Guide to the Human Genome
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Name: ACBD5 Sequence: fasta or formatted (490aa) NCBI GI: 109689720
Description:

acyl-Coenzyme A binding domain containing 5 isoform 2

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [525aa] acyl-Coenzyme A binding domain containing 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         23           2
 C cysteine            0.6          3           1
 D aspartate           6.1         30           2
 E glutamate           9.4         46           4
 F phenylalanine       3.1         15           1
 G glycine             9.2         45           2
 H histidine           2.2         11           1
 I isoleucine          4.3         21           2
 K lysine              6.1         30           2
 L leucine             5.9         29           2
 M methionine          3.5         17           2
 N asparagine          4.9         24           2
 P proline             4.1         20           2
 Q glutamine           5.9         29           1
 R arginine            5.3         26           4
 S serine              9.4         46           3
 T threonine           5.3         26           1
 V valine              5.9         29           2
 W tryptophan          1.6          8           2
 Y tyrosine            2.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A binding domain containing 5 isoform... 
ACBD5                 1.000   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD4                 0.129   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.129   acyl-Coenzyme A binding domain containing 4 isoform ...
ACBD4                 0.128   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.128   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.128   acyl-Coenzyme A binding domain containing 4 isoform...
PECI                  0.056   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
DBI                   0.043   diazepam binding inhibitor isoform 1 
DBI                   0.042   diazepam binding inhibitor isoform 3 
DBI                   0.041   diazepam binding inhibitor isoform 2 
ACBD6                 0.035   acyl-coenzyme A binding domain containing 6 
ACBD7                 0.026   acyl-Coenzyme A binding domain containing 7 
ACBD3                 0.025   acyl-Coenzyme A binding domain containing 3 
KRT9                  0.020   keratin 9 
HRNR                  0.019   hornerin 
GJA8                  0.016   connexin 50 
DSPP                  0.015   dentin sialophosphoprotein preproprotein 
LOC645877             0.013   PREDICTED: similar to hCG1652800 
LOC645877             0.013   PREDICTED: similar to hCG1652800 
LOC645877             0.013   PREDICTED: similar to diazepam binding inhibitor [Ho...
CDC2L2                0.012   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.012   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FUS                   0.012   fusion (involved in t(12;16) in malignant liposarcoma...
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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