HOPX 14839

Name: HOPX	Sequence: fasta or formatted (91aa)		NCBI GI: 224282187
Description: HOP homeobox isoform a		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [73aa] HOP homeobox isoform b alt prot [73aa] HOP homeobox isoform b alt prot [73aa] HOP homeobox isoform b alt prot [112aa] HOP homeobox isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 7 2 C cysteine 3.3 3 1 D aspartate 4.4 4 1 E glutamate 13.2 12 3 F phenylalanine 3.3 3 1 G glycine 5.5 5 1 H histidine 1.1 1 1 I isoleucine 3.3 3 1 K lysine 5.5 5 1 L leucine 9.9 9 1 M methionine 2.2 2 1 N asparagine 2.2 2 1 P proline 3.3 3 1 Q glutamine 3.3 3 1 R arginine 8.8 8 3 S serine 7.7 7 1 T threonine 7.7 7 2 V valine 3.3 3 1 W tryptophan 2.2 2 1 Y tyrosine 2.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HOP homeobox isoform a HOPX 0.779 HOP homeobox isoform b HOPX 0.779 HOP homeobox isoform b HOPX 0.779 HOP homeobox isoform b HOPX 0.669 HOP homeobox isoform c GSC 0.135 goosecoid PAX6 0.123 paired box gene 6 isoform a PAX6 0.123 paired box gene 6 isoform b PAX6 0.123 paired box gene 6 isoform a PITX3 0.104 paired-like homeodomain 3 PITX2 0.104 paired-like homeodomain transcription factor 2 isofo... PITX2 0.104 paired-like homeodomain transcription factor 2 isofo... PITX2 0.104 paired-like homeodomain transcription factor 2 isofo... PAX4 0.098 paired box 4 ESX1 0.092 extraembryonic, spermatogenesis, homeobox 1-like [Ho... GSC2 0.092 goosecoid homeobox 2 VSX2 0.086 visual system homeobox 2 PITX1 0.086 paired-like homeodomain transcription factor 1 [Hom... PAX3 0.086 paired box 3 isoform PAX3i PAX3 0.086 paired box 3 isoform PAX3g PAX3 0.086 paired box 3 isoform PAX3h PAX3 0.086 paired box 3 isoform PAX3e PAX3 0.086 paired box 3 isoform PAX3d PAX3 0.086 paired box 3 isoform PAX3 UNCX 0.086 UNC homeobox VSX1 0.080 visual system homeobox 1 isoform a ARX 0.080 aristaless related homeobox DRGX 0.080 dorsal root ganglia homeobox PAX7 0.074 paired box 7 isoform 1 PAX7 0.074 paired box 7 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.