Guide to the Human Genome
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Name: MFAP3L Sequence: fasta or formatted (306aa) NCBI GI: 57222338
Description:

microfibrillar-associated protein 3-like isoform 2

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [409aa] microfibrillar-associated protein 3-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         22           2
 C cysteine            1.6          5           1
 D aspartate           4.6         14           2
 E glutamate          11.1         34           2
 F phenylalanine       3.3         10           2
 G glycine             3.6         11           2
 H histidine           2.9          9           1
 I isoleucine          6.2         19           2
 K lysine              5.9         18           2
 L leucine             6.5         20           2
 M methionine          3.3         10           2
 N asparagine          3.3         10           2
 P proline             5.6         17           2
 Q glutamine           3.6         11           2
 R arginine            3.6         11           1
 S serine              7.5         23           2
 T threonine           8.8         27           1
 V valine              8.8         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microfibrillar-associated protein 3-like isoform 2 [... 
MFAP3L                1.000   microfibrillar-associated protein 3-like isoform 1 ...
MFAP3                 0.438   microfibrillar-associated protein 3 isoform 1 
MFAP3                 0.369   microfibrillar-associated protein 3 isoform 2 [Homo...
FGFR2                 0.033   fibroblast growth factor receptor 2 isoform 4 precu...
FGFR1                 0.028   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.028   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.028   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.028   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.028   fibroblast growth factor receptor 1 isoform 1 precu...
IGSF10                0.026   immunoglobulin superfamily, member 10 
FGFR2                 0.026   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.026   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR2                 0.026   fibroblast growth factor receptor 2 isoform 1 precu...
HMCN1                 0.026   hemicentin 1 
FGFR2                 0.026   fibroblast growth factor receptor 2 isoform 8 precu...
MXRA5                 0.024   adlican 
CNTN6                 0.024   contactin 6 
MAP2                  0.022   microtubule-associated protein 2 isoform 1 
MYST4                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
CNTN4                 0.022   contactin 4 isoform c precursor 
CNTN4                 0.022   contactin 4 isoform a precursor 
NFASC                 0.021   neurofascin isoform 3 precursor 
NFASC                 0.021   neurofascin isoform 2 precursor 
NFASC                 0.021   neurofascin isoform 4 precursor 
TTN                   0.021   titin isoform novex-2 
TTN                   0.021   titin isoform novex-1 
TTN                   0.021   titin isoform N2-B 
NFASC                 0.021   neurofascin isoform 6 precursor 
NFASC                 0.021   neurofascin isoform 5 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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