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Search of human proteins with 208431771
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|208431771 basophilic leukemia expressed protein BLES03
isoform 1 [Homo sapiens]
(293 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|208431771 basophilic leukemia expressed protein BLES03 isofor... 601 e-172
gi|208431769 basophilic leukemia expressed protein BLES03 isofor... 595 e-170
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 37 0.027
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 37 0.027
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 37 0.027
gi|27734897 hypothetical protein LOC203111 [Homo sapiens] 36 0.046
gi|9966841 cell death regulator aven [Homo sapiens] 35 0.078
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 34 0.13
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 34 0.13
gi|31044432 LEM domain containing 2 isoform 1 [Homo sapiens] 33 0.23
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 33 0.39
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 33 0.39
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 33 0.39
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 32 0.66
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 32 0.87
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 31 1.5
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens] 30 1.9
gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo ... 30 1.9
gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo ... 30 1.9
gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo ... 30 1.9
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 1.9
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 30 2.5
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 30 2.5
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 30 2.5
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 30 2.5
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 30 2.5
gi|10863889 squamous cell carcinoma antigen recognized by T cell... 30 2.5
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 30 2.5
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 30 2.5
>gi|208431771 basophilic leukemia expressed protein BLES03 isoform 1
[Homo sapiens]
Length = 293
Score = 601 bits (1549), Expect = e-172
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED
Sbjct: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
Query: 61 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 120
GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW
Sbjct: 61 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 120
Query: 121 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 180
IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK
Sbjct: 121 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 180
Query: 181 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 240
LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK
Sbjct: 181 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 240
Query: 241 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 293
CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT
Sbjct: 241 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 293
>gi|208431769 basophilic leukemia expressed protein BLES03 isoform 2
[Homo sapiens]
Length = 292
Score = 595 bits (1533), Expect = e-170
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 1/293 (0%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGR RMEPGEELEEEGSPGGRED
Sbjct: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGR-RMEPGEELEEEGSPGGRED 59
Query: 61 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 120
GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW
Sbjct: 60 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 119
Query: 121 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 180
IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK
Sbjct: 120 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 179
Query: 181 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 240
LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK
Sbjct: 180 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 239
Query: 241 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 293
CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT
Sbjct: 240 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 292
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 36.6 bits (83), Expect = 0.027
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 26/119 (21%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
MAAAAAAA A GG G+ P + R G G E G EG+PGG D
Sbjct: 1 MAAAAAAAAAAGAAGGRGSGPGRRRHLVPGAGG----------EAG-----EGAPGGAGD 45
Query: 61 ---GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSE 116
G +E L E + + +P P E + + PP G+P S+
Sbjct: 46 YGNGLESEELEPEELLLEPEP--------EPEPEEEPPRPRAPPGAPGPGPGSGAPGSQ 96
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 36.6 bits (83), Expect = 0.027
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVER--------SEGRSRMEPGEELEEEG 53
A+AA AA A G GG G P R G ER S GRS+ E +G
Sbjct: 162 ASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDG 221
Query: 54 SPGGRE 59
GG E
Sbjct: 222 QRGGSE 227
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 36.6 bits (83), Expect = 0.027
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVER--------SEGRSRMEPGEELEEEG 53
A+AA AA A G GG G P R G ER S GRS+ E +G
Sbjct: 162 ASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDG 221
Query: 54 SPGGRE 59
GG E
Sbjct: 222 QRGGSE 227
>gi|27734897 hypothetical protein LOC203111 [Homo sapiens]
Length = 374
Score = 35.8 bits (81), Expect = 0.046
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 18 GAEPRQERSRAR----GWAGVERSEGRSRMEPGEELEEEG--SPGGREDGFTAEHLAAEA 71
G +P QE+ A+ G ++S + +PGE LEE G PGG+ED AE +A
Sbjct: 75 GVKPLQEQPLAKDVAPGRDATDQSGSTEKTQPGEGLEESGPPQPGGKEDAPAAEGKKKDA 134
Query: 72 MAADMDPWLVFDARTTP 88
A L +A P
Sbjct: 135 GAGTEAESLKGNAEAQP 151
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 35.0 bits (79), Expect = 0.078
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 3 AAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEG------RSRMEPG 46
AAAA A G G GGG R+ R R RG+ G G SR EPG
Sbjct: 31 AAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPG 80
Score = 29.3 bits (64), Expect = 4.3
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 13 GRGGGGAEPRQERSRARGW---AGVERSEGRSRMEPGEELEEEGSPGGRE 59
GRGGGGA PR R GW A + GEE +E+G+ R+
Sbjct: 65 GRGGGGA-PRGSRREPGGWGAGASAPVEDDSDAETYGEENDEQGNYSKRK 113
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 100 PPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQ 159
PP +T + + P+GW + Y G S S D G ++W L+ I TLR
Sbjct: 1510 PPPGLTNPKPSSTWGASPLGWTSSYSSG-SAWSTDTSGRTSSWLVLRNLTPQIDGSTLRT 1568
Query: 160 LAITH 164
L + H
Sbjct: 1569 LCLQH 1573
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 100 PPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQ 159
PP +T + + P+GW + Y G S S D G ++W L+ I TLR
Sbjct: 1474 PPPGLTNPKPSSTWGASPLGWTSSYSSG-SAWSTDTSGRTSSWLVLRNLTPQIDGSTLRT 1532
Query: 160 LAITH 164
L + H
Sbjct: 1533 LCLQH 1537
>gi|31044432 LEM domain containing 2 isoform 1 [Homo sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.23
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 29/128 (22%)
Query: 34 VERSEGRSRMEPGEELEEEGSPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELD 93
+ R G +R+ E L EE P G E L EA + P A +P E
Sbjct: 35 LRRLRGEARLRDEERLREEARPRGEE------RLREEARLREDAPLRARPAAASPRAE-- 86
Query: 94 AWLAKYPPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAAWEALQTSGRPIT 153
WL++ P+ + Y PG+ GD++ A+W + P
Sbjct: 87 PWLSQ--PASGSAYATPGA-------------------YGDIRPSAASWVGSRGLAYPAR 125
Query: 154 PGTLRQLA 161
P LR+ A
Sbjct: 126 PAQLRRRA 133
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 32.7 bits (73), Expect = 0.39
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 35/179 (19%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRS-RMEPGE------ELEEEG 53
+AAAAAAA A G GGGG S G R +G M PG G
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGS--SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 54 SPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSP 113
S G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 339 SAAGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAP 388
Query: 114 NSEPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 156
P G A G G + G AW A Q P ++PGT
Sbjct: 389 PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 32.7 bits (73), Expect = 0.39
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 35/179 (19%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRS-RMEPGE------ELEEEG 53
+AAAAAAA A G GGGG S G R +G M PG G
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGS--SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 54 SPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSP 113
S G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 339 SAAGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAP 388
Query: 114 NSEPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 156
P G A G G + G AW A Q P ++PGT
Sbjct: 389 PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 32.7 bits (73), Expect = 0.39
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 35/179 (19%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRS-RMEPGE------ELEEEG 53
+AAAAAAA A G GGGG S G R +G M PG G
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGS--SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 54 SPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSP 113
S G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 339 SAAGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAP 388
Query: 114 NSEPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 156
P G A G G + G AW A Q P ++PGT
Sbjct: 389 PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 32.0 bits (71), Expect = 0.66
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 6 AAAVAGVGRGGGGAEPRQERS---RARGWAGVERSEGRSRMEPGE----ELEEEGSPGGR 58
AAA GGGG +P++ R+ R RGW + R ++ GE +L ++G G +
Sbjct: 185 AAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKAGKKLRQQGEKGRK 244
Query: 59 EDGFTAEHLAA 69
+ + AA
Sbjct: 245 KPRRRGQKAAA 255
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 31.6 bits (70), Expect = 0.87
Identities = 20/55 (36%), Positives = 22/55 (40%)
Query: 11 GVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDGFTAE 65
G GG E + ER E EG E GE EEEG G E+G E
Sbjct: 812 GEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGE 866
Score = 28.9 bits (63), Expect = 5.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 11 GVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
G G G E +E +G E EG E GE E+G G E+
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
Score = 28.5 bits (62), Expect = 7.3
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 13 GRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEEL-EEEGSPGGREDG 61
G G G E E G E EG E GEE EEEG G E+G
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGE--GEEEG 1009
Score = 28.1 bits (61), Expect = 9.6
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 11 GVGRG---GGGAEPRQERSRARGWAGVERSEGRSRME-PGEELEEEGSPGGREDG 61
G G+G G E +E G E EG E GE EEEG G E+G
Sbjct: 854 GEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEG 908
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDG 61
AA A A RG GG +PR ++ A G SE + G+E E P R
Sbjct: 642 AAEKAWATGATSRGSGGKQPRWQKPAAAG------SESSAAAAVGQEAEARKKPRRRRAK 695
Query: 62 FTAEHLAAEAMAADMDPW 79
+ + A ++PW
Sbjct: 696 SRGD--GGQNAAVGINPW 711
Score = 29.6 bits (65), Expect = 3.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 5 AAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDG 61
AA + G R GGG +PR+ +AR A +E R + G + R G
Sbjct: 434 AAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGG 490
>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
Length = 751
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 121 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPG-TLRQLAITHHVLSGK 170
+A G+G +P S Q Q W+A + S + P +R + I+ H+ SGK
Sbjct: 9 VAALGRGRAPASLGWQRKQVNWKACRWSSSGVIPNEKIRNIGISAHIDSGK 59
>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
Length = 498
Score = 30.4 bits (67), Expect = 1.9
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVE------RSEGRSRMEPGEELEEEGS 54
MAAAAAAA +G G GGG E +E+S + G++ + + + E E E
Sbjct: 1 MAAAAAAAPSG-GGGGGEEERLEEKSEDQDLQGLKDKPLKFKKVKKDKKEEKEGKHEPVQ 59
Query: 55 PGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPN 114
P AE AE V +A +P + P Y DP
Sbjct: 60 PSAHHSAEPAEAGKAETSEGSGSAPAVPEASASPKQRRSIIRDRGP-----MYDDP---- 110
Query: 115 SEPVGW 120
+ P GW
Sbjct: 111 TLPEGW 116
>gi|239754074 PREDICTED: hypothetical protein XP_002345859 [Homo
sapiens]
Length = 103
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDG 61
A A G R GGGA PR R R E EG R E G GG E G
Sbjct: 3 ACVRAREGSAREGGGAGPRIRARRGRSEEEEEEEEGGGR--------EGGGGGGGESG 52
>gi|239748601 PREDICTED: hypothetical protein XP_002346737 [Homo
sapiens]
Length = 103
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDG 61
A A G R GGGA PR R R E EG R E G GG E G
Sbjct: 3 ACVRAREGSAREGGGAGPRIRARRGRSEEEEEEEEGGGR--------EGGGGGGGESG 52
>gi|239742618 PREDICTED: hypothetical protein XP_002342573 [Homo
sapiens]
Length = 103
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDG 61
A A G R GGGA PR R R E EG R E G GG E G
Sbjct: 3 ACVRAREGSAREGGGAGPRIRARRGRSEEEEEEEEGGGR--------EGGGGGGGESG 52
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 30.4 bits (67), Expect = 1.9
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 10 AGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDGFTAEHLAA 69
AG GG AE + R R+ A +GRS PG G+ GGR G
Sbjct: 1275 AGTAISGGKAEGEKGRRRSSP-ARSRIKQGRSSSFPGRRRPRGGAHGGRGRG----RARL 1329
Query: 70 EAMAADMDPWLVFDARTTPATE 91
++ A+ ++ +V D ++P+ E
Sbjct: 1330 KSTASSIETLVVADIDSSPSKE 1351
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGG 57
AAAAAA V G GGGG + G G S P GS GG
Sbjct: 63 AAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGG 57
AAAAAA V G GGGG + G G S P GS GG
Sbjct: 63 AAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/56 (35%), Positives = 21/56 (37%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGG 57
AAAAAA V G GGGG + G G S P GS GG
Sbjct: 63 AAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 22 RQERSRARGWAGVERSEGRSRMEPGEELEE--EGSPGGREDGFTAEHLAAEAMAAD 75
RQE A GW +E+ E + P E LEE EG G E+ E +A D
Sbjct: 360 RQEEEEAEGWEELEQQEAEVQ-GPPEALEETGEGRRGAEEEDLGEEEEEGQAHLED 414
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 30.0 bits (66), Expect = 2.5
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 18 GAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGREDGFTAEHLAAEAMAADMD 77
G EP QE A G + G S PG+ EEE SP R F ++A +A
Sbjct: 1999 GTEPFQEEIVAAG------AMGSSHGGPGDSSEEESSPTSRYIHFPVTVVSAPGLAPSAT 2052
Query: 78 P 78
P
Sbjct: 2053 P 2053
>gi|10863889 squamous cell carcinoma antigen recognized by T cells
1 [Homo sapiens]
Length = 800
Score = 30.0 bits (66), Expect = 2.5
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 13 GRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRE 59
G GG G E R++RSR RG ER GR G E E S GRE
Sbjct: 44 GSGGSGGE-RRKRSRERGG---ERGSGRR----GAEAEARSSTHGRE 82
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 30.0 bits (66), Expect = 2.5
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 6 AAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEE-GSPGGREDGFTA 64
++A + G G+E +E G E E EE EEE GS +A
Sbjct: 266 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSA 325
Query: 65 EHLAAEAMAADMD----------PWLVFDARTTPATELDAWLAK-YPPSQVTRYGD--PG 111
E ++ E M+ D + P FD + + E + + + P S GD P
Sbjct: 326 EEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPD 385
Query: 112 SPNSEPV 118
SP P+
Sbjct: 386 SPALSPI 392
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 30.0 bits (66), Expect = 2.5
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 6 AAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEE-GSPGGREDGFTA 64
++A + G G+E +E G E E EE EEE GS +A
Sbjct: 275 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSA 334
Query: 65 EHLAAEAMAADMD----------PWLVFDARTTPATELDAWLAK-YPPSQVTRYGD--PG 111
E ++ E M+ D + P FD + + E + + + P S GD P
Sbjct: 335 EEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPD 394
Query: 112 SPNSEPV 118
SP P+
Sbjct: 395 SPALSPI 401
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,914,759
Number of Sequences: 37866
Number of extensions: 651506
Number of successful extensions: 3034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 2826
Number of HSP's gapped (non-prelim): 207
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.