HOPX 12775

Name: HOPX	Sequence: fasta or formatted (73aa)		NCBI GI: 21264587
Description: HOP homeobox isoform b		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt mRNA [73aa] HOP homeobox isoform b alt prot [91aa] HOP homeobox isoform a alt mRNA [73aa] HOP homeobox isoform b alt prot [112aa] HOP homeobox isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 6 2 C cysteine 2.7 2 1 D aspartate 5.5 4 1 E glutamate 13.7 10 3 F phenylalanine 2.7 2 1 G glycine 4.1 3 1 H histidine 1.4 1 1 I isoleucine 2.7 2 1 K lysine 6.8 5 1 L leucine 8.2 6 1 M methionine 1.4 1 1 N asparagine 2.7 2 1 P proline 4.1 3 1 Q glutamine 4.1 3 1 R arginine 5.5 4 2 S serine 9.6 7 1 T threonine 8.2 6 2 V valine 4.1 3 1 W tryptophan 2.7 2 1 Y tyrosine 1.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HOP homeobox isoform b HOPX 1.000 HOP homeobox isoform a HOPX 1.000 HOP homeobox isoform b HOPX 1.000 HOP homeobox isoform b HOPX 0.583 HOP homeobox isoform c GSC 0.173 goosecoid PAX6 0.157 paired box gene 6 isoform a PAX6 0.157 paired box gene 6 isoform b PAX6 0.157 paired box gene 6 isoform a PITX3 0.134 paired-like homeodomain 3 PITX2 0.134 paired-like homeodomain transcription factor 2 isofo... PITX2 0.134 paired-like homeodomain transcription factor 2 isofo... PITX2 0.134 paired-like homeodomain transcription factor 2 isofo... PAX4 0.126 paired box 4 ESX1 0.118 extraembryonic, spermatogenesis, homeobox 1-like [Ho... GSC2 0.118 goosecoid homeobox 2 VSX2 0.110 visual system homeobox 2 PITX1 0.110 paired-like homeodomain transcription factor 1 [Hom... PAX3 0.110 paired box 3 isoform PAX3i PAX3 0.110 paired box 3 isoform PAX3g PAX3 0.110 paired box 3 isoform PAX3h PAX3 0.110 paired box 3 isoform PAX3e PAX3 0.110 paired box 3 isoform PAX3d PAX3 0.110 paired box 3 isoform PAX3 VSX1 0.102 visual system homeobox 1 isoform a ARX 0.102 aristaless related homeobox DRGX 0.102 dorsal root ganglia homeobox PAX7 0.094 paired box 7 isoform 1 PAX7 0.094 paired box 7 isoform 2 PAX7 0.094 paired box 7 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.