Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACBD4 Sequence: fasta or formatted (341aa) NCBI GI: 209364594
Description:

acyl-Coenzyme A binding domain containing 4 isoform 1

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [305aa] acyl-Coenzyme A binding domain containing 4 isoform 2
alt mRNA [341aa] acyl-Coenzyme A binding domain containing 4 isoform 1
alt prot [305aa] acyl-Coenzyme A binding domain containing 4 isoform 2
alt prot [268aa] acyl-Coenzyme A binding domain containing 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         19           2
 C cysteine            5.3         18           2
 D aspartate           2.3          8           1
 E glutamate           5.6         19           2
 F phenylalanine       2.9         10           1
 G glycine             9.7         33           1
 H histidine           1.2          4           1
 I isoleucine          2.3          8           1
 K lysine              3.5         12           1
 L leucine             6.2         21           1
 M methionine          2.3          8           1
 N asparagine          1.2          4           1
 P proline            12.3         42           2
 Q glutamine           4.4         15           1
 R arginine            8.8         30           2
 S serine             10.9         37           4
 T threonine           3.5         12           1
 V valine              5.3         18           2
 W tryptophan          3.8         13           1
 Y tyrosine            2.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A binding domain containing 4 isoform... 
ACBD4                 1.000   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.653   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.478   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.478   acyl-Coenzyme A binding domain containing 4 isoform ...
ACBD5                 0.172   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.172   acyl-Coenzyme A binding domain containing 5 isoform...
DBI                   0.067   diazepam binding inhibitor isoform 3 
DBI                   0.067   diazepam binding inhibitor isoform 1 
PECI                  0.067   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
DBI                   0.064   diazepam binding inhibitor isoform 2 
ACBD6                 0.050   acyl-coenzyme A binding domain containing 6 
ACBD7                 0.042   acyl-Coenzyme A binding domain containing 7 
ACBD3                 0.035   acyl-Coenzyme A binding domain containing 3 
LOC645877             0.022   PREDICTED: similar to hCG1652800 
LOC645877             0.022   PREDICTED: similar to hCG1652800 
LOC645877             0.022   PREDICTED: similar to diazepam binding inhibitor [Ho...
LOC100292688          0.019   PREDICTED: hypothetical protein 
TOMM40                0.019   translocase of outer mitochondrial membrane 40 [Hom...
TOMM40                0.019   translocase of outer mitochondrial membrane 40 [Hom...
TOMM40                0.019   translocase of outer mitochondrial membrane 40 
COL5A3                0.018   collagen, type V, alpha 3 preproprotein 
GPRIN1                0.017   G protein-regulated inducer of neurite outgrowth 1 ...
LOC729370             0.015   PREDICTED: hypothetical protein 
SSPO                  0.015   SCO-spondin 
KRTAP5-5              0.015   keratin associated protein 5-5 
LOC100290265          0.015   PREDICTED: hypothetical protein XP_002346787 
NOTCH3                0.014   Notch homolog 3 
COL1A2                0.014   alpha 2 type I collagen 
COLEC12               0.014   collectin sub-family member 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press