Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AXIN1 Sequence: fasta or formatted (862aa) NCBI GI: 27501450
Description:

axin 1 isoform a

Referenced in:

Wnt Signals

Other entries for this name:
alt prot [826aa] axin 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         67           2
 C cysteine            1.9         16           1
 D aspartate           5.1         44           2
 E glutamate           9.4         81           4
 F phenylalanine       2.6         22           1
 G glycine             7.9         68           3
 H histidine           3.7         32           3
 I isoleucine          3.0         26           2
 K lysine              5.6         48           2
 L leucine             6.7         58           3
 M methionine          1.5         13           1
 N asparagine          1.9         16           2
 P proline             8.4         72           2
 Q glutamine           4.1         35           2
 R arginine            8.0         69           3
 S serine              8.7         75           3
 T threonine           4.3         37           1
 V valine              5.9         51           2
 W tryptophan          0.9          8           1
 Y tyrosine            2.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   axin 1 isoform a 
AXIN1                 0.949   axin 1 isoform b 
AXIN2                 0.334   axin 2 
RGS3                  0.031   regulator of G-protein signalling 3 isoform 4 
RGS3                  0.031   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.031   regulator of G-protein signalling 3 isoform 5 
RGS3                  0.031   regulator of G-protein signalling 3 isoform 2 
RGS3                  0.031   regulator of G-protein signalling 3 isoform 1 
RGS10                 0.031   regulator of G-protein signaling 10 isoform b 
RGS10                 0.031   regulator of G-protein signaling 10 isoform a 
RGS5                  0.029   regulator of G-protein signalling 5 
RGS18                 0.028   regulator of G-protein signalling 18 
RGS1                  0.028   regulator of G-protein signalling 1 
RGS21                 0.028   regulator of G-protein signaling 21 
RGS8                  0.027   regulator of G-protein signalling 8 isoform 1 
RGS8                  0.027   regulator of G-protein signalling 8 isoform 2 [Homo...
RGS4                  0.025   regulator of G-protein signaling 4 isoform 3 
RGS4                  0.025   regulator of G-protein signaling 4 isoform 2 
RGS4                  0.025   regulator of G-protein signaling 4 isoform 1 
RGS2                  0.025   regulator of G-protein signaling 2, 24kDa 
RGS17                 0.022   regulator of G-protein signalling 17 
RGS14                 0.022   regulator of G-protein signalling 14 
RGS20                 0.022   regulator of G-protein signaling 20 isoform b 
RGS20                 0.022   regulator of G-protein signaling 20 isoform a 
RGS16                 0.022   regulator of G-protein signalling 16 
RGS19                 0.021   G protein signalling regulator 19 
RGS19                 0.021   G protein signalling regulator 19 
RGS13                 0.020   regulator of G-protein signalling 13 
RGS13                 0.020   regulator of G-protein signalling 13 
RGS12                 0.014   regulator of G-protein signalling 12 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press