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Search of human proteins with 113426339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210350 PREDICTED: hypothetical protein [Homo sapiens] 342 9e-95
gi|113426339 PREDICTED: hypothetical protein [Homo sapiens] 342 9e-95
gi|113426005 PREDICTED: hypothetical protein [Homo sapiens] 342 9e-95
gi|169210203 PREDICTED: hypothetical protein [Homo sapiens] 139 1e-33
gi|169209840 PREDICTED: hypothetical protein [Homo sapiens] 139 1e-33
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 47 1e-05
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 47 1e-05
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 47 1e-05
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 47 1e-05
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 44 6e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 43 1e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 43 1e-04
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 43 1e-04
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 42 2e-04
gi|116268091 PHD finger protein 23 [Homo sapiens] 41 5e-04
gi|24233572 zinc finger protein 367 [Homo sapiens] 39 0.002
gi|23510333 pygopus homolog 2 [Homo sapiens] 39 0.002
gi|39812378 RAN binding protein 9 [Homo sapiens] 39 0.002
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 39 0.003
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 39 0.003
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 39 0.003
gi|88900495 HCF-binding transcription factor Zhangfei [Homo sapi... 38 0.005
gi|157743252 pecanex-like 3 [Homo sapiens] 38 0.005
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 38 0.005
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 37 0.008
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 37 0.008
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 37 0.008
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 37 0.008
>gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 342 bits (877), Expect = 9e-95
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE
Sbjct: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
Query: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG
Sbjct: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
Query: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA
Sbjct: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
>gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 342 bits (877), Expect = 9e-95
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE
Sbjct: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
Query: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG
Sbjct: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
Query: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA
Sbjct: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
>gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 342 bits (877), Expect = 9e-95
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE
Sbjct: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
Query: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG
Sbjct: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEG 120
Query: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA
Sbjct: 121 RGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLGGEEVWA 165
>gi|169210203 PREDICTED: hypothetical protein [Homo sapiens]
Length = 99
Score = 139 bits (350), Expect = 1e-33
Identities = 68/75 (90%), Positives = 68/75 (90%)
Query: 48 RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR 107
RRRERRGEREADEG TS PGPCAAH AGAPEDEDDEEQAVAAAPHAH ATASPPPGSAR
Sbjct: 2 RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
Query: 108 RAAAVARHAGSEGRG 122
RAA VARHAGSE RG
Sbjct: 62 RAATVARHAGSERRG 76
>gi|169209840 PREDICTED: hypothetical protein [Homo sapiens]
Length = 99
Score = 139 bits (350), Expect = 1e-33
Identities = 68/75 (90%), Positives = 68/75 (90%)
Query: 48 RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR 107
RRRERRGEREADEG TS PGPCAAH AGAPEDEDDEEQAVAAAPHAH ATASPPPGSAR
Sbjct: 2 RRRERRGEREADEGAPTSLPGPCAAHDAGAPEDEDDEEQAVAAAPHAHKATASPPPGSAR 61
Query: 108 RAAAVARHAGSEGRG 122
RAA VARHAGSE RG
Sbjct: 62 RAATVARHAGSERRG 76
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 1e-05
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
+ K R + R+ P P A P + + + + R +R R +RR ERE E
Sbjct: 483 LLKSLRSRLRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKE 542
Query: 61 GEATSFPGPCAAHVAGAPEDEDD----EEQAVAAAPHAHTATASPPPGSARRAAAVARHA 116
A + GP +AG ++D E A P A T+ P P A
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 117 GSEGRGWRPPG-LGREAGPVGGAEPREAGSIAGR-PAPHVPRP 157
S PPG + + GP +P+ AGS +G P P P P
Sbjct: 603 TSP-----PPGPVAQPTGP----QPQSAGSTSGPVPQPACPPP 636
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 1e-05
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
+ K R + R+ P P A P + + + + R +R R +RR ERE E
Sbjct: 483 LLKSLRSRLRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKE 542
Query: 61 GEATSFPGPCAAHVAGAPEDEDD----EEQAVAAAPHAHTATASPPPGSARRAAAVARHA 116
A + GP +AG ++D E A P A T+ P P A
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 117 GSEGRGWRPPG-LGREAGPVGGAEPREAGSIAGR-PAPHVPRP 157
S PPG + + GP +P+ AGS +G P P P P
Sbjct: 603 TSP-----PPGPVAQPTGP----QPQSAGSTSGPVPQPACPPP 636
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 1e-05
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
+ K R + R+ P P A P + + + + R +R R +RR ERE E
Sbjct: 483 LLKSLRSRLRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKE 542
Query: 61 GEATSFPGPCAAHVAGAPEDEDD----EEQAVAAAPHAHTATASPPPGSARRAAAVARHA 116
A + GP +AG ++D E A P A T+ P P A
Sbjct: 543 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 602
Query: 117 GSEGRGWRPPG-LGREAGPVGGAEPREAGSIAGR-PAPHVPRP 157
S PPG + + GP +P+ AGS +G P P P P
Sbjct: 603 TSP-----PPGPVAQPTGP----QPQSAGSTSGPVPQPACPPP 636
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 46.6 bits (109), Expect = 1e-05
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADE 60
+ K R + R+ P P A P + + + + R +R R +RR ERE E
Sbjct: 344 LLKSLRSRLRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKE 403
Query: 61 GEATSFPGPCAAHVAGAPEDEDD----EEQAVAAAPHAHTATASPPPGSARRAAAVARHA 116
A + GP +AG ++D E A P A T+ P P A
Sbjct: 404 RGAGASGGPSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQP 463
Query: 117 GSEGRGWRPPG-LGREAGPVGGAEPREAGSIAGR-PAPHVPRP 157
S PPG + + GP +P+ AGS +G P P P P
Sbjct: 464 TSP-----PPGPVAQPTGP----QPQSAGSTSGPVPQPACPPP 497
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 43.9 bits (102), Expect = 6e-05
Identities = 34/114 (29%), Positives = 41/114 (35%)
Query: 13 PPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFPGPCAA 72
PP PAA R A + R + R RE R ++ +S GP A
Sbjct: 180 PPSPAARQPEPPPMPRAARSARAATAARAAAAEREEAREERARGCSEASRTSSDSGPSRA 239
Query: 73 HVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRGWRPP 126
A E A A P A A SP P + AAA + G G RPP
Sbjct: 240 PAARVVGGEAAATAAARARPRAPLAAGSPVPVRPQDAAARSAAGMQPGHGRRPP 293
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 42.7 bits (99), Expect = 1e-04
Identities = 43/151 (28%), Positives = 56/151 (37%), Gaps = 34/151 (22%)
Query: 13 PPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFPGPCAA 72
PP P D R+RR+++ E L+ +R RRRE R +E A CA
Sbjct: 439 PPAPEDEDEAWRQRRKQSSSE-----ISLAVERARRRREEEERRMQEERRAA-----CAE 488
Query: 73 HVA------GAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRGWRPP 126
+ GAP D +A AAP A +T +PPP + A PP
Sbjct: 489 KLKRLDEKFGAP---DKRLKAEPAAPPAAPSTPAPPPAVPKELPA-------------PP 532
Query: 127 GLGREAGPVGGAEPREAGSIAGRPAPHVPRP 157
+ P EP E PA P P
Sbjct: 533 APPPASAPTPETEPEEPAQ--APPAQSTPTP 561
Score = 33.1 bits (74), Expect = 0.11
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 27/121 (22%)
Query: 48 RRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATA---SPPPG 104
+RR +RG E + AP D++ A P T T +PPP
Sbjct: 1099 KRRRQRGSETGSETHESDL----------APSDKE------APTPKEGTLTQVPLAPPPP 1142
Query: 105 SARRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPRE--------AGSIAGRPAPHVPR 156
A + A AR GR + P G+ G GG P + A S+A + P P
Sbjct: 1143 GAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPL 1202
Query: 157 P 157
P
Sbjct: 1203 P 1203
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 42.7 bits (99), Expect = 1e-04
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 10/154 (6%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRR-----RERRGER 56
A RRR ++R P P + L R R + GR P+ + R +R ER
Sbjct: 402 APRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKER 461
Query: 57 EADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVAR-H 115
A++ P P A G PE + + PH + ++S P +R +A R H
Sbjct: 462 PPRARPASTSPSPGAHGRRGGPEGKSSSR---SPGPHPRSWSSSRSPSKSRSRSAEKRPH 518
Query: 116 AGSEGRGWRPPGLGREAGPVGGAEPREAGSIAGR 149
+ S + P L R+ G A EA + R
Sbjct: 519 SPSRSPSPKKP-LSRDKDGEGRARHSEAEATRAR 551
Score = 40.4 bits (93), Expect = 7e-04
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 44/149 (29%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEG 61
A RRR ++R ++A P RR RRR R +P R + R R +D G
Sbjct: 383 AGRRRRRRRRRRRSRSSASAPRRRGRRRP---------RPAPPRGSSRSLSRARSSSDSG 433
Query: 62 EATSFPGPCAAHVAGAPEDEDDE------EQAVAAAPHAHTATASPPPGSARRAAAVARH 115
PGP PE + ++A P A A+ SP PG+
Sbjct: 434 SGRGAPGP-------GPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAH--------- 477
Query: 116 AGSEGRGWRPPGLGREAGPVGGAEPREAG 144
GR GP G + R G
Sbjct: 478 -------------GRRGGPEGKSSSRSPG 493
Score = 35.0 bits (79), Expect = 0.030
Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 21/158 (13%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEE----------DGRSGFRLSPQRRTRRRE 51
+K +R +K + P R R +G D RS RLSP+ R R+
Sbjct: 229 SKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRK 288
Query: 52 RRGEREADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAA 111
+R + + P P G+P+ Q A + SPP + +
Sbjct: 289 TGSQRSS----GSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPR 344
Query: 112 VARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAGR 149
V A + PP G+E+ PR A S GR
Sbjct: 345 VRDKAAAAAP--TPPARGKES-----PSPRSAPSSQGR 375
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 42.7 bits (99), Expect = 1e-04
Identities = 55/189 (29%), Positives = 64/189 (33%), Gaps = 41/189 (21%)
Query: 7 PKKRESPPE---------PAAADTPLRRRRRRA--------GEEDGRSGFRLSPQRRTRR 49
P+ +PPE P+A D P R + A EE G G P+R
Sbjct: 407 PEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAET 466
Query: 50 RERRG-----EREADEGEATSFPGP-----CAAHVAGAPEDEDDEEQAVAAAPHAHTATA 99
RG ER E P P C H A + +AAA +
Sbjct: 467 EPERGAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAA---ESPPV 523
Query: 100 SPPPGSARRAAAVARHAGSEGRGWRPPGLGREAGPV-----GGAEPREA-----GSIAGR 149
P PGS AA +E R PP A P GGAE R A S R
Sbjct: 524 EPGPGSLDAEAAAPERPKAE-RAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRAR 582
Query: 150 PAPHVPRPL 158
P P V RPL
Sbjct: 583 PRPGVSRPL 591
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 3 KRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGE 62
KRRR ++ SPP ++ + RR R R DG S +++ R R R +R D E
Sbjct: 605 KRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGG----SKKKKKRSRSRGEKRSGDGSE 660
Query: 63 ATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRG 122
P P +G+ D + + A P + + +R V R S+ RG
Sbjct: 661 KAPAPAP---PPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKSDPRG 717
Query: 123 WRP 125
P
Sbjct: 718 PSP 720
Score = 31.6 bits (70), Expect = 0.33
Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 15/116 (12%)
Query: 6 RPKKRESPPEPAAADTP--LRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEA 63
R K S P P AA P L + P+ T RG E +E E
Sbjct: 969 RAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEE 1028
Query: 64 TSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSE 119
E+E++EE+ A T+TA+ P +A A + A +G+E
Sbjct: 1029 EE-------------EEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAE 1071
Score = 30.4 bits (67), Expect = 0.73
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 4 RRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEA 63
+RR + R+ P PA A P AG P R+ RRER+ EA E A
Sbjct: 489 QRRERYRQRSPSPAPAPAPAAA----AGP----------PTRKKSRRERKRSGEAKEA-A 533
Query: 64 TSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR-RAAAVARHAGSEGR 121
+S G A A A + + ++ P +H ++++ +R R+ + R + S R
Sbjct: 534 SSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDR 592
Score = 29.6 bits (65), Expect = 1.2
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 7/134 (5%)
Query: 16 PAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFP----GPC- 70
P + + + +AG + + + +TR++ R G G S C
Sbjct: 892 PGSTKPKKTKVKAKAGAKKTKGTKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCS 951
Query: 71 -AAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARR-AAAVARHAGSEGRGWRPPGL 128
AA GA E E+ A P A+PPP + + V + + P
Sbjct: 952 QAAGTKGAEETSWSGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEA 1011
Query: 129 GREAGPVGGAEPRE 142
EAG GGAE E
Sbjct: 1012 TEEAGVRGGAEEEE 1025
Score = 28.9 bits (63), Expect = 2.1
Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 27/133 (20%)
Query: 5 RRPKKRESPPEPAAADTPLRR----------RRRRAGEEDGRSGFRLSPQRRTRRRERR- 53
++ + R+ P A+ + RR RRR + R G R S R RRR RR
Sbjct: 553 KKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRS 612
Query: 54 ------------GEREADEGEATSFPG----PCAAHVAGAPEDEDDEEQAVAAAPHAHTA 97
RE G+ G + G D E+A A AP +
Sbjct: 613 ASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGS 672
Query: 98 TASPPPGSARRAA 110
T+ S RR A
Sbjct: 673 TSCGDRDSRRRGA 685
Score = 27.3 bits (59), Expect = 6.2
Identities = 38/168 (22%), Positives = 55/168 (32%), Gaps = 38/168 (22%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRE-----RRGER 56
AK + P P A +P ++ R+ + S S +RR+R R RR R
Sbjct: 529 AKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSR 588
Query: 57 EADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPG-SARRAAAVARH 115
D G+ E++ +ASPPP S+ ++ RH
Sbjct: 589 STDRRR------------GGSRRSRSREKR------RRRRRSASPPPATSSSSSSRRERH 630
Query: 116 AG--------------SEGRGWRPPGLGREAGPVGGAEPREAGSIAGR 149
G S RG + G G E P P + S R
Sbjct: 631 RGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDR 678
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 40.8 bits (94), Expect = 5e-04
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 8/142 (5%)
Query: 3 KRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGE 62
+++ K R+ P A LRR R G+ + RS + S +R+ ++ ER G+R G
Sbjct: 179 RKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAER-GDRLPPPGP 237
Query: 63 ATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRG 122
+ P + E+E++EE+ P P A R A G
Sbjct: 238 PQAPPSDTDSEEEEEEEEEEEEEEMATVVGGEAPVPVLPTPPEAPRPPATVHPEG----- 292
Query: 123 WRPPGLGREAGPVGGAEPREAG 144
P E+ VG E + G
Sbjct: 293 --VPPADSESKEVGSTETSQDG 312
>gi|24233572 zinc finger protein 367 [Homo sapiens]
Length = 350
Score = 39.3 bits (90), Expect = 0.002
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 93 HAHTATASPPPGSARR-----AAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAGS 145
+AH T SP A AAA A H+G GRG PP A GG + EA S
Sbjct: 76 NAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASAAASGGEDEEEASS 133
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 39.3 bits (90), Expect = 0.002
Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 29/158 (18%)
Query: 7 PKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRL-SPQRRTRRRERRGEREADEGEATS 65
P K E PA P G + G++G ++ SP+++ R+ +G + E
Sbjct: 9 PDKLEGGGGPAPPPAP-----PSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEFAP 63
Query: 66 FPGPCAAHVAGAPEDEDD---EEQAVAAAPHAHTATASPPP-GSARRAAAVARHAGSEGR 121
P P H+ + EDD + VAA P SP P G R +A
Sbjct: 64 PPTPMVDHLVASNPFEDDFGAPKVGVAAPPF----LGSPVPFGGFRVQGGMA-------- 111
Query: 122 GWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRPLG 159
G PPG G GG +P + +P P P P+G
Sbjct: 112 GQVPPGYSTGGG--GGPQP-----LRRQPPPFPPNPMG 142
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 92 PHAHTATASPPPGSARRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPRE--AGSIAGR 149
P A A PPP A+A A +G PPGL GP GGA AGS A
Sbjct: 76 PPATAAPPPPPPPPPPPASAAAPASGPPA----PPGLAAGPGPAGGAPTPALVAGSSAAA 131
Query: 150 PAPHVPRPLGGEE 162
P PH L +E
Sbjct: 132 PFPHGDSALNEQE 144
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.003
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 13 PPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFPGPCA- 71
PP AAA + R R GRS R +RR RRR RRGER A E C
Sbjct: 190 PPSQAAAFS--LRHSRAQPWPSGRSAARR--RRRLRRRRRRGERAAAAAEFGLGGRTCVW 245
Query: 72 ----------AHVAGAPEDEDDEEQAVAAA---PHAHTATASPPPGSARRAAAVA 113
A +A AP + V+ A P H A+ +P G+ R A A A
Sbjct: 246 QGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.003
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 13 PPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFPGPCA- 71
PP AAA + R R GRS R +RR RRR RRGER A E C
Sbjct: 190 PPSQAAAFS--LRHSRAQPWPSGRSAARR--RRRLRRRRRRGERAAAAAEFGLGGRTCVW 245
Query: 72 ----------AHVAGAPEDEDDEEQAVAAA---PHAHTATASPPPGSARRAAAVA 113
A +A AP + V+ A P H A+ +P G+ R A A A
Sbjct: 246 QGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.003
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 13 PPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSFPGPCA- 71
PP AAA + R R GRS R +RR RRR RRGER A E C
Sbjct: 190 PPSQAAAFS--LRHSRAQPWPSGRSAARR--RRRLRRRRRRGERAAAAAEFGLGGRTCVW 245
Query: 72 ----------AHVAGAPEDEDDEEQAVAAA---PHAHTATASPPPGSARRAAAVA 113
A +A AP + V+ A P H A+ +P G+ R A A A
Sbjct: 246 QGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 38.5 bits (88), Expect = 0.003
Identities = 49/164 (29%), Positives = 58/164 (35%), Gaps = 41/164 (25%)
Query: 7 PKKRESPPEPAAADTPLRRRRRRAGE----------EDGRSGFRLSPQRRTRRRERRGER 56
P++R + A D P R RRR+ E + G G R SP RRR G R
Sbjct: 433 PERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPPGSPRRRPGPGPR 492
Query: 57 EA------DEGEATSF----------PGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATAS 100
A D T+F PGP A A AP+ D E A
Sbjct: 493 SASASLLPDAFALTAFECEPQALRRPPGPFPAAPA-APDGADPGE-------------AP 538
Query: 101 PPPGSARRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAG 144
PP SA+R+ A S RP GL G GG G
Sbjct: 539 TPPSSAQRSPGPRPSAHSHAGSLRP-GLSASWGEPGGLRAAGGG 581
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 38.5 bits (88), Expect = 0.003
Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 25/177 (14%)
Query: 1 MAKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRL----SPQRRTRRRERRGER 56
+ +RRRP+++ES + A R R+ + E + L +RR RRERR ER
Sbjct: 2243 LPRRRRPERQESVDQSEEAARRRRPERQESAEHEAAHSLTLGRYEQMERRRERRERRLER 2302
Query: 57 EADEGEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASP-----PPG------- 104
+ + G A D ++ Q A P + P PPG
Sbjct: 2303 QESSEQEMPIRGDLVKGKA-TLADIVEQLQEKEAGPGLPAGPSLPQPRELPPGRLPNGLE 2361
Query: 105 ----SARRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAGRPAPHVPRP 157
+ R AR R RP RE G GG+ + G AP P P
Sbjct: 2362 LPERTPRPDRPRARDRPKPRRRPRP----REGGEGGGSRRSRSAPAQGGSAPAPPPP 2414
>gi|88900495 HCF-binding transcription factor Zhangfei [Homo
sapiens]
Length = 354
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 7 PKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGEATSF 66
P + ESP A P R AGEE+ + SP R+ ++ DEGE +
Sbjct: 17 PTRSESPEPAATCSLPSDLTRAAAGEEETAAAG--SPGRK--------QQFGDEGELEAG 66
Query: 67 PGPCAAHVAGAPEDEDDEEQAVAAAPHAHT 96
G AP E+ EE+A+A+ P T
Sbjct: 67 RGSRGGVAVRAPSPEEMEEEAIASLPGEET 96
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 37.7 bits (86), Expect = 0.005
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEG 61
+KR+ P +R SPP A PL +ED G LSP R + R D
Sbjct: 392 SKRQPPLRRHSPPGRAPR-RPLLEGGGFFEDEDTSEGSELSPASSLRSQRR---YSTDSS 447
Query: 62 EATSFPGPCAAH-VAGAPEDE---DDEEQAVAAAPHAHTAT-ASPPPGSARRAAAVARHA 116
+TS P ++ AG P E+ A P T +P SA+ A V
Sbjct: 448 SSTSCYSPESSRGAAGGPRKRRAPHGAEEGTAVPPKRPYGTQRTPSTASAKTHARVLSMD 507
Query: 117 GSEGRGWRPPGLGREA 132
G+ G RPP G +A
Sbjct: 508 GAGGDVLRPPLAGCKA 523
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 37.7 bits (86), Expect = 0.005
Identities = 32/84 (38%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 61 GEATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSAR-RAAAVARHAGSE 119
GEA P A G EDED+EE AAAP A A+ P G R RAA V S
Sbjct: 1292 GEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGA----AAGPRGPGRARAAPVPVVVSSA 1347
Query: 120 GRGWRPPGLGREAGPVGGAEPREA 143
P G P G EP ++
Sbjct: 1348 DADAARPLRGLLKSPRGADEPEDS 1371
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 37.0 bits (84), Expect = 0.008
Identities = 45/154 (29%), Positives = 53/154 (34%), Gaps = 25/154 (16%)
Query: 3 KRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGE 62
+RRRP E P PA P R R R G L+ ++ RG
Sbjct: 222 RRRRPL--ELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGLWRRKPAP 279
Query: 63 ATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRG 122
G CAA + G + A A A P VA A S GRG
Sbjct: 280 CPR--GACAARLGG---------RGTGRARRAEFRVAGP--------RGVAEEAES-GRG 319
Query: 123 WRP-PGLGREAGPVGGAEPREAGSIAGRPAPHVP 155
WR P +G GG P AG G+ AP P
Sbjct: 320 WRSWPSFSAVSG--GGESPDPAGCSRGKAAPEEP 351
Score = 28.5 bits (62), Expect = 2.8
Identities = 43/180 (23%), Positives = 55/180 (30%), Gaps = 33/180 (18%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEG 61
+ R P+ + P A+ +P R +R E S RT RR
Sbjct: 63 SSRHLPQAKAINPHHTASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRG---------S 113
Query: 62 EATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVAR-----HA 116
EA P A VA + P + +PPP S R R A
Sbjct: 114 EARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPA 173
Query: 117 GSEGRG--------WRPPGLGREAG-----------PVGGAEPREAGSIAGRPAPHVPRP 157
G +G G W+ G E G P A + G RP VPRP
Sbjct: 174 GGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRP 233
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 37.0 bits (84), Expect = 0.008
Identities = 45/154 (29%), Positives = 53/154 (34%), Gaps = 25/154 (16%)
Query: 3 KRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEGE 62
+RRRP E P PA P R R R G L+ ++ RG
Sbjct: 222 RRRRPL--ELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGLWRRKPAP 279
Query: 63 ATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVARHAGSEGRG 122
G CAA + G + A A A P VA A S GRG
Sbjct: 280 CPR--GACAARLGG---------RGTGRARRAEFRVAGP--------RGVAEEAES-GRG 319
Query: 123 WRP-PGLGREAGPVGGAEPREAGSIAGRPAPHVP 155
WR P +G GG P AG G+ AP P
Sbjct: 320 WRSWPSFSAVSG--GGESPDPAGCSRGKAAPEEP 351
Score = 28.5 bits (62), Expect = 2.8
Identities = 43/180 (23%), Positives = 55/180 (30%), Gaps = 33/180 (18%)
Query: 2 AKRRRPKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRTRRRERRGEREADEG 61
+ R P+ + P A+ +P R +R E S RT RR
Sbjct: 63 SSRHLPQAKAINPHHTASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRG---------S 113
Query: 62 EATSFPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSARRAAAVAR-----HA 116
EA P A VA + P + +PPP S R R A
Sbjct: 114 EARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPA 173
Query: 117 GSEGRG--------WRPPGLGREAG-----------PVGGAEPREAGSIAGRPAPHVPRP 157
G +G G W+ G E G P A + G RP VPRP
Sbjct: 174 GGKGEGGGKESAVLWKGAEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRP 233
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 37.0 bits (84), Expect = 0.008
Identities = 39/162 (24%), Positives = 58/162 (35%), Gaps = 21/162 (12%)
Query: 7 PKKRESPPEPAAADTPLRRRRRRAGEEDGRSGFRL-------SPQRRTRRRERRGEREAD 59
P + P PA + P A D R +++ QR+ R R R R +
Sbjct: 501 PSRIPEPESPAKPNVPTASTAPPADSRDRRRSYQMPVRDEESESQRKARSRLMRQSRRST 560
Query: 60 EGEATSFPGPCAAHVAGAPEDEDDEEQA-VAAAPHAHTATASPPPGSARRAAA------- 111
+G + APE E + + P S P A+RA A
Sbjct: 561 QGVTLTDLKEAEKAAGKAPESEKPAQSLDPSRRPRVPGVENSDSP--AQRAEAPDGQGPG 618
Query: 112 --VARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAGRPA 151
AR G+ WR P G EA P ++ E+ ++ G P+
Sbjct: 619 PQAAREHRKVGKEWRGPAEGEEAEPADRSQ--ESSTLEGGPS 658
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 37.0 bits (84), Expect = 0.008
Identities = 39/150 (26%), Positives = 50/150 (33%), Gaps = 27/150 (18%)
Query: 14 PEPAAADTPLRRRRRRAGEEDGRSGFRLSPQRRT--------RRRERRGEREADEGEATS 65
P PA P R A + R LSP+ R E E + +EGE
Sbjct: 60 PSPAEPGAPALRAPAAAAQGQARRAAELSPEERAPPGRPGAPEAAELELEEDEEEGEEAE 119
Query: 66 FPGPCAAHVAGAPEDEDDEEQAVAAAPHAHTA--TASPPPGS------------ARRAAA 111
G +E+D + +P A TA T P GS AR AAA
Sbjct: 120 LDGDLLEEEELEEAEEEDRSSLLLLSPPAATASQTQQIPGGSLGSVLLPAARFDAREAAA 179
Query: 112 VAR-----HAGSEGRGWRPPGLGREAGPVG 136
A + G + +G L GP G
Sbjct: 180 AAAAAGVLYGGDDAQGMMAAMLSHAYGPGG 209
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,512,788
Number of Sequences: 37866
Number of extensions: 618517
Number of successful extensions: 5830
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 704
Number of HSP's that attempted gapping in prelim test: 4430
Number of HSP's gapped (non-prelim): 1872
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.