Guide to the Human Genome
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Name: TRAM1L1 Sequence: fasta or formatted (369aa) NCBI GI: 145580602
Description:

translocation associated membrane protein 1-like 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         23           2
 C cysteine            1.9          7           1
 D aspartate           2.4          9           1
 E glutamate           4.1         15           2
 F phenylalanine       7.0         26           2
 G glycine             5.1         19           1
 H histidine           3.0         11           1
 I isoleucine          6.5         24           3
 K lysine              7.0         26           3
 L leucine            11.9         44           4
 M methionine          2.4          9           2
 N asparagine          4.1         15           1
 P proline             2.7         10           2
 Q glutamine           4.9         18           1
 R arginine            3.3         12           1
 S serine              8.1         30           3
 T threonine           5.4         20           1
 V valine              7.6         28           1
 W tryptophan          1.9          7           1
 Y tyrosine            4.3         16           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocation associated membrane protein 1-like 1 ... 
TRAM1                 0.715   translocation associated membrane protein 1 
TRAM2                 0.409   translocation-associated membrane protein 2 
LASS4                 0.042   LAG1 homolog, ceramide synthase 4 
LASS2                 0.028   LAG1 longevity assurance 2 
LASS2                 0.028   LAG1 longevity assurance 2 
LASS5                 0.018   LAG1 homolog, ceramide synthase 5 
LASS3                 0.015   LAG1 longevity assurance homolog 3 
LASS1                 0.008   LAG1 homolog, ceramide synthase 1 isoform 2 
LASS1                 0.008   LAG1 homolog, ceramide synthase 1 isoform 1 
SLC6A14               0.008   solute carrier family 6 (amino acid transporter), mem...
GJC3                  0.008   gap junction protein, gamma 3, 30.2kDa 
ITIH3                 0.007   inter-alpha (globulin) inhibitor H3 preproprotein [...
METTL1                0.006   methyltransferase-like protein 1 isoform a 
TMBIM1                0.006   transmembrane BAX inhibitor motif containing 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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