LASS4 12116

Name: LASS4	Sequence: fasta or formatted (394aa)		NCBI GI: 205360977
Description: LAG1 homolog, ceramide synthase 4		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 23 4 C cysteine 1.5 6 1 D aspartate 4.1 16 1 E glutamate 4.8 19 2 F phenylalanine 7.1 28 2 G glycine 4.6 18 2 H histidine 2.3 9 2 I isoleucine 2.5 10 1 K lysine 3.6 14 2 L leucine 15.7 62 3 M methionine 2.5 10 1 N asparagine 2.8 11 1 P proline 5.3 21 2 Q glutamine 5.3 21 2 R arginine 7.6 30 4 S serine 6.6 26 2 T threonine 4.8 19 2 V valine 5.1 20 1 W tryptophan 3.3 13 2 Y tyrosine 4.6 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LAG1 homolog, ceramide synthase 4 LASS2 0.454 LAG1 longevity assurance 2 LASS2 0.454 LAG1 longevity assurance 2 LASS3 0.405 LAG1 longevity assurance homolog 3 LASS5 0.382 LAG1 homolog, ceramide synthase 5 LASS6 0.372 longevity assurance homolog 6 LASS1 0.107 LAG1 homolog, ceramide synthase 1 isoform 1 LASS1 0.105 LAG1 homolog, ceramide synthase 1 isoform 2 TRAM2 0.047 translocation-associated membrane protein 2 TRAM1 0.039 translocation associated membrane protein 1 TRAM1L1 0.038 translocation associated membrane protein 1-like 1 ... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform c ... HOPX 0.013 HOP homeobox isoform a HOPX 0.013 HOP homeobox isoform b HOPX 0.013 HOP homeobox isoform b HOPX 0.013 HOP homeobox isoform b SIX2 0.009 SIX homeobox 2 C16orf59 0.009 hypothetical protein LOC80178 SIX3 0.009 sine oculis homeobox homolog 3 PBX1 0.009 pre-B-cell leukemia homeobox 1 PBX2 0.009 pre-B-cell leukemia homeobox 2 KCNU1 0.009 potassium channel, subfamily U, member 1 SIX1 0.008 SIX homeobox 1 SIX5 0.008 sine oculis homeobox homolog 5 MEN1 0.006 menin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.