Guide to the Human Genome
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Name: ACBD6 Sequence: fasta or formatted (282aa) NCBI GI: 14150169
Description:

acyl-coenzyme A binding domain containing 6

Referenced in:

Ankyrin Family
Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         23           3
 C cysteine            2.8          8           1
 D aspartate           6.4         18           2
 E glutamate           9.6         27           2
 F phenylalanine       3.2          9           2
 G glycine             7.8         22           2
 H histidine           3.2          9           1
 I isoleucine          4.6         13           1
 K lysine              7.1         20           2
 L leucine             9.2         26           3
 M methionine          0.7          2           1
 N asparagine          3.9         11           2
 P proline             4.3         12           1
 Q glutamine           5.0         14           1
 R arginine            3.2          9           1
 S serine              6.7         19           2
 T threonine           4.6         13           2
 V valine              5.7         16           2
 W tryptophan          1.4          4           1
 Y tyrosine            2.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-coenzyme A binding domain containing 6 
BCORL1                0.090   BCL6 co-repressor-like 1 
DBI                   0.085   diazepam binding inhibitor isoform 2 
DBI                   0.085   diazepam binding inhibitor isoform 3 
DBI                   0.085   diazepam binding inhibitor isoform 1 
PPP1R12B              0.081   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.081   protein phosphatase 1, regulatory (inhibitor) subunit...
EHMT1                 0.081   euchromatic histone-lysine N-methyltransferase 1 is...
PECI                  0.079   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
TNKS2                 0.079   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
BCOR                  0.079   BCL-6 interacting corepressor isoform a 
BCOR                  0.079   BCL-6 interacting corepressor isoform c 
BCOR                  0.079   BCL-6 interacting corepressor isoform b 
BCOR                  0.079   BCL-6 interacting corepressor isoform a 
ANKDD1B               0.077   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1B               0.077   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1B               0.077   PREDICTED: ankyrin repeat and death domain containi...
ANKRD44               0.077   ankyrin repeat domain 44 
ANKRD7                0.076   ankyrin repeat domain 7 
ANKRD26               0.076   ankyrin repeat domain 26 
ANKRD27               0.074   ankyrin repeat domain 27 (VPS9 domain) 
OSTF1                 0.074   osteoclast stimulating factor 1 
ANK3                  0.072   ankyrin 3 isoform 1 
TNKS                  0.072   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PPP1R16B              0.072   protein phosphatase 1 regulatory inhibitor subunit 1...
HECTD1                0.072   HECT domain containing 1 
LOC730465             0.072   PREDICTED: similar to hCG1793014 
PPP1R12A              0.070   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.070   protein phosphatase 1, regulatory (inhibitor) subunit...
LOC100132257          0.070   PREDICTED: similar to Putative ankyrin repeat domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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