BRCA1 16091

Name: BRCA1	Sequence: fasta or formatted (1816aa)		NCBI GI: 237681121
Description: breast cancer 1, early onset isoform 3		Referenced in: DNases, Recombination, and DNA Repair Mammary Tissues Ring Finger Proteins
Other entries for this name: alt prot [1884aa] breast cancer 1, early onset isoform 2 alt prot [759aa] breast cancer 1, early onset isoform 4 alt prot [699aa] breast cancer 1, early onset isoform 5 alt prot [1863aa] breast cancer 1, early onset isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 82 3 C cysteine 2.1 39 2 D aspartate 4.6 83 2 E glutamate 10.6 193 3 F phenylalanine 2.6 47 1 G glycine 4.8 87 2 H histidine 2.6 48 2 I isoleucine 4.0 72 2 K lysine 7.3 133 4 L leucine 8.3 151 3 M methionine 1.5 28 1 N asparagine 6.6 119 2 P proline 5.2 94 2 Q glutamine 5.2 95 2 R arginine 4.1 75 2 S serine 12.2 222 3 T threonine 6.1 110 2 V valine 5.3 97 3 W tryptophan 0.6 10 1 Y tyrosine 1.7 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 breast cancer 1, early onset isoform 3 BRCA1 1.000 breast cancer 1, early onset isoform 1 BRCA1 0.996 breast cancer 1, early onset isoform 2 BRCA1 0.273 breast cancer 1, early onset isoform 4 BRCA1 0.223 breast cancer 1, early onset isoform 5 DSPP 0.013 dentin sialophosphoprotein preproprotein BARD1 0.008 BRCA1 associated RING domain 1 ATRX 0.006 transcriptional regulator ATRX isoform 2 ATRX 0.006 transcriptional regulator ATRX isoform 1 EEA1 0.006 early endosome antigen 1, 162kD MCPH1 0.006 microcephalin LMTK2 0.006 lemur tyrosine kinase 2 SYCP2 0.006 synaptonemal complex protein 2 GCC2 0.006 GRIP and coiled-coil domain-containing 2 MAP9 0.005 aster-associated protein CMYA5 0.005 cardiomyopathy associated 5 CCDC144A 0.005 coiled-coil domain containing 144A IWS1 0.005 IWS1 homolog PACS2 0.005 phosphofurin acidic cluster sorting protein 2 isofo... EPS15 0.005 epidermal growth factor receptor pathway substrate 15... CEP110 0.005 centrosomal protein 110kDa KIF20B 0.005 M-phase phosphoprotein 1 CCDC110 0.005 coiled-coil domain containing 110 isoform a PCLO 0.004 piccolo isoform 2 PCLO 0.004 piccolo isoform 1 KTN1 0.004 kinectin 1 isoform a KTN1 0.004 kinectin 1 isoform c KTN1 0.004 kinectin 1 isoform a EPS15 0.004 epidermal growth factor receptor pathway substrate ... TP53BP1 0.004 tumor protein p53 binding protein 1 isoform 1 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.