Guide to the Human Genome
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Name: ACBD5 Sequence: fasta or formatted (525aa) NCBI GI: 203098629
Description:

acyl-Coenzyme A binding domain containing 5 isoform 1

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [490aa] acyl-Coenzyme A binding domain containing 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         25           2
 C cysteine            1.3          7           4
 D aspartate           6.1         32           2
 E glutamate           9.1         48           4
 F phenylalanine       3.2         17           1
 G glycine             9.0         47           2
 H histidine           2.5         13           1
 I isoleucine          4.2         22           2
 K lysine              5.7         30           2
 L leucine             6.3         33           2
 M methionine          3.4         18           2
 N asparagine          4.6         24           2
 P proline             4.2         22           2
 Q glutamine           5.9         31           1
 R arginine            5.3         28           4
 S serine              9.3         49           3
 T threonine           5.0         26           1
 V valine              5.5         29           2
 W tryptophan          2.3         12           2
 Y tyrosine            2.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A binding domain containing 5 isoform... 
ACBD5                 0.919   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD4                 0.118   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.118   acyl-Coenzyme A binding domain containing 4 isoform ...
ACBD4                 0.118   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.118   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.118   acyl-Coenzyme A binding domain containing 4 isoform...
PECI                  0.051   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
DBI                   0.040   diazepam binding inhibitor isoform 1 
DBI                   0.039   diazepam binding inhibitor isoform 3 
DBI                   0.038   diazepam binding inhibitor isoform 2 
ACBD6                 0.033   acyl-coenzyme A binding domain containing 6 
ACBD7                 0.024   acyl-Coenzyme A binding domain containing 7 
ACBD3                 0.023   acyl-Coenzyme A binding domain containing 3 
KRT9                  0.018   keratin 9 
HRNR                  0.017   hornerin 
GJA8                  0.015   connexin 50 
DSPP                  0.014   dentin sialophosphoprotein preproprotein 
LOC645877             0.012   PREDICTED: similar to hCG1652800 
LOC645877             0.012   PREDICTED: similar to hCG1652800 
LOC645877             0.012   PREDICTED: similar to diazepam binding inhibitor [Ho...
CDC2L2                0.011   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.011   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FUS                   0.011   fusion (involved in t(12;16) in malignant liposarcoma...
DMP1                  0.010   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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