Search of human proteins with 205277369

Search of human proteins with 205277369

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|205277369 microfibrillar-associated protein 3 isoform 2
[Homo sapiens]
         (216 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|205277369 microfibrillar-associated protein 3 isoform 2 [Homo...   429   e-121
gi|5174555 microfibrillar-associated protein 3 isoform 1 [Homo s...   429   e-121
gi|57222338 microfibrillar-associated protein 3-like isoform 2 [...   239   1e-63
gi|153792329 microfibrillar-associated protein 3-like isoform 1 ...   239   1e-63
gi|57222563 colonic and hepatic tumor over-expressed protein iso...    39   0.004
gi|57164942 colonic and hepatic tumor over-expressed protein iso...    39   0.004
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]         32   0.41 
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]         32   0.41 
gi|27501450 axin 1 isoform a [Homo sapiens]                            30   1.6  
gi|31083144 axin 1 isoform b [Homo sapiens]                            30   1.6  
gi|222537747 hypothetical protein LOC342979 [Homo sapiens]             30   2.0  
gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10 iso...    30   2.0  
gi|48976061 acyl-Coenzyme A dehydrogenase family, member 10 isof...    30   2.0  
gi|211971012 acyl-Coenzyme A dehydrogenase family, member 10 iso...    30   2.0  
gi|71999143 opsin 4 isoform 2 [Homo sapiens]                           29   2.7  
gi|15150803 opsin 4 isoform 1 [Homo sapiens]                           29   2.7  
gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]     29   3.5  
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]     29   3.5  
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]       29   3.5  
gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]      29   3.5  
gi|119829187 alpha 1 type XVII collagen [Homo sapiens]                 28   4.5  
gi|33563376 TBC1 domain family, member 16 [Homo sapiens]               28   4.5  
gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo ...    28   7.8  
gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo ...    28   7.8  
gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo ...    28   7.8  
gi|29126245 taste receptor, type 2, member 45 [Homo sapiens]           28   7.8  

>gi|205277369 microfibrillar-associated protein 3 isoform 2 [Homo
           sapiens]
          Length = 216

 Score =  429 bits (1103), Expect = e-121
 Identities = 216/216 (100%), Positives = 216/216 (100%)

Query: 1   MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 60
           MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI
Sbjct: 1   MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 60

Query: 61  PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD 120
           PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD
Sbjct: 61  PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD 120

Query: 121 LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS 180
           LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS
Sbjct: 121 LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS 180

Query: 181 IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL 216
           IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL
Sbjct: 181 IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL 216


>gi|5174555 microfibrillar-associated protein 3 isoform 1 [Homo
           sapiens]
          Length = 362

 Score =  429 bits (1103), Expect = e-121
 Identities = 216/216 (100%), Positives = 216/216 (100%)

Query: 1   MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 60
           MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI
Sbjct: 147 MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 206

Query: 61  PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD 120
           PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD
Sbjct: 207 PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDPDD 266

Query: 121 LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS 180
           LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS
Sbjct: 267 LGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKS 326

Query: 181 IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL 216
           IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL
Sbjct: 327 IDTESQGSSHFSPPDDIGSAESNCNYKDGAYENCQL 362


>gi|57222338 microfibrillar-associated protein 3-like isoform 2
           [Homo sapiens]
          Length = 306

 Score =  239 bits (610), Expect = 1e-63
 Identities = 123/188 (65%), Positives = 147/188 (78%), Gaps = 1/188 (0%)

Query: 1   MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 60
           M VYYM+VCL+AFTI ++LN+TRLCMMSSHL+KTEKAINEFFRTEGAEKLQKAFEIAKRI
Sbjct: 46  MGVYYMVVCLVAFTIVMVLNITRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRI 105

Query: 61  PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDP-D 119
           PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLI+NCR  +EE+ E V +++   
Sbjct: 106 PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEEIMEVVGLEEQGQ 165

Query: 120 DLGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETK 179
           +      E      +  +Y I   + RS+SP  DSD  SL+EQ Q+IA++VSVH QS+ +
Sbjct: 166 NFVRHTPEGQEAADRDEVYTIPNSLKRSDSPAADSDASSLHEQPQQIAIKVSVHPQSKKE 225

Query: 180 SIDTESQG 187
             D +  G
Sbjct: 226 HADDQEGG 233


>gi|153792329 microfibrillar-associated protein 3-like isoform 1
           [Homo sapiens]
          Length = 409

 Score =  239 bits (610), Expect = 1e-63
 Identities = 123/188 (65%), Positives = 147/188 (78%), Gaps = 1/188 (0%)

Query: 1   MSVYYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRI 60
           M VYYM+VCL+AFTI ++LN+TRLCMMSSHL+KTEKAINEFFRTEGAEKLQKAFEIAKRI
Sbjct: 149 MGVYYMVVCLVAFTIVMVLNITRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRI 208

Query: 61  PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDP-D 119
           PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLI+NCR  +EE+ E V +++   
Sbjct: 209 PIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEEIMEVVGLEEQGQ 268

Query: 120 DLGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETK 179
           +      E      +  +Y I   + RS+SP  DSD  SL+EQ Q+IA++VSVH QS+ +
Sbjct: 269 NFVRHTPEGQEAADRDEVYTIPNSLKRSDSPAADSDASSLHEQPQQIAIKVSVHPQSKKE 328

Query: 180 SIDTESQG 187
             D +  G
Sbjct: 329 HADDQEGG 336


>gi|57222563 colonic and hepatic tumor over-expressed protein
           isoform b [Homo sapiens]
          Length = 1972

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 30/174 (17%)

Query: 35  EKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVP 94
           EKA+N F       KL K  E ++++ +I   K    A   +FK               P
Sbjct: 472 EKAVNPFLADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFK---------------P 516

Query: 95  LPPLILNCRAFVEEMFEAVRVDDPDDLGERIKERPALNAQGGIYVINPEMGRSNSPGGDS 154
           LP       A  ++  + +    P  L    K+ PA  A G      P+ G+  +PGG  
Sbjct: 517 LPGRTAASGAAGDKDTKDISAPKPGPL----KKAPAAKAGG-----PPKKGKPAAPGGAG 567

Query: 155 DDGSLNEQGQEIAVQVSVHLQSETKSIDTESQGSSHFSPPDDIGSAESNCNYKD 208
           + G+ N++G E    V   L     SI+   + +S   PP  I   +S+ N+K+
Sbjct: 568 NTGTKNKKGLETKEIVEPEL-----SIEVCEEKASAVLPPTCIQLLDSS-NWKE 615


>gi|57164942 colonic and hepatic tumor over-expressed protein
           isoform a [Homo sapiens]
          Length = 2032

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 30/174 (17%)

Query: 35  EKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVP 94
           EKA+N F       KL K  E ++++ +I   K    A   +FK               P
Sbjct: 472 EKAVNPFLADVDKLKLDKIKECSEKVELIHGKKAGLAADKKEFK---------------P 516

Query: 95  LPPLILNCRAFVEEMFEAVRVDDPDDLGERIKERPALNAQGGIYVINPEMGRSNSPGGDS 154
           LP       A  ++  + +    P  L    K+ PA  A G      P+ G+  +PGG  
Sbjct: 517 LPGRTAASGAAGDKDTKDISAPKPGPL----KKAPAAKAGG-----PPKKGKPAAPGGAG 567

Query: 155 DDGSLNEQGQEIAVQVSVHLQSETKSIDTESQGSSHFSPPDDIGSAESNCNYKD 208
           + G+ N++G E    V   L     SI+   + +S   PP  I   +S+ N+K+
Sbjct: 568 NTGTKNKKGLETKEIVEPEL-----SIEVCEEKASAVLPPTCIQLLDSS-NWKE 615


>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
          Length = 1251

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 117 DPDDLGERIKERPALNAQGGIYVINPEMGRSNSPG--GDSDDGSLNEQGQEIAVQVSVHL 174
           D ++  ++  +R AL A     V+     R++ P   G S   S          + S   
Sbjct: 400 DEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGS 459

Query: 175 QSETKSIDTESQGSS--HFSPPD 195
            SET+S  +ES+GS   HFS P+
Sbjct: 460 DSETESSSSESEGSKPPHFSSPE 482


>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
          Length = 1226

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 117 DPDDLGERIKERPALNAQGGIYVINPEMGRSNSPG--GDSDDGSLNEQGQEIAVQVSVHL 174
           D ++  ++  +R AL A     V+     R++ P   G S   S          + S   
Sbjct: 375 DEEENEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGS 434

Query: 175 QSETKSIDTESQGSS--HFSPPD 195
            SET+S  +ES+GS   HFS P+
Sbjct: 435 DSETESSSSESEGSKPPHFSSPE 457


>gi|27501450 axin 1 isoform a [Homo sapiens]
          Length = 862

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 43  RTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNC 102
           R +   ++Q++ ++  R+P+    +T  + K  + +  +FA   EEL   +         
Sbjct: 349 RKQHRREMQESVQVNGRVPLPHIPRTYRVPKEVRVEPQKFA---EELIHRLEAVQRTREA 405

Query: 103 RAFVEEMFEAVRVDDPDDLGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDG--SLN 160
              +EE  + VR+++  + G+     P+    G  + + P     + P    D G   L 
Sbjct: 406 EEKLEERLKRVRMEEEGEDGD-----PSSGPPGPCHKLPPAPAWHHFPPRCVDMGCAGLR 460

Query: 161 EQGQEIAVQV-SVHLQSETKSIDTESQGSSHFSP 193
           +  +E    +   H+Q   ++   +S G  H SP
Sbjct: 461 DAHEENPESILDEHVQRVLRTPGRQSPGPGHRSP 494


>gi|31083144 axin 1 isoform b [Homo sapiens]
          Length = 826

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 43  RTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLILNC 102
           R +   ++Q++ ++  R+P+    +T  + K  + +  +FA   EEL   +         
Sbjct: 349 RKQHRREMQESVQVNGRVPLPHIPRTYRVPKEVRVEPQKFA---EELIHRLEAVQRTREA 405

Query: 103 RAFVEEMFEAVRVDDPDDLGERIKERPALNAQGGIYVINPEMGRSNSPGGDSDDG--SLN 160
              +EE  + VR+++  + G+     P+    G  + + P     + P    D G   L 
Sbjct: 406 EEKLEERLKRVRMEEEGEDGD-----PSSGPPGPCHKLPPAPAWHHFPPRCVDMGCAGLR 460

Query: 161 EQGQEIAVQV-SVHLQSETKSIDTESQGSSHFSP 193
           +  +E    +   H+Q   ++   +S G  H SP
Sbjct: 461 DAHEENPESILDEHVQRVLRTPGRQSPGPGHRSP 494


>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
          Length = 673

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 18/93 (19%)

Query: 90  ARSVPLPPLILNCRAFVEEMFEAVRVDDPDDLGE-------------RIKERPALNAQGG 136
           A S+ LP  +   R  VE ++E V   D + +GE             R++ER    A   
Sbjct: 258 AGSLELPAWVKEDRGIVEVVWEGVGGSDAEAMGEIGRVPEVVQTSSPRLQERLEAAAS-- 315

Query: 137 IYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQ 169
              I  E     SP GD   GS  E+G  I V+
Sbjct: 316 ---IEGEDVPQGSPEGDGQGGSGGEEGSFIWVE 345


>gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10
           isoform a [Homo sapiens]
          Length = 1090

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 35/138 (25%)

Query: 23  RLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEF 82
           RLC   S + KT   ++ FF    +E+      +AK+ P++T A T   AK  Q   +  
Sbjct: 107 RLC---SEMLKTSVPVDSFFSLLTSER------VAKQFPVMTEAITQIRAKGLQTAVLSN 157

Query: 83  ARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDP--------------------DDLG 122
             Y+      +PL     +    VE   E +   DP                    DDLG
Sbjct: 158 NFYLPNQKSFLPLDRKQFD--VIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLG 215

Query: 123 ERIKERPALNAQGGIYVI 140
             +KE   L    GI+ I
Sbjct: 216 TNLKEAARL----GIHTI 229


>gi|48976061 acyl-Coenzyme A dehydrogenase family, member 10 isoform
           b [Homo sapiens]
          Length = 1059

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 35/138 (25%)

Query: 23  RLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEF 82
           RLC   S + KT   ++ FF    +E+      +AK+ P++T A T   AK  Q   +  
Sbjct: 107 RLC---SEMLKTSVPVDSFFSLLTSER------VAKQFPVMTEAITQIRAKGLQTAVLSN 157

Query: 83  ARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDP--------------------DDLG 122
             Y+      +PL     +    VE   E +   DP                    DDLG
Sbjct: 158 NFYLPNQKSFLPLDRKQFD--VIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLG 215

Query: 123 ERIKERPALNAQGGIYVI 140
             +KE   L    GI+ I
Sbjct: 216 TNLKEAARL----GIHTI 229


>gi|211971012 acyl-Coenzyme A dehydrogenase family, member 10
           isoform c [Homo sapiens]
          Length = 890

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 35/138 (25%)

Query: 23  RLCMMSSHLRKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEF 82
           RLC   S + KT   ++ FF    +E+      +AK+ P++T A T   AK  Q   +  
Sbjct: 107 RLC---SEMLKTSVPVDSFFSLLTSER------VAKQFPVMTEAITQIRAKGLQTAVLSN 157

Query: 83  ARYIEELARSVPLPPLILNCRAFVEEMFEAVRVDDP--------------------DDLG 122
             Y+      +PL     +    VE   E +   DP                    DDLG
Sbjct: 158 NFYLPNQKSFLPLDRKQFD--VIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLG 215

Query: 123 ERIKERPALNAQGGIYVI 140
             +KE   L    GI+ I
Sbjct: 216 TNLKEAARL----GIHTI 229


>gi|71999143 opsin 4 isoform 2 [Homo sapiens]
          Length = 489

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 4   YYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEG-------AEKLQKAFEI 56
           Y M++C   F + L++ +     +   +R+T +A+  F   +G        ++LQ   ++
Sbjct: 246 YTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKM 305

Query: 57  AKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIL 100
           AK + ++     L  A  +    + FA Y   L   +   P ++
Sbjct: 306 AKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVI 349


>gi|15150803 opsin 4 isoform 1 [Homo sapiens]
          Length = 478

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 4   YYMIVCLIAFTITLILNVTRLCMMSSHLRKTEKAINEFFRTEG-------AEKLQKAFEI 56
           Y M++C   F + L++ +     +   +R+T +A+  F   +G        ++LQ   ++
Sbjct: 235 YTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKM 294

Query: 57  AKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIL 100
           AK + ++     L  A  +    + FA Y   L   +   P ++
Sbjct: 295 AKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVI 338


>gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]
          Length = 1884

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 129  PALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQV-----SVHLQSETKSIDT 183
            P LNA   + V+ PE+ + + PG +     + +Q  E  VQ      S +L S+      
Sbjct: 1078 PKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQEYEEVVQTVNTDFSPYLISDNLE--- 1134

Query: 184  ESQGSSHFS-----PPDDI 197
            +  GSSH S      PDD+
Sbjct: 1135 QPMGSSHASQVCSETPDDL 1153


>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
          Length = 1816

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 129  PALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQV-----SVHLQSETKSIDT 183
            P LNA   + V+ PE+ + + PG +     + +Q  E  VQ      S +L S+      
Sbjct: 1031 PKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQEYEEVVQTVNTDFSPYLISDNLE--- 1087

Query: 184  ESQGSSHFS-----PPDDI 197
            +  GSSH S      PDD+
Sbjct: 1088 QPMGSSHASQVCSETPDDL 1106


>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
          Length = 1863

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 129  PALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQV-----SVHLQSETKSIDT 183
            P LNA   + V+ PE+ + + PG +     + +Q  E  VQ      S +L S+      
Sbjct: 1078 PKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQEYEEVVQTVNTDFSPYLISDNLE--- 1134

Query: 184  ESQGSSHFS-----PPDDI 197
            +  GSSH S      PDD+
Sbjct: 1135 QPMGSSHASQVCSETPDDL 1153


>gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]
          Length = 1150

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/23 (47%), Positives = 18/23 (78%)

Query: 159 LNEQGQEIAVQVSVHLQSETKSI 181
           L+E+GQ +AVQ+S H  S T+++
Sbjct: 676 LSEEGQPLAVQISAHWSSATEAV 698


>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
          Length = 1497

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 129  PALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSET 178
            P+  ++GG        G    PG     GS++  GQEI   +S ++QS++
Sbjct: 977  PSGPSEGGSSSTMYVSGPPGPPGPPGPPGSISSSGQEIQQYISEYMQSDS 1026


>gi|33563376 TBC1 domain family, member 16 [Homo sapiens]
          Length = 767

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 26/138 (18%)

Query: 89  LARSVPLPPLILNCRAFVEEMFEAVRVDDPDDLGERIKERPALNAQGGIYVINP----EM 144
           +A+SVP   L        E++ + + VD     G +   +PA +  G +  ++P    E 
Sbjct: 144 VAQSVPDRMLASPAPEDEEKLAQGLGVD-----GAQPASQPACSPSGILSTVSPQDVTEE 198

Query: 145 GRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKSID----------TESQGS----SH 190
           GR   P    +DGSL    + ++   S    S+T S             ES+GS    S 
Sbjct: 199 GREPRPEAGEEDGSLELSAEGVSRDSSFDSDSDTFSSPFCLSPISAALAESRGSVFLESD 258

Query: 191 FSPPDDIGSAESNCNYKD 208
            SPP    S+++   + D
Sbjct: 259 SSPP---SSSDAGLRFPD 273


>gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 127 ERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKSIDTESQ 186
           + PA   Q G     P      SP  DSD  S  E+ +E   +     ++ + +IDT   
Sbjct: 499 DEPAAGVQNGAPSPAP------SPDSDSDSDSDGEEEEE---EEGERDETPSGAIDTRDT 549

Query: 187 GSSHFSPPDD 196
           GSS   PP +
Sbjct: 550 GSSEPQPPPE 559


>gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 127 ERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKSIDTESQ 186
           + PA   Q G     P      SP  DSD  S  E+ +E   +     ++ + +IDT   
Sbjct: 499 DEPAAGVQNGAPSPAP------SPDSDSDSDSDGEEEEE---EEGERDETPSGAIDTRDT 549

Query: 187 GSSHFSPPDD 196
           GSS   PP +
Sbjct: 550 GSSEPQPPPE 559


>gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 127 ERPALNAQGGIYVINPEMGRSNSPGGDSDDGSLNEQGQEIAVQVSVHLQSETKSIDTESQ 186
           + PA   Q G     P      SP  DSD  S  E+ +E   +     ++ + +IDT   
Sbjct: 499 DEPAAGVQNGAPSPAP------SPDSDSDSDSDGEEEEE---EEGERDETPSGAIDTRDT 549

Query: 187 GSSHFSPPDD 196
           GSS   PP +
Sbjct: 550 GSSEPQPPPE 559


>gi|29126245 taste receptor, type 2, member 45 [Homo sapiens]
          Length = 299

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 6   MIVCLIAFTITLILNVTRLCMMSSHLRKTE 35
           M+  L+ FT+TLI  +  +C +  HL+K +
Sbjct: 181 MLANLVPFTVTLISFLLLVCSLCKHLKKMQ 210


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,763,939
Number of Sequences: 37866
Number of extensions: 315247
Number of successful extensions: 1083
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1071
Number of HSP's gapped (non-prelim): 29
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.