Guide to the Human Genome
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Name: MFAP3 Sequence: fasta or formatted (216aa) NCBI GI: 205277369
Description:

microfibrillar-associated protein 3 isoform 2

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [362aa] microfibrillar-associated protein 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         16           1
 C cysteine            2.3          5           1
 D aspartate           5.1         11           2
 E glutamate           9.7         21           2
 F phenylalanine       4.2          9           2
 G glycine             5.6         12           2
 H histidine           1.4          3           1
 I isoleucine          7.9         17           2
 K lysine              5.1         11           1
 L leucine             7.9         17           1
 M methionine          3.2          7           2
 N asparagine          4.6         10           1
 P proline             4.6         10           2
 Q glutamine           4.2          9           1
 R arginine            5.1         11           1
 S serine              8.3         18           2
 T threonine           5.1         11           1
 V valine              5.6         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.8          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microfibrillar-associated protein 3 isoform 2 [Homo... 
MFAP3                 1.000   microfibrillar-associated protein 3 isoform 1 
MFAP3L                0.530   microfibrillar-associated protein 3-like isoform 2 [...
MFAP3L                0.530   microfibrillar-associated protein 3-like isoform 1 ...
CKAP5                 0.035   colonic and hepatic tumor over-expressed protein iso...
CKAP5                 0.035   colonic and hepatic tumor over-expressed protein iso...
AFF3                  0.017   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.017   AF4/FMR2 family, member 3 isoform 1 
AXIN1                 0.012   axin 1 isoform a 
AXIN1                 0.012   axin 1 isoform b 
PALM3                 0.012   hypothetical protein LOC342979 
ACAD10                0.012   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.012   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD10                0.012   acyl-Coenzyme A dehydrogenase family, member 10 iso...
OPN4                  0.010   opsin 4 isoform 2 
OPN4                  0.010   opsin 4 isoform 1 
BRCA1                 0.010   breast cancer 1, early onset isoform 2 
BRCA1                 0.010   breast cancer 1, early onset isoform 3 
BRCA1                 0.010   breast cancer 1, early onset isoform 1 
MAN2A2                0.010   mannosidase, alpha, class 2A, member 2 
COL17A1               0.007   alpha 1 type XVII collagen 
TBC1D16               0.007   TBC1 domain family, member 16 
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
TAS2R45               0.007   taste receptor, type 2, member 45 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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