Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACBD4 Sequence: fasta or formatted (268aa) NCBI GI: 209364600
Description:

acyl-Coenzyme A binding domain containing 4 isoform 3

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [305aa] acyl-Coenzyme A binding domain containing 4 isoform 2
alt prot [341aa] acyl-Coenzyme A binding domain containing 4 isoform 1
alt prot [305aa] acyl-Coenzyme A binding domain containing 4 isoform 2
alt prot [341aa] acyl-Coenzyme A binding domain containing 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         16           2
 C cysteine            4.5         12           1
 D aspartate           3.7         10           1
 E glutamate           9.0         24           2
 F phenylalanine       3.0          8           1
 G glycine             7.5         20           1
 H histidine           1.1          3           1
 I isoleucine          2.2          6           1
 K lysine              4.1         11           1
 L leucine             6.7         18           1
 M methionine          3.0          8           1
 N asparagine          1.5          4           1
 P proline            11.2         30           2
 Q glutamine           4.5         12           1
 R arginine            8.6         23           2
 S serine              7.8         21           2
 T threonine           3.4          9           1
 V valine              6.0         16           2
 W tryptophan          2.6          7           1
 Y tyrosine            3.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A binding domain containing 4 isoform... 
ACBD4                 0.853   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.853   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.704   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.704   acyl-Coenzyme A binding domain containing 4 isoform ...
ACBD5                 0.225   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.225   acyl-Coenzyme A binding domain containing 5 isoform...
DBI                   0.087   diazepam binding inhibitor isoform 3 
DBI                   0.087   diazepam binding inhibitor isoform 1 
PECI                  0.087   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
DBI                   0.083   diazepam binding inhibitor isoform 2 
ACBD6                 0.065   acyl-coenzyme A binding domain containing 6 
ACBD7                 0.054   acyl-Coenzyme A binding domain containing 7 
ACBD3                 0.045   acyl-Coenzyme A binding domain containing 3 
LOC645877             0.029   PREDICTED: similar to hCG1652800 
LOC645877             0.029   PREDICTED: similar to hCG1652800 
LOC645877             0.029   PREDICTED: similar to diazepam binding inhibitor [Ho...
SSPO                  0.016   SCO-spondin 
TOX4                  0.016   epidermal Langerhans cell protein LCP1 
CPSF4                 0.015   cleavage and polyadenylation specific factor 4, 30kDa...
GEFT                  0.015   RhoA/RAC/CDC42 exchange factor isoform 1 
GEFT                  0.015   RhoA/RAC/CDC42 exchange factor isoform 3 
HIVEP3                0.013   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.013   human immunodeficiency virus type I enhancer bindin...
ZBTB10                0.013   zinc finger and BTB domain containing 10 isoform b ...
ZBTB10                0.013   zinc finger and BTB domain containing 10 isoform a ...
KIAA1543              0.013   NEZHA isoform 2 
KIAA1543              0.013   NEZHA isoform 1 
PLEKHG4               0.013   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.013   pleckstrin homology domain containing, family G (wi...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press