Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 209977084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
(449 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 920 0.0
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 899 0.0
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 779 0.0
gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 740 0.0
gi|7661892 REST corepressor 1 [Homo sapiens] 504 e-143
gi|27734799 REST corepressor 2 [Homo sapiens] 468 e-132
gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens] 124 2e-28
gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens] 124 2e-28
gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo sapi... 124 2e-28
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 100 2e-21
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 100 2e-21
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 93 4e-19
gi|14141170 metastasis-associated protein 2 [Homo sapiens] 65 2e-10
gi|94721313 mesoderm induction early response 1, family member 3... 65 2e-10
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 64 2e-10
gi|210031154 zinc finger protein 541 [Homo sapiens] 64 2e-10
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 63 6e-10
gi|45267839 mesoderm induction early response 1, family member 2... 62 1e-09
gi|115527080 metastasis associated protein [Homo sapiens] 57 3e-08
gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 52 1e-06
gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 52 1e-06
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 51 2e-06
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 51 2e-06
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 51 2e-06
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 51 2e-06
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 51 2e-06
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 51 2e-06
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 51 2e-06
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 51 2e-06
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 51 2e-06
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 920 bits (2377), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR
Sbjct: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
Query: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL 120
VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL
Sbjct: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL 120
Query: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS
Sbjct: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
Query: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE
Sbjct: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
Query: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL
Sbjct: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
Query: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV 360
RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV
Sbjct: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV 360
Query: 361 RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE 420
RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE
Sbjct: 361 RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE 420
Query: 421 ETKSASNVPSGKSTDEEEEVCLCMEFELI 449
ETKSASNVPSGKSTDEEEEVCLCMEFELI
Sbjct: 421 ETKSASNVPSGKSTDEEEEVCLCMEFELI 449
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 899 bits (2322), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR
Sbjct: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
Query: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL 120
VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL
Sbjct: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL 120
Query: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS
Sbjct: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
Query: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE
Sbjct: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
Query: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL
Sbjct: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
Query: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV 360
RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV
Sbjct: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV 360
Query: 361 RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE 420
RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE
Sbjct: 361 RKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGE 420
Query: 421 ETKSASNVPSGKSTDEEEE 439
ETKSASNVPSGKSTDEEEE
Sbjct: 421 ETKSASNVPSGKSTDEEEE 439
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 779 bits (2011), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 59 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQ 118
MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQ
Sbjct: 1 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQ 60
Query: 119 ALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTI 178
ALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTI
Sbjct: 61 ALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTI 120
Query: 179 ASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAK 238
ASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAK
Sbjct: 121 ASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAK 180
Query: 239 KEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANT 298
KEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANT
Sbjct: 181 KEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANT 240
Query: 299 ILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQ 358
ILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQ
Sbjct: 241 ILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQ 300
Query: 359 GVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTL 418
GVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTL
Sbjct: 301 GVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTL 360
Query: 419 GEETKSASNVPSGKSTDEEEE 439
GEETKSASNVPSGKSTDEEEE
Sbjct: 361 GEETKSASNVPSGKSTDEEEE 381
>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
Length = 436
Score = 740 bits (1911), Expect = 0.0
Identities = 359/364 (98%), Positives = 360/364 (98%)
Query: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR
Sbjct: 1 MPGMMEKGPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVGMR 60
Query: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQAL 120
VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDA+LDEYIAIAKEKHGYNVEQAL
Sbjct: 61 VGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDARLDEYIAIAKEKHGYNVEQAL 120
Query: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS
Sbjct: 121 GMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIAS 180
Query: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE
Sbjct: 181 LVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKE 240
Query: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL
Sbjct: 241 GNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTIL 300
Query: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGV 360
RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQG
Sbjct: 301 RQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGT 360
Query: 361 RKYG 364
G
Sbjct: 361 DPTG 364
Score = 37.0 bits (84), Expect = 0.036
Identities = 16/75 (21%), Positives = 38/75 (50%)
Query: 348 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 407
WT E+++L Q +GK F I ++ +KT+ + ++ ++++ + ++ +
Sbjct: 147 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLA 206
Query: 408 TQASNGDASTLGEET 422
+ + GD+ EET
Sbjct: 207 NRHNQGDSDDDVEET 221
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 504 bits (1298), Expect = e-143
Identities = 265/424 (62%), Positives = 326/424 (76%), Gaps = 20/424 (4%)
Query: 19 NGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDVG-MRVGAEYQARIPEFDPG-- 75
NG KS A +G SS+N + E SG SSD+EH G MRVG +YQA +P+FDP
Sbjct: 64 NGQNKSLAAAAPNGNSSSNS---WEEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKL 120
Query: 76 ATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLA 135
A + ++DN GMLVWSP ++ +AKLDEYIAIAKEKHGYN+EQALGMLFWHKHNIEKSLA
Sbjct: 121 ARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLA 180
Query: 136 DLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRT 195
DLPNFTPFPDEWTVEDKVLFEQAFSFHGK+FHRIQQMLPDK+IASLVK+YYSWKKTR++T
Sbjct: 181 DLPNFTPFPDEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKT 240
Query: 196 SLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLG 255
S+MDR ARK + + +S+D++EE + + D + D KE+KKE + V K
Sbjct: 241 SVMDRHARK--QKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVPQVK---- 294
Query: 256 RREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQ 315
+E S Q ++ R+K +PPKGM+L+QEDV AVS + AA T+LRQLDMEL+S+KRQ+Q
Sbjct: 295 -KEKHSTQAKN---RAKRKPPKGMFLSQEDVEAVSANATAATTVLRQLDMELVSVKRQIQ 350
Query: 316 NAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIG 375
N KQ NSALK+K++GGIE ++ PE QK NARWTTEEQLLAVQ +RKYG+DFQAI+DVIG
Sbjct: 351 NIKQTNSALKEKLDGGIEPYRLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIG 410
Query: 376 NKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTD 435
NK+V QVKNFFVNYRRRFN++EVLQEWEAE G + +NG ++ + KS N S K +
Sbjct: 411 NKSVVQVKNFFVNYRRRFNIDEVLQEWEAEHGKEETNGPSNQ--KPVKSPDN--SIKMPE 466
Query: 436 EEEE 439
EE+E
Sbjct: 467 EEDE 470
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 468 bits (1203), Expect = e-132
Identities = 253/445 (56%), Positives = 319/445 (71%), Gaps = 30/445 (6%)
Query: 1 MPGMMEK---GPELLGKNRSANGSAKSPAGGGGSGASSTNGGLHYSEPESGCSSDDEHDV 57
MP +MEK G +L ++R+ + NGG +SE +S + HD
Sbjct: 1 MPSVMEKPSAGSGILSRSRAK---------------TVPNGGQPHSEDDSS-EEEHSHDS 44
Query: 58 GMRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNV 116
+RVG YQA IPE P + +Y++K+ GMLVWSP H + DAKLD+YIA+AKEKHGYN+
Sbjct: 45 MIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKEKHGYNI 104
Query: 117 EQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDK 176
EQALGML WHKH++EKSLADL NFTPFPDEWTVEDKVLFEQAF FHGK F RIQQMLPDK
Sbjct: 105 EQALGMLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFGFHGKCFQRIQQMLPDK 164
Query: 177 TIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDYDP-KK 235
I SLVKYYYSWKKTRSRTS+MDRQAR+L R ++ DS D++EE G S+ +P
Sbjct: 165 LIPSLVKYYYSWKKTRSRTSVMDRQARRLGGRKDKEDS-DELEEGR---GGVSEGEPDPA 220
Query: 236 EAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNA 295
+ K+E +P+ ++ G G++E Q Q+RHH R++ RPPKGMYL+ E + AVS SP+
Sbjct: 221 DPKREPLPSRPL-NARPGPGKKEVQVSQYRHHPLRTRRRPPKGMYLSPEGLTAVSGSPDL 279
Query: 296 ANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLL 355
AN LR LD +LISLKRQVQ+ KQ NS+L+Q +EGGI+ +PPE+N K N+RWTT+EQLL
Sbjct: 280 ANLTLRGLDSQLISLKRQVQSMKQTNSSLRQALEGGIDPLRPPEANTKFNSRWTTDEQLL 339
Query: 356 AVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDA 415
AVQ +R+YGKDF AIA+VIGNKT+ QVK FFV+YRRRFNLEEVLQEWEAEQ A
Sbjct: 340 AVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDGAPG---A 396
Query: 416 STLGEETKSASNVPSGKSTDEEEEV 440
EE + + +P+ + +E++EV
Sbjct: 397 PVPMEEARRGAPLPA-PALEEDDEV 420
>gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens]
Length = 266
Score = 124 bits (310), Expect = 2e-28
Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)
Query: 59 MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 117
+RVG YQA IPE P + +Y++K G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
Query: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177
Q LG+ + + L LP W IQQ LPDK
Sbjct: 62 QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
Query: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236
I+SLVKY+YSWKKT SRTS+ DRQAR+L ++ DSD+ E + + D PK+E
Sbjct: 95 ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
Score = 68.2 bits (165), Expect = 1e-11
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 366 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 425
DF AIA+VIGNKT+ QVK FFV+Y FNLEEVLQEWEAEQ + G + E + A
Sbjct: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
Query: 426 SNVPSGKSTDEEEEV 440
+ + D E ++
Sbjct: 227 PLLAPAQEEDHEVQI 241
>gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens]
Length = 266
Score = 124 bits (310), Expect = 2e-28
Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)
Query: 59 MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 117
+RVG YQA IPE P + +Y++K G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
Query: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177
Q LG+ + + L LP W IQQ LPDK
Sbjct: 62 QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
Query: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236
I+SLVKY+YSWKKT SRTS+ DRQAR+L ++ DSD+ E + + D PK+E
Sbjct: 95 ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
Score = 68.2 bits (165), Expect = 1e-11
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 366 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 425
DF AIA+VIGNKT+ QVK FFV+Y FNLEEVLQEWEAEQ + G + E + A
Sbjct: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
Query: 426 SNVPSGKSTDEEEEV 440
+ + D E ++
Sbjct: 227 PLLAPAQEEDHEVQI 241
>gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo
sapiens]
Length = 266
Score = 124 bits (310), Expect = 2e-28
Identities = 78/180 (43%), Positives = 101/180 (56%), Gaps = 29/180 (16%)
Query: 59 MRVGAEYQARIPEFDPGA-TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVE 117
+RVG YQA IPE P + +Y++K G+LVWSP H + DAKLD+YI +A EKHGYN+E
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMATEKHGYNIE 61
Query: 118 QALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKT 177
Q LG+ + + L LP W IQQ LPDK
Sbjct: 62 QTLGVDSRGQGAVGTGLW-LPR-----QVW---------------------IQQTLPDKL 94
Query: 178 IASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEETHPMDGNDSDY-DPKKE 236
I+SLVKY+YSWKKT SRTS+ DRQAR+L ++ DSD+ E + + D PK+E
Sbjct: 95 ISSLVKYHYSWKKTHSRTSMTDRQARRLRGCKDKEDSDEFEESRGGLSEGEPDAGHPKRE 154
Score = 68.2 bits (165), Expect = 1e-11
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 366 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 425
DF AIA+VIGNKT+ QVK FFV+Y FNLEEVLQEWEAEQ + G + E + A
Sbjct: 169 DFGAIAEVIGNKTLTQVKTFFVSYWHCFNLEEVLQEWEAEQ--DGARGATVPVEEARRGA 226
Query: 426 SNVPSGKSTDEEEEV 440
+ + D E ++
Sbjct: 227 PLLAPAQEEDHEVQI 241
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 100 bits (250), Expect = 2e-21
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 35/308 (11%)
Query: 147 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQAR--- 203
W+ ++K F + F H K+F I L KT+A V YYY KK + SL+ R R
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRG 491
Query: 204 KLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQ 263
K + Q ++ PM + + +KE +KE E+ + E ++
Sbjct: 492 KSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEE---------KPEVEN-- 540
Query: 264 HRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSA 323
+ + K G +++ VA S AN+ R+ + R + N A
Sbjct: 541 DKEDLLKEKTDDTSGEDNDEKEAVA-SKGRKTANSQGRRKGR----ITRSMANEANSEEA 595
Query: 324 LKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVK 383
+ + + + ES+ RWT EE A +G+ ++G+++ AIA ++G+KTV Q K
Sbjct: 596 ITPQQSAELASMELNESS-----RWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCK 650
Query: 384 NFFVNYRRRFNLEEVLQE----WEAEQGTQASNGDASTLGEETKSASNV-------PSGK 432
NF+ NY++R NL+E+LQ+ E E+ + A E + V SG
Sbjct: 651 NFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGV 710
Query: 433 STDEEEEV 440
S +EEE V
Sbjct: 711 SGNEEEMV 718
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 100 bits (250), Expect = 2e-21
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 35/308 (11%)
Query: 147 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQAR--- 203
W+ ++K F + F H K+F I L KT+A V YYY KK + SL+ R R
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRG 491
Query: 204 KLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQ 263
K + Q ++ PM + + +KE +KE E+ + E ++
Sbjct: 492 KSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEE---------KPEVEN-- 540
Query: 264 HRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSA 323
+ + K G +++ VA S AN+ R+ + R + N A
Sbjct: 541 DKEDLLKEKTDDTSGEDNDEKEAVA-SKGRKTANSQGRRKGR----ITRSMANEANSEEA 595
Query: 324 LKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVK 383
+ + + + ES+ RWT EE A +G+ ++G+++ AIA ++G+KTV Q K
Sbjct: 596 ITPQQSAELASMELNESS-----RWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCK 650
Query: 384 NFFVNYRRRFNLEEVLQE----WEAEQGTQASNGDASTLGEETKSASNV-------PSGK 432
NF+ NY++R NL+E+LQ+ E E+ + A E + V SG
Sbjct: 651 NFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGV 710
Query: 433 STDEEEEV 440
S +EEE V
Sbjct: 711 SGNEEEMV 718
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 93.2 bits (230), Expect = 4e-19
Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 21/299 (7%)
Query: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQA 202
F + WT +K +F+ F H K+F I L K++ V YYY KK + +L+ R
Sbjct: 436 FMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNY 495
Query: 203 RKLANRHNQGDSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSL 262
K R+ Q E+ + + ++ KKE +K+ E+ +
Sbjct: 496 GKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEK-------------- 541
Query: 263 QHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNS 322
+ + + K + T+E A AN+ R+ S+ + A +
Sbjct: 542 EDSKENTKEKDKIDGTAEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAAASAAAA 601
Query: 323 ALKQKMEGGIEEFKPPESNQKIN-ARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQ 381
A ++ + P S + + +RWT EE +A +G+ ++G+++ AIA ++G K+ Q
Sbjct: 602 AATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQ 661
Query: 382 VKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVPSGKSTDEEEEV 440
KNF+ NY+RR NL+ +LQ+ + + + + +V S S E+E++
Sbjct: 662 CKNFYFNYKRRHNLDNLLQQHKQKTSRKPRE------ERDVSQCESVASTVSAQEDEDI 714
Score = 38.9 bits (89), Expect = 0.010
Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 23/125 (18%)
Query: 147 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLA 206
WT E+ + ++ HG+++ I +M+ K+ A +Y+++K+ + +L+ + +K +
Sbjct: 628 WTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKTS 687
Query: 207 NRHNQ---------------GDSDDDV----EETHPMDGNDSDYDPKKE----AKKEGNT 243
+ + D+D+ EE +P D P ++ A GNT
Sbjct: 688 RKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPSEDSPENATSRGNT 747
Query: 244 EQPVQ 248
E V+
Sbjct: 748 EPAVE 752
>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
Length = 668
Score = 64.7 bits (156), Expect = 2e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 59 MRVGAEYQARIPE-FDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKE------- 110
+RVG +YQA IP+ G + ++ M VW P + + D ++D+++ +A+
Sbjct: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
Query: 111 -------------------KHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
+ A+ L + +++ K+++ L P P +
Sbjct: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
Query: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
EW+ + +LFE+A +GK F+ I+Q LP K++AS+V++YY WK T
Sbjct: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
Score = 29.6 bits (65), Expect = 5.8
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 348 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRR--RFNLEEVLQEWEA 404
W+ E +L + + KYGKDF I D + K++ + F+ ++ R+ ++ L+ EA
Sbjct: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
Query: 405 E 405
+
Sbjct: 328 D 328
>gi|94721313 mesoderm induction early response 1, family member 3
[Homo sapiens]
Length = 549
Score = 64.7 bits (156), Expect = 2e-10
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 44 EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99
E +SG S +D M +G +YQA IP E+D Y ++D L+W P + ++
Sbjct: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216
Query: 100 KLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142
K+ EY+ I+ H + EQAL L HNI++++ +
Sbjct: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276
Query: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201
WT E+ FE A GK FH IQ+ + +T+A V +YY WKK+ R +Q
Sbjct: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335
Query: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226
R R+N D V+ET + G
Sbjct: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 64.3 bits (155), Expect = 2e-10
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 59 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYI--------AIAKE 110
+ +G +QA IPE + D LVW P+ + + L + + + A
Sbjct: 781 INIGLRFQAEIPELQDISALAQDTHKA-TLVWKPWPELENHDLQQRVENLLNLCCSSALP 839
Query: 111 KHGYNVEQALGMLFWHKHNIEKSLADLPNFTPF--------------PDEWTVEDKVLFE 156
G N E AL LF K ++ +L L P D+WT ++ LF
Sbjct: 840 GGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFN 899
Query: 157 QAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDD 216
+A + + K F +Q+M+ KT+A V+YYY+WKK L + +LA + + +
Sbjct: 900 KALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKI---MRLGRKHRTRLAEIIDDCVTSE 956
Query: 217 DVEETHPMDGNDSDYDPKKEAKKEGNTEQP 246
+ EE + D + D +++ KE +E P
Sbjct: 957 EEEELEEEEEEDPEED--RKSTKEEESEVP 984
Score = 35.0 bits (79), Expect = 0.14
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 347 RWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQ 406
+WT+ E+ L + + Y KDF + ++ +KTV Q ++ +++ L + AE
Sbjct: 889 KWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEI 948
Query: 407 GTQASNGDASTLGEETKSASNVPSGKSTDEEE 438
+ EE + KST EEE
Sbjct: 949 IDDCVTSEEEEELEEEEEEDPEEDRKSTKEEE 980
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 64.3 bits (155), Expect = 2e-10
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 59 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPY-----HSIPDAKLDEYIAIAKEK-- 111
+ +G+ +QA IPE + TD ++ LVW P+ S ++ E +A
Sbjct: 1074 INIGSRFQAEIPELQERSLAGTD-EHVASLVWKPWGDMMISSETQDRVTELCNVACSSVM 1132
Query: 112 --HGYNVEQALGMLFWHKHNIEKSLADLPNFTPFP--------------DEWTVEDKVLF 155
G N+E AL L + N++ +L L P D WT +K LF
Sbjct: 1133 PGGGTNLELALHCLHEAQGNVQVALETLLLRGPHKPRTHLLADYRYTGSDVWTPIEKRLF 1192
Query: 156 EQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 190
++AF H K F+ I +M+ KT+A V+YYY WKK
Sbjct: 1193 KKAFYAHKKDFYLIHKMIQTKTVAQCVEYYYIWKK 1227
>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
Length = 515
Score = 62.8 bits (151), Expect = 6e-10
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 34/167 (20%)
Query: 59 MRVGAEYQARIPEFD-PGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGY--- 114
+RVG YQA IPE G + ++ + VW P + D ++D+++ +A+ +
Sbjct: 150 IRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFARA 209
Query: 115 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
+V Q A+ L+ H +++ +++ L P P +
Sbjct: 210 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEME 269
Query: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
EW+ + LFE+A +GK F+ I+Q LP K++ S+++YYY WK T
Sbjct: 270 EWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTT 316
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 61.6 bits (148), Expect = 1e-09
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 44 EPESGCSSDDEHDV--------GMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHS 95
EP S SSD E D + VG ++QA + +N L+W P
Sbjct: 174 EPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQLLWDP-SV 232
Query: 96 IPDAKLDEYIAIAKEKHGYNV--------------EQALGMLFWHKHNIEKSLADLP-NF 140
+P+ +++E++ A ++ + + EQAL L N+E++L L N
Sbjct: 233 LPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNV 292
Query: 141 TPFPD---EWTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTS 196
D W+ E+ FE F HGK+FH IQ + +++ V+YYY WKK+ R
Sbjct: 293 KVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKS-ERYD 351
Query: 197 LMDRQARKLANRHNQGDSDDDVEETHPMDGNDSD 230
+Q R L R D ++ +DG+D D
Sbjct: 352 YFAQQTR-LGRRKYVPSGTTDADQ--DLDGSDPD 382
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 57.4 bits (137), Expect = 3e-08
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 59 MRVGAEYQARIPEF-DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGY--- 114
+RVG YQA I + G D+ VW ++ + D ++D+++ +A+ +
Sbjct: 167 IRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARA 226
Query: 115 -----NVEQ------------------ALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
+V Q A+ L + ++I K+++ L P P +
Sbjct: 227 LDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEME 286
Query: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
EW+ + LFE+A +GK F IQQ LP K++ S+++YYY WK T
Sbjct: 287 EWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTT 333
>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 51.6 bits (122), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 59 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAK-----LDEYIAIAKEK-- 111
+ VG+ +QA IP A D LVW P+ + ++ +++ + A
Sbjct: 723 INVGSRFQAEIPLMRDRALAAADPHKAD-LVWQPWEDLESSREKQRQVEDLLTAACSSIF 781
Query: 112 --HGYNVEQALGMLFWHKHNIEKSLADL-------PNFTPFP-------DEWTVEDKVLF 155
G N E AL L + +I ++L L P+ P D+W + ++ LF
Sbjct: 782 PGAGTNQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLF 841
Query: 156 EQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 190
+ + + K F +Q+++ KT+A V++YY++KK
Sbjct: 842 NKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKK 876
Score = 34.3 bits (77), Expect = 0.24
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 347 RWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNL 395
+W E+ L +G+ Y KDF + +I KTV Q F+ Y+++ +
Sbjct: 832 QWKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQVKI 880
>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 51.6 bits (122), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 59 MRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAK-----LDEYIAIAKEK-- 111
+ VG+ +QA IP A D LVW P+ + ++ +++ + A
Sbjct: 723 INVGSRFQAEIPLMRDRALAAADPHKAD-LVWQPWEDLESSREKQRQVEDLLTAACSSIF 781
Query: 112 --HGYNVEQALGMLFWHKHNIEKSLADL-------PNFTPFP-------DEWTVEDKVLF 155
G N E AL L + +I ++L L P+ P D+W + ++ LF
Sbjct: 782 PGAGTNQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLF 841
Query: 156 EQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKK 190
+ + + K F +Q+++ KT+A V++YY++KK
Sbjct: 842 NKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKK 876
Score = 34.3 bits (77), Expect = 0.24
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 347 RWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNL 395
+W E+ L +G+ Y KDF + +I KTV Q F+ Y+++ +
Sbjct: 832 QWKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQVKI 880
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 51.2 bits (121), Expect = 2e-06
Identities = 69/286 (24%), Positives = 109/286 (38%), Gaps = 40/286 (13%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 183 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 238
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 239 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 298
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 357
Query: 200 RQARKLANRHNQGDSDDDVEETHP--MDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRR 257
+Q R ++N HP D D D + A P S +
Sbjct: 358 QQTRFGKKKYN----------LHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQS 407
Query: 258 EYQSLQHRHHSQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQL 303
E + +Q G L +E+V N IL+ L
Sbjct: 408 EKEDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGILQML 453
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 174 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 229
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 230 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 284
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 285 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 343
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 344 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 403
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 404 NSQSEKEDGTV 414
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 103 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 158
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 159 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 218
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 277
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 278 QQTRFGKKKYN 288
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 94 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 149
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 150 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 204
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 205 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 263
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 264 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 323
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 324 NSQSEKEDGTV 334
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 139 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 194
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 195 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 254
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 255 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 313
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 314 QQTRFGKKKYN 324
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 130 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 185
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 186 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 240
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 241 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 299
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 300 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 359
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 360 NSQSEKEDGTV 370
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 183 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 238
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 239 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 298
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 357
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 358 QQTRFGKKKYN 368
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 174 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 229
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 230 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 284
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 285 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 343
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 344 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 403
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 404 NSQSEKEDGTV 414
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 166 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 221
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 222 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 281
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 282 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 340
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 341 QQTRFGKKKYN 351
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 157 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 212
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 213 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 267
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 268 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 326
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 327 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 386
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 387 NSQSEKEDGTV 397
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 219 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 274
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 275 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 334
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 335 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 393
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 394 QQTRFGKKKYN 404
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 210 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 265
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 266 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 320
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 321 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 379
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 380 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 439
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 440 NSQSEKEDGTV 450
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 183 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 238
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 239 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 298
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 299 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 357
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 358 QQTRFGKKKYN 368
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 174 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 229
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 230 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 284
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 285 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 343
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 344 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 403
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 404 NSQSEKEDGTV 414
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 166 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 221
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 222 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 281
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 282 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 340
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 341 QQTRFGKKKYN 351
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 157 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 212
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 213 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 267
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 268 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 326
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 327 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 386
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 387 NSQSEKEDGTV 397
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 219 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 274
Query: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 275 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 334
Query: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 335 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 393
Query: 200 RQARKLANRHN 210
+Q R ++N
Sbjct: 394 QQTRFGKKKYN 404
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 210 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 265
Query: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 266 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 320
Query: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 321 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 379
Query: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 380 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 439
Query: 430 SGKSTDEEEEV 440
+ +S E+ V
Sbjct: 440 NSQSEKEDGTV 450
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,535,493
Number of Sequences: 37866
Number of extensions: 859701
Number of successful extensions: 4634
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 4266
Number of HSP's gapped (non-prelim): 353
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.