 0.025
gi|194248095 epsin 1 isoform b [Homo sapiens] 35 0.025
gi|194272148 epsin 1 isoform a [Homo sapiens] 35 0.025
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 35 0.025
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 35 0.025
gi|116284392 mucin 2 precursor [Homo sapiens] 35 0.032
gi|122939204 parkin co-regulated gene protein isoform 1 [Homo sa... 35 0.032
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 35 0.032
gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens] 35 0.032
gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens] 35 0.032
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 34 0.042
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 34 0.042
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 34 0.042
gi|56549694 enabled homolog isoform a [Homo sapiens] 34 0.042
>gi|210147507 lipopolysaccharide-induced TNF-alpha factor isoform 2
[Homo sapiens]
Length = 152
Score = 324 bits (831), Expect = 2e-89
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS
Sbjct: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
Query: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG
Sbjct: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
Query: 121 SLCLLGQECSGTIVALRSFDLLGSCNPPSSAS 152
SLCLLGQECSGTIVALRSFDLLGSCNPPSSAS
Sbjct: 121 SLCLLGQECSGTIVALRSFDLLGSCNPPSSAS 152
>gi|210147505 lipopolysaccharide-induced TNF-alpha factor isoform 1
[Homo sapiens]
Length = 161
Score = 273 bits (697), Expect = 5e-74
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS
Sbjct: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
Query: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG
Sbjct: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
Query: 121 SLCLLG 126
SLCLLG
Sbjct: 121 SLCLLG 126
>gi|65787265 lipopolysaccharide-induced TNF-alpha factor isoform 1
[Homo sapiens]
Length = 161
Score = 273 bits (697), Expect = 5e-74
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS
Sbjct: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
Query: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG
Sbjct: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 120
Query: 121 SLCLLG 126
SLCLLG
Sbjct: 121 SLCLLG 126
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 48.9 bits (115), Expect = 2e-06
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P PY+ P P P + A +Y P P PGP + G PP YT
Sbjct: 51 PPPYEPPGHPMPQPGFIPPHMS--ADGTYMPPGFYPPPGPHPPM-------GYYPPGPYT 101
Query: 64 Q-PAPIPNNNPITV-------QTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALT 115
P P P + TV TV V F P+Q CP C + I +++SY G +
Sbjct: 102 PGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMN 161
Query: 116 WLSCGSLCLLG 126
++ C +G
Sbjct: 162 FVLGFFCCFMG 172
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P P A T P++ P +P T PTPPA P G + P KG P+
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPPKGA-PTPPAATPPSLKGGLATPPHKGAPNPA 1290
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1291 VVTPPSP 1297
Score = 37.0 bits (84), Expect = 0.006
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P P A T P++ P +P T + + PTPPA P G P KG P T
Sbjct: 934 PSPKGAPTPPAATPPSPKGGPATPSPK-WAPTPPAATPPSPKGGPATPSPKGAPTPPAAT 992
Query: 64 QPAP 67
P+P
Sbjct: 993 PPSP 996
Score = 37.0 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P A T P++ P +P T + PTPPA P G P KG P
Sbjct: 955 ATPSPKWAPTPPAATPPSPKGGPATPSPKG-APTPPAATPPSPKGGPATPSPKGAPTPPA 1013
Query: 62 YTQPAP 67
T P+P
Sbjct: 1014 VTPPSP 1019
Score = 35.8 bits (81), Expect = 0.014
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P P A T P++ P +P T + TP A P P GL T P KG
Sbjct: 1186 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTP 1244
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1245 AATPPSP 1251
Score = 35.8 bits (81), Expect = 0.014
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 4 PGPYQAATGPSSAPSAP---PSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKG---MN 57
P P A T P+ P +P P+ T + PT P+ GPT T P KG M
Sbjct: 1327 PPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAAT-PSHKGGPAMT 1385
Query: 58 PPSYYTQPA-PIPNNNP 73
PPS PA P P +P
Sbjct: 1386 PPSPKRGPAIPSPKGDP 1402
Score = 35.0 bits (79), Expect = 0.025
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P P A T P++ P +P T + TP A P P GL T P KG
Sbjct: 1163 LATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTP 1221
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1222 AATPPSP 1228
Score = 34.3 bits (77), Expect = 0.042
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P P A T P++ P +P T TP A P P GL T P KG
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTP 1198
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1199 AATPPSP 1205
Score = 33.9 bits (76), Expect = 0.055
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 6 PYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMN-PPSYYTQ 64
P +A+ P ++ S S + +S PTPP+P PT VT KG+ PP
Sbjct: 830 PVEASFLPENSLSFQGSKDSPATTHS--PTPPSPKGAPTPSAVTPLSPKGVTLPPKETPT 887
Query: 65 PA----PIPNNNPIT 75
P+ P P P T
Sbjct: 888 PSVVNLPFPKEGPAT 902
Score = 33.9 bits (76), Expect = 0.055
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPA-PMPGPTTGLVTGPDGKGMNPPS 60
+ P P A T P++ P +P T + PTPPA P P P KG + P
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPATPSPKG-APTPPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1037 AATPPSP 1043
Score = 33.9 bits (76), Expect = 0.055
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYP-TPPAPMPGPTTGLVTGPDGKGMNPPS 60
+ P P A+T P++ P +P + P TP A +P P G T P KG P
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPAT-PSLKGAPTPP 1083
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1084 AATPPSP 1090
Score = 33.1 bits (74), Expect = 0.094
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P P A T P++ P +P T + TP A P P G T P PP+
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Score = 32.0 bits (71), Expect = 0.21
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P A T P++ +P T ++ PTPPA P G P KG P
Sbjct: 1049 ATPLPKGAPTTPAATLPSPKGGPATPSLKGA-PTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 62 YTQPAP 67
T P+P
Sbjct: 1108 ATPPSP 1113
Score = 31.2 bits (69), Expect = 0.36
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P A P++ P +P T TP A P P GL T P KG
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLAT-PPPKGAPTTPA 1153
Query: 62 YTQPAP 67
T P+P
Sbjct: 1154 ATPPSP 1159
Score = 31.2 bits (69), Expect = 0.36
Identities = 18/62 (29%), Positives = 23/62 (37%)
Query: 6 PYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQP 65
P++ A P+ P + PTPPA P G P KG P T P
Sbjct: 1282 PHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPP 1341
Query: 66 AP 67
+P
Sbjct: 1342 SP 1343
Score = 30.4 bits (67), Expect = 0.61
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 1 MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
++ P A T P++ P +P T TP A P P GL T P KG
Sbjct: 1117 LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-PPPKGAPTTP 1175
Query: 61 YYTQPAP 67
T P+P
Sbjct: 1176 AATPPSP 1182
Score = 30.4 bits (67), Expect = 0.61
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 1 MSVPGPYQ--AATGPSSAPSAPPSYEET---VAVNSYYPTPPAPMPGPTTGLVTGPDGKG 55
M+VP P + A P AP+ P S E + S Y P+P VT P K
Sbjct: 1553 MTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKE 1612
Query: 56 MNPPSYYTQPAP 67
P T P+P
Sbjct: 1613 APTPPAVTPPSP 1624
Score = 30.0 bits (66), Expect = 0.79
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 2 SVPGPYQAATGPSSAPS------APPSYEETVAVNSYYPTPPAPMPGPTTGLVTG-PDGK 54
+ P P A T P++ P A P ++ A N TPP+P GP T G P
Sbjct: 1256 ATPPPKGAPTPPAATPPSLKGGLATPPHKG--APNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 55 GMNPPSYYTQP-APIPNNNP 73
PPS P P P P
Sbjct: 1314 AATPPSPKGSPGTPPPKGAP 1333
Score = 27.7 bits (60), Expect = 3.9
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKG----MN 57
+ P P QA S S+ P P P+P PT T P KG +
Sbjct: 901 ATPAPKQAPA--LSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS 958
Query: 58 PPSYYTQPA---PIPNNNPIT 75
P T PA P P P T
Sbjct: 959 PKWAPTPPAATPPSPKGGPAT 979
Score = 26.9 bits (58), Expect = 6.7
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 4 PGPYQAATGPSSA--PSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPP 59
P Y+ A P P A S A TPP+P GP T P G +PP
Sbjct: 1587 PSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPAT---PAPKGTPTSPP 1641
Score = 26.6 bits (57), Expect = 8.8
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 6 PYQAATGPSSAPSAPPSYEETV----AVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
P A T P++ P +P T A TPP+P PT T G PS
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 62 YTQPAP 67
P P
Sbjct: 1366 KEGPTP 1371
Score = 26.6 bits (57), Expect = 8.8
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 15/70 (21%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMP-----GPTTGLVTG----PDGKG------MN 57
P AP+ P + E + TPPA P P T G P KG +
Sbjct: 1412 PKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT 1471
Query: 58 PPSYYTQPAP 67
PPS PAP
Sbjct: 1472 PPSPKEPPAP 1481
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 38.1 bits (87), Expect = 0.003
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 1 MSVPGPYQAATGPSSAPSAP-PSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPP 59
+S P P Q P S P P PS P P P P + + +GP +P
Sbjct: 433 LSSPSPGQQVQTPQSMPPPPQPS-----------PQPGQPSSQPNSNVSSGP---APSPS 478
Query: 60 SYYTQPAPIPNNNPITVQT 78
S+ P+P P+ +P+T +T
Sbjct: 479 SFLPSPSPQPSQSPVTART 497
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 38.1 bits (87), Expect = 0.003
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 1 MSVPGPYQAATGPSSAPSAP-PSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPP 59
+S P P Q P S P P PS P P P P + + +GP +P
Sbjct: 393 LSSPSPGQQVQTPQSMPPPPQPS-----------PQPGQPSSQPNSNVSSGP---APSPS 438
Query: 60 SYYTQPAPIPNNNPITVQT 78
S+ P+P P+ +P+T +T
Sbjct: 439 SFLPSPSPQPSQSPVTART 457
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P A PS+ APPS + PTPPA P P + P+ P T
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP-PETTAAPPTPSAT 244
Query: 64 QPAPIPNNNPITVQTVYVQHPITFLD 89
PAP+ ++ P V T LD
Sbjct: 245 TPAPLSSSAPPETTAVPPTPSATTLD 270
Score = 30.4 bits (67), Expect = 0.61
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 20/75 (26%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P P PSSA SAPP ET A PTP A P P + +P T
Sbjct: 262 PTPSATTLDPSSA-SAPP---ETTAAP---PTPSATTPAPPS-----------SPAPQET 303
Query: 64 QPAPI--PNNNPITV 76
API PN++P T+
Sbjct: 304 TAAPITTPNSSPTTL 318
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
PS+ APPS + PTP A P + P+ P T PAP ++
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP-PETTAAPPTPPATTPAPPSSSA 230
Query: 73 P 73
P
Sbjct: 231 P 231
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P A PS+ APPS + PTPPA P P + P+ P T
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP-PETTAAPPTPSAT 244
Query: 64 QPAPIPNNNPITVQTVYVQHPITFLD 89
PAP+ ++ P V T LD
Sbjct: 245 TPAPLSSSAPPETTAVPPTPSATTLD 270
Score = 30.4 bits (67), Expect = 0.61
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 20/75 (26%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P P PSSA SAPP ET A PTP A P P + +P T
Sbjct: 262 PTPSATTLDPSSA-SAPP---ETTAAP---PTPSATTPAPPS-----------SPAPQET 303
Query: 64 QPAPI--PNNNPITV 76
API PN++P T+
Sbjct: 304 TAAPITTPNSSPTTL 318
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
PS+ APPS + PTP A P + P+ P T PAP ++
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP-PETTAAPPTPPATTPAPPSSSA 230
Query: 73 P 73
P
Sbjct: 231 P 231
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P A PS+ APPS + PTPPA P P + P+ P T
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAP-PETTAAPPTPSAT 244
Query: 64 QPAPIPNNNPITVQTVYVQHPITFLD 89
PAP+ ++ P V T LD
Sbjct: 245 TPAPLSSSAPPETTAVPPTPSATTLD 270
Score = 30.4 bits (67), Expect = 0.61
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 20/75 (26%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P P PSSA SAPP ET A PTP A P P + +P T
Sbjct: 262 PTPSATTLDPSSA-SAPP---ETTAAP---PTPSATTPAPPS-----------SPAPQET 303
Query: 64 QPAPI--PNNNPITV 76
API PN++P T+
Sbjct: 304 TAAPITTPNSSPTTL 318
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
PS+ APPS + PTP A P + P+ P T PAP ++
Sbjct: 172 PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAP-PETTAAPPTPPATTPAPPSSSA 230
Query: 73 P 73
P
Sbjct: 231 P 231
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 37.0 bits (84), Expect = 0.006
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 1 MSVPGPYQAAT-GPSSAPSAPPSYEETVAVNSYYPTP-PAPMPGPTTGLVTGPDGKGMNP 58
+ +PGP++ GP S P+ P ++ + P P P+PGP G + GP +
Sbjct: 143 VQIPGPFRGPIPGPISGPAPIPG-----PISGPFSGPNPGPIPGPNPGPIPGPISGPIPG 197
Query: 59 PSYYTQPAPIP 69
P P PIP
Sbjct: 198 PISVPIPGPIP 208
Score = 34.3 bits (77), Expect = 0.042
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 27/84 (32%)
Query: 2 SVPGPYQAATGPSSAPSAPPS-----YEETVAVNSYYPTP-------PAPMPGPTTGLVT 49
S+PGP GP+ PS P+ V + + P PAP+PGP +G +
Sbjct: 116 SIPGPIP---GPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFS 172
Query: 50 GPDGKGMNPPSYYTQPAPIPNNNP 73
GP+ P PIP NP
Sbjct: 173 GPN------------PGPIPGPNP 184
Score = 33.1 bits (74), Expect = 0.094
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 3 VPGPYQAATGPSSAPSAPPSYEETVA-VNSYYPTP-PAPMPGPTTGLVTGPDGKGMNPPS 60
+PGP +GP S P+ P ++ P P P P+ GP GL+ GP ++ P
Sbjct: 207 IPGPI---SGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPG 263
Query: 61 YYTQPAPIPNNNP 73
P P P P
Sbjct: 264 PIIGPIPSPAQIP 276
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 3 VPGPYQAA-TGPSSAPSAPPSYEETVA-VNSYYPTP-----PAPMPGPTTGLVTGPDGKG 55
+PGP +GP+ P P+ ++ P P P P+PGP +G ++GP+
Sbjct: 163 IPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGP 222
Query: 56 MNPPSYYTQPAPIPNNNP 73
+ P P PI NP
Sbjct: 223 IPGPI----PGPISGPNP 236
Score = 30.4 bits (67), Expect = 0.61
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 34 PTP-PAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNNPITV 76
P P PA +PGP G + GP PS P P P + P+ +
Sbjct: 102 PIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQI 145
Score = 27.3 bits (59), Expect = 5.1
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 4 PGPYQAAT-GPSSAPSAPPSYEETVAVNSYYPTP-PAPMPGPTTGLVTGPDGKGMNPPSY 61
PGP A GP+ P P + P P PA +P P + GP + P
Sbjct: 96 PGPIPAPIPGPAQIPGPLPG-------SIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGP 148
Query: 62 YTQPAPIPNNNPITV 76
+ P P P + P +
Sbjct: 149 FRGPIPGPISGPAPI 163
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.6 bits (83), Expect = 0.008
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 14/97 (14%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPA---------PMPGPTTGLVTGPDGK 54
PG Y+ AT P P +PPS+ +PPA P GP GP G
Sbjct: 646 PGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGL 705
Query: 55 GMNPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDRP 91
PP P P + P T Q P + P
Sbjct: 706 PSLPP-----PPAAPASGPPLSATQIKQEPAEEYETP 737
Score = 26.6 bits (57), Expect = 8.8
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 9 AATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMN-----PPSYYT 63
+++G S AP P N PPA P T L P + +N PP
Sbjct: 263 SSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGA 322
Query: 64 QPAP 67
QP P
Sbjct: 323 QPLP 326
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.6 bits (83), Expect = 0.008
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 14/97 (14%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPA---------PMPGPTTGLVTGPDGK 54
PG Y+ AT P P +PPS+ +PPA P GP GP G
Sbjct: 646 PGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGL 705
Query: 55 GMNPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDRP 91
PP P P + P T Q P + P
Sbjct: 706 PSLPP-----PPAAPASGPPLSATQIKQEPAEEYETP 737
Score = 26.6 bits (57), Expect = 8.8
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 9 AATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMN-----PPSYYT 63
+++G S AP P N PPA P T L P + +N PP
Sbjct: 263 SSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGA 322
Query: 64 QPAP 67
QP P
Sbjct: 323 QPLP 326
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 35.4 bits (80), Expect = 0.019
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 4 PGPYQAATGPSSAPSAP-PSYEETVAVNSYYPTPPAPMP-GPTTGLVTGPDGKGMNP-PS 60
P P ++ T +SAP P P E + P P+ P P GL T P G G P P
Sbjct: 144 PHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPRPF 203
Query: 61 YYTQPAPIPNNNPITVQTVYVQHPITFLDRP 91
QPA + N P P T P
Sbjct: 204 LPGQPAEVDGNPPPAAPEAPAASPSTASPAP 234
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 35.0 bits (79), Expect = 0.025
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 128 ECSGTIVALRSFDLLGSCNPPSSAS 152
ECSGT++A S LL S NPP+SAS
Sbjct: 445 ECSGTVIAHCSLKLLDSSNPPTSAS 469
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.0 bits (79), Expect = 0.025
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 13 PSSAPSAP---PSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIP 69
PS AP+ P + + V ++ PPAP P P L P G + PPS +P P P
Sbjct: 1971 PSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPP-LSLLPVGPALQPPSLAVRPPPAP 2029
Score = 33.9 bits (76), Expect = 0.055
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAP 67
P++ P+AP + AV P PPAP P T P+ PP+ T P P
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQST-PTP 561
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 35.0 bits (79), Expect = 0.025
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 10 ATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIP 69
ATGPS P+ T+ +N +P P+PG ++ P G G P P P
Sbjct: 485 ATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYIS-PLGGGPGLPPMMPPGPPAP 543
Query: 70 NNNP 73
N NP
Sbjct: 544 NTNP 547
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 35.0 bits (79), Expect = 0.025
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 10 ATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIP 69
ATGPS P+ T+ +N +P P+PG ++ P G G P P P
Sbjct: 511 ATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYIS-PLGGGPGLPPMMPPGPPAP 569
Query: 70 NNNP 73
N NP
Sbjct: 570 NTNP 573
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 35.0 bits (79), Expect = 0.025
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 10 ATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIP 69
ATGPS P+ T+ +N +P P+PG ++ P G G P P P
Sbjct: 597 ATGPSVTNPFQPAPPATLTLNQLRLSPVPPVPGAPPTYIS-PLGGGPGLPPMMPPGPPAP 655
Query: 70 NNNP 73
N NP
Sbjct: 656 NTNP 659
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 35.0 bits (79), Expect = 0.025
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
SVP P +GP SA P AV P PA +P P+ V+ N P+
Sbjct: 480 SVPPPQMGGSGPLSAVPGGPH-----AVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAP 534
Query: 62 YTQPAPIPNNNPITVQTVYVQH 83
Q + ++ P++ + +QH
Sbjct: 535 LAQSQQLSSHTPVSRSSSIIQH 556
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 35.0 bits (79), Expect = 0.025
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPG---PTTGLVTGPDGKGMNPPS 60
PGPY A P + +APP TV ++ P P P P PT GL P PS
Sbjct: 171 PGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNP-FQVPS 229
Query: 61 YYTQPAPIP 69
+ P+P
Sbjct: 230 GPSGAPPMP 238
Score = 31.2 bits (69), Expect = 0.36
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 14/81 (17%)
Query: 3 VPGPYQAATGPSSAPSAPP-----SYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGK--- 54
+P PY A T P++A P S + YPTP P P P P
Sbjct: 126 LPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGA 185
Query: 55 ------GMNPPSYYTQPAPIP 69
G PP + PAP P
Sbjct: 186 APPVPWGTVPPGAWGPPAPYP 206
Score = 28.9 bits (63), Expect = 1.8
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 6 PYQAATGPSSAPSA-PPSYEETV-----AVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPP 59
P+ + PSS PS PPS + A YP+ P P P P G PP
Sbjct: 39 PWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPP 98
Query: 60 SYYTQPAP-IPNNNP 73
PAP +P P
Sbjct: 99 G-GPYPAPTVPGPGP 112
Score = 28.9 bits (63), Expect = 1.8
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
SVP + PS+ P P +V P P P P P +G P G P+
Sbjct: 48 SVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTV 107
Query: 62 ----YTQPAPIPN 70
T P P PN
Sbjct: 108 PGPGPTGPYPTPN 120
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 34.7 bits (78), Expect = 0.032
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPP--APMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPN 70
P++ PS PP+ T + P+PP P+ PT+ P PP+ T P P
Sbjct: 1598 PTTTPS-PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1656
Query: 71 NNPITVQTVYVQHPITFLDRPIQMCCPS 98
+P T T PIT P PS
Sbjct: 1657 PSPPTTTT--PSPPITTTTTPPPTTTPS 1682
Score = 34.7 bits (78), Expect = 0.032
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 14/104 (13%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P + P++ P PP+ T+ P P P PTT T P +PP+
Sbjct: 1610 TTPPPTTTPSPPTTTPITPPTSTTTL------PPTTTPSPPPTT-TTTPPPTTTPSPPTT 1662
Query: 62 YTQPAPI-------PNNNPITVQTVYVQHPITFLDRPIQMCCPS 98
T PI P P + T P T + P PS
Sbjct: 1663 TTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 1706
Score = 34.3 bits (77), Expect = 0.042
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 17/90 (18%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P + P++ P PP+ T+ PP P P T T P PP+
Sbjct: 1492 TTPPPTTTPSPPTTTPITPPASTTTL--------PPTTTPSPPTTTTTTP------PPT- 1536
Query: 62 YTQPAPIPNNNPITVQTVYVQHPITFLDRP 91
T P+P P PIT T P T P
Sbjct: 1537 -TTPSP-PTTTPITPPTSTTTLPPTTTPSP 1564
Score = 33.5 bits (75), Expect = 0.072
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 11 TGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPN 70
T P + +PP T + P+PP P P T + P PP T P+P P
Sbjct: 1447 TPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPP-TTTPSP-PT 1504
Query: 71 NNPIT 75
PIT
Sbjct: 1505 TTPIT 1509
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 11 TGPSSAPSAPPSYEETVAVNSYYPTPPAPMPG-PTTGLVTGPDGKGMNPPSYYTQPAPIP 69
T P+S + PP+ + + PP P PTT +T P PP+ T P+P P
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT--TTPSPPP 1566
Query: 70 NNNPITVQTVYVQHPITFLDRP 91
T P T P
Sbjct: 1567 TTTTTPPPTTTPSPPTTTTPSP 1588
Score = 32.0 bits (71), Expect = 0.21
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 16/90 (17%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P + P++ +PP+ T PP P P T T P PP+
Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTP-------PPTTTPSPPTTTTTTP------PPT- 1615
Query: 62 YTQPAPIPNNNPITVQTVYVQHPITFLDRP 91
T P+P P PIT T P T P
Sbjct: 1616 -TTPSP-PTTTPITPPTSTTTLPPTTTPSP 1643
Score = 31.2 bits (69), Expect = 0.36
Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P + P++ PS P + + P P PTT +T P PP+
Sbjct: 1462 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 1521
Query: 62 YTQP------APIPNNNPITVQTVYVQHPITFLDRP 91
P P P P T + P + P
Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1557
Score = 30.8 bits (68), Expect = 0.46
Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 8/61 (13%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P++ PS PP+ T+ PP P P T T P P T P P
Sbjct: 1402 PTTTPSPPPTSTTTL--------PPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTT 1453
Query: 73 P 73
P
Sbjct: 1454 P 1454
Score = 30.8 bits (68), Expect = 0.46
Identities = 20/79 (25%), Positives = 26/79 (32%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P++ PS PP+ T + P P P T T P P T P P
Sbjct: 1558 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTT 1617
Query: 73 PITVQTVYVQHPITFLDRP 91
P T + P + P
Sbjct: 1618 PSPPTTTPITPPTSTTTLP 1636
Score = 30.8 bits (68), Expect = 0.46
Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 16/115 (13%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPP-----------APMPGPTTGLVTG 50
+ P P + P + +PP+ T + P+ P P P PTT
Sbjct: 1673 TTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 1732
Query: 51 PDGKGMNPPSYYTQPAPIPNNNPITVQTVYVQ-HPITF----LDRPIQMCCPSCN 100
P P + T P ++P+T + P TF P C P CN
Sbjct: 1733 PTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTPCVPLCN 1787
Score = 30.4 bits (67), Expect = 0.61
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
+ P P + P++ P PP+ T+ P P P PTT T P +PP+
Sbjct: 1531 TTPPPTTTPSPPTTTPITPPTSTTTL------PPTTTPSPPPTT-TTTPPPTTTPSPPT- 1582
Query: 62 YTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPS 98
T P+P T P T P PS
Sbjct: 1583 TTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPS 1619
Score = 29.6 bits (65), Expect = 1.0
Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P++ PS PP+ T P P PTT + P PP T +PI
Sbjct: 1637 PTTTPSPPPTTTTT-------PPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP 1689
Query: 73 PITVQTVYVQHPITFLDRPI 92
T+ P T PI
Sbjct: 1690 SPPTTTMTTPSPTTTPSSPI 1709
Score = 29.3 bits (64), Expect = 1.4
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P +T P S P+AP + ++ T +P PT G TG P + T
Sbjct: 4243 PAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTG-SSSAPTPSTVQT 4301
Query: 64 ------QPAPIPNNNPITVQTVYVQ-HPITFLDRPIQMCC 96
P P P + P ++T ++ +P + L +CC
Sbjct: 4302 TTTSAWTPTPTPLSTPSIIRTTGLRPYPSSVL-----ICC 4336
Score = 28.1 bits (61), Expect = 3.0
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 2 SVPGPYQAATGP-SSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 60
+ P P + P ++ + PP+ + +++ PP P P T + P P +
Sbjct: 1430 TTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTT 1489
Query: 61 YYTQPAPIPNNNPITVQTV 79
T P P +P T +
Sbjct: 1490 TTTTPPPTTTPSPPTTTPI 1508
Score = 27.7 bits (60), Expect = 3.9
Identities = 15/61 (24%), Positives = 20/61 (32%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P+S + PP+ + + PP P P T P P T P P
Sbjct: 1410 PTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTT 1469
Query: 73 P 73
P
Sbjct: 1470 P 1470
Score = 27.3 bits (59), Expect = 5.1
Identities = 19/86 (22%), Positives = 27/86 (31%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P++ PS P + + + + PP P P M PS T P+
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT 1712
Query: 73 PITVQTVYVQHPITFLDRPIQMCCPS 98
T P T + P PS
Sbjct: 1713 TTPSSTTTPSPPPTTMTTPSPTTTPS 1738
Score = 26.6 bits (57), Expect = 8.8
Identities = 20/84 (23%), Positives = 26/84 (30%), Gaps = 9/84 (10%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPP---------APMPGPTTGLVTGPDGK 54
P P T P + +PP+ T + P+PP P P T P
Sbjct: 1408 PPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPT 1467
Query: 55 GMNPPSYYTQPAPIPNNNPITVQT 78
P T P +P T T
Sbjct: 1468 TTPSPPTTTPSPPTTTPSPPTTTT 1491
>gi|122939204 parkin co-regulated gene protein isoform 1 [Homo
sapiens]
Length = 296
Score = 34.7 bits (78), Expect = 0.032
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 120 GSLCLLGQECSGTIVALRSFDLLGSCNPPSSAS 152
GS L ECSG I+A + D LGS +PP+SAS
Sbjct: 205 GSYSLPRLECSGAIMARCNLDHLGSSDPPTSAS 237
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 34.7 bits (78), Expect = 0.032
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 11/72 (15%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGP--DGKGMNPPSY 61
P P+ P + P APP E P P+P P L GP + +
Sbjct: 27 PPPWPPPPPPPAPPPAPPLLSEA---------SPEPIPEPCPELAPGPCPEATSESATEL 77
Query: 62 YTQPAPIPNNNP 73
YT+P P P P
Sbjct: 78 YTEPTPEPATEP 89
Score = 30.4 bits (67), Expect = 0.61
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 6 PYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQP 65
P Q P+ +P PP + P PP P P P L++ + + P P
Sbjct: 13 PPQDGEQPAESPEPPPPWP---------PPPPPPAPPPAPPLLSEASPEPIPEPCPELAP 63
Query: 66 APIPNNNPITVQTVYVQ 82
P P + +Y +
Sbjct: 64 GPCPEATSESATELYTE 80
Score = 28.9 bits (63), Expect = 1.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSY 61
S P P + AT P+ P+ P+ E T AP P P L + P+ P
Sbjct: 91 SEPAP-EPATEPAPEPATEPAPEPAPEP----ATESAPEPTPEPALESVPEPAPELTPEV 145
Query: 62 YTQPAPIPNNNPIT 75
+ AP P P+T
Sbjct: 146 APELAPEPTPEPVT 159
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 13 PSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAPIPNNN 72
P AP P A Y T P P P P+ P T+PAP P
Sbjct: 59 PELAPGPCPEATSESATELY--TEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPE 116
Query: 73 PIT 75
P T
Sbjct: 117 PAT 119
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 8 QAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYTQPAP 67
+ AT P+S P+ P+ E T PAP P P + P+ P+ + P P
Sbjct: 84 EPATEPASEPAPEPATEPAPEP----ATEPAPEPAPEPATESAPE--PTPEPALESVPEP 137
Query: 68 IPNNNP 73
P P
Sbjct: 138 APELTP 143
>gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens]
Length = 1111
Score = 34.7 bits (78), Expect = 0.032
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 14 SSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPD-GKGMNPPSYYTQPAPIPNNN 72
S SAP S T+ + S +P P PTT TGP G N P + P+P P+ N
Sbjct: 826 SLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFN-PGHVLSPSPSPSTN 884
>gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens]
Length = 1151
Score = 34.7 bits (78), Expect = 0.032
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 14 SSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPD-GKGMNPPSYYTQPAPIPNNN 72
S SAP S T+ + S +P P PTT TGP G N P + P+P P+ N
Sbjct: 861 SLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSLGPSFN-PGHVLSPSPSPSTN 919
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.042
Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 2 SVPGPYQAAT-----------GPSSAPSAPPSYEETVAVNSYYPTP-PAPMPGPTTGLVT 49
SVP P A+T P+ AP A P VAV P P PAP P P V
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAP-VAAPVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 50 GPDGKGMNPPSYYTQPAPIPNNNP 73
P P+ PAP P+ P
Sbjct: 186 APAPAPAPAPAPAPAPAPAPDAAP 209
Score = 31.6 bits (70), Expect = 0.27
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 8 QAATGPSSAPSAPPSYEETVAVNSYYPTP-----PAPMPGPTTGLVTGPDGKGMNPPSYY 62
++ G AP PS ++ P P PAP P P V P + P+
Sbjct: 113 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 172
Query: 63 TQPAPIPNNNPI 74
PAP P P+
Sbjct: 173 PAPAPAPAPAPV 184
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 34.3 bits (77), Expect = 0.042
Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 2 SVPGPYQAAT-----------GPSSAPSAPPSYEETVAVNSYYPTP-PAPMPGPTTGLVT 49
SVP P A+T P+ AP A P VAV P P PAP P P V
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAP-VAAPVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 50 GPDGKGMNPPSYYTQPAPIPNNNP 73
P P+ PAP P+ P
Sbjct: 186 APAPAPAPAPAPAPAPAPAPDAAP 209
Score = 31.6 bits (70), Expect = 0.27
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 8 QAATGPSSAPSAPPSYEETVAVNSYYPTP-----PAPMPGPTTGLVTGPDGKGMNPPSYY 62
++ G AP PS ++ P P PAP P P V P + P+
Sbjct: 113 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 172
Query: 63 TQPAPIPNNNPI 74
PAP P P+
Sbjct: 173 PAPAPAPAPAPV 184
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 34.3 bits (77), Expect = 0.042
Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 2 SVPGPYQAAT-----------GPSSAPSAPPSYEETVAVNSYYPTP-PAPMPGPTTGLVT 49
SVP P A+T P+ AP A P VAV P P PAP P P V
Sbjct: 138 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAP-VAAPVAVAVLAPAPAPAPAPAPAPAPVA 196
Query: 50 GPDGKGMNPPSYYTQPAPIPNNNP 73
P P+ PAP P+ P
Sbjct: 197 APAPAPAPAPAPAPAPAPAPDAAP 220
Score = 31.6 bits (70), Expect = 0.27
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 8 QAATGPSSAPSAPPSYEETVAVNSYYPTP-----PAPMPGPTTGLVTGPDGKGMNPPSYY 62
++ G AP PS ++ P P PAP P P V P + P+
Sbjct: 124 ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPA 183
Query: 63 TQPAPIPNNNPI 74
PAP P P+
Sbjct: 184 PAPAPAPAPAPV 195
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 34.3 bits (77), Expect = 0.042
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 2 SVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMP-GPTTGLVTGPDGKGMNPPS 60
S PG QAA+ P+ PS ++ + + P PP P+P GP V P G PP
Sbjct: 287 SEPG-LQAASQPAETPS-----QQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPP 340
Query: 61 YY--TQPAPIPNNNPITVQ 77
T P P P P+ Q
Sbjct: 341 PLPSTGPPPPPPPPPLPNQ 359
Score = 30.4 bits (67), Expect = 0.61
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 9/70 (12%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
P GP + P PP + P PP P P P TGP PP
Sbjct: 301 PSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLP-STGPP-----PP---P 351
Query: 64 QPAPIPNNNP 73
P P+PN P
Sbjct: 352 PPPPLPNQVP 361
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Query: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGP 43
P P +TGP P PP + + P PP P P P
Sbjct: 338 PPPPLPSTGPPPPPPPPP-------LPNQVPPPPPPPPAP 370
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,439,492
Number of Sequences: 37866
Number of extensions: 518421
Number of successful extensions: 4464
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 3181
Number of HSP's gapped (non-prelim): 1439
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.