Guide to the Human Genome
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Name: TOMM40 Sequence: fasta or formatted (361aa) NCBI GI: 193083120
Description:

translocase of outer mitochondrial membrane 40

Referenced in:

Mitochondria

Other entries for this name:
alt mRNA [361aa] translocase of outer mitochondrial membrane 40
alt mRNA [361aa] translocase of outer mitochondrial membrane 40
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         31           2
 C cysteine            1.7          6           1
 D aspartate           2.8         10           1
 E glutamate           4.2         15           2
 F phenylalanine       3.9         14           1
 G glycine            11.6         42           2
 H histidine           2.8         10           1
 I isoleucine          2.2          8           1
 K lysine              4.2         15           2
 L leucine            11.1         40           2
 M methionine          1.9          7           1
 N asparagine          4.4         16           2
 P proline             8.6         31           5
 Q glutamine           4.4         16           2
 R arginine            2.5          9           2
 S serine              7.8         28           2
 T threonine           7.2         26           1
 V valine              6.9         25           1
 W tryptophan          0.8          3           1
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of outer mitochondrial membrane 40 [Hom... 
TOMM40                1.000   translocase of outer mitochondrial membrane 40 [Hom...
TOMM40                1.000   translocase of outer mitochondrial membrane 40 
TOMM40L               0.524   translocase of outer mitochondrial membrane 40 homol...
TAF4                  0.034   TBP-associated factor 4 
RICH2                 0.031   Rho GTPase-activating protein RICH2 
SYVN1                 0.031   synoviolin 1 isoform a 
R3HDM1                0.031   R3H domain containing 1 
WASF3                 0.031   WAS protein family, member 3 
FMN1                  0.029   formin 1 
FOXK1                 0.029   forkhead box K1 
RANBP9                0.029   RAN binding protein 9 
DIAPH2                0.029   diaphanous 2 isoform 12C 
DIAPH2                0.029   diaphanous 2 isoform 156 
ENAH                  0.028   enabled homolog isoform a 
ENAH                  0.028   enabled homolog isoform b 
FHOD3                 0.028   formin homology 2 domain containing 3 
HCN2                  0.028   hyperpolarization activated cyclic nucleotide-gated...
LMOD2                 0.028   leiomodin 2 (cardiac) 
CRTC1                 0.028   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.028   mucoepidermoid carcinoma translocated 1 isoform 1 [...
SETD1B                0.028   SET domain containing 1B 
FMNL1                 0.028   formin-like 1 
WASL                  0.027   Wiskott-Aldrich syndrome gene-like protein 
EIF3F                 0.027   eukaryotic translation initiation factor 3, subunit 5...
FHDC1                 0.027   FH2 domain containing 1 
ACR                   0.027   acrosin precursor 
SYVN1                 0.025   synoviolin 1 isoform b 
WAS                   0.025   Wiskott-Aldrich syndrome protein 
VASP                  0.025   vasodilator-stimulated phosphoprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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