Guide to the Human Genome
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Name: LOC100132767 Sequence: fasta or formatted (99aa) NCBI GI: 169209840
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {99aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            20.2         20           3
 C cysteine            1.0          1           1
 D aspartate           5.1          5           2
 E glutamate          11.1         11           2
 F phenylalanine       0.0          0           0
 G glycine            11.1         11           1
 H histidine           4.0          4           1
 I isoleucine          0.0          0           0
 K lysine              1.0          1           1
 L leucine             2.0          2           1
 M methionine          1.0          1           1
 N asparagine          0.0          0           0
 P proline             9.1          9           3
 Q glutamine           1.0          1           1
 R arginine           21.2         21           3
 S serine              5.1          5           1
 T threonine           3.0          3           1
 V valine              3.0          3           1
 W tryptophan          1.0          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132767          1.000   PREDICTED: hypothetical protein 
LOC730060             0.633   PREDICTED: hypothetical protein 
LOC730060             0.633   PREDICTED: hypothetical protein 
LOC730060             0.633   PREDICTED: hypothetical protein 
DOT1L                 0.061   DOT1-like, histone H3 methyltransferase 
IRF7                  0.056   interferon regulatory factor 7 isoform b 
LMTK3                 0.056   lemur tyrosine kinase 3 
FLJ37078              0.050   hypothetical protein LOC222183 
SLC4A3                0.044   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.044   solute carrier family 4, anion exchanger, member 3 ...
FBRSL1                0.044   fibrosin-like 1 
GPR153                0.044   G protein-coupled receptor 153 
LOC100292328          0.039   PREDICTED: hypothetical protein 
LOC100292934          0.039   PREDICTED: hypothetical protein 
LOC729240             0.039   PREDICTED: FLJ40296 protein family member 
LOC100291243          0.039   PREDICTED: hypothetical protein XP_002348077 
LOC100287025          0.039   PREDICTED: hypothetical protein 
LOC100287025          0.039   PREDICTED: hypothetical protein XP_002344222 
MCF2L                 0.039   MCF.2 cell line derived transforming sequence-like ...
MCF2L                 0.039   MCF.2 cell line derived transforming sequence-like ...
PRR20                 0.039   proline rich 20 
ZNF541                0.039   zinc finger protein 541 
LOC729250             0.039   hypothetical protein LOC729250 
LOC729246             0.039   hypothetical protein LOC729246 
LOC729240             0.039   hypothetical protein LOC729240 
LOC729233             0.039   hypothetical protein LOC729233 
MEPCE                 0.039   bin3, bicoid-interacting 3 
LOC100127930          0.039   PREDICTED: hypothetical protein 
LOC100127930          0.039   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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